RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 VIPR1P32241 457 aa14.27□□□□□ -0.13
DDX55-209ENST00000542286 CBSP35520 551 aa14.27□□□□□ -0.13
DDX55-209ENST00000542286 PPM1AP35813 382 aa14.27□□□□□ -0.13
DDX55-209ENST00000542286 KIR3DL1P43629 444 aa14.27□□□□□ -0.13
DDX55-209ENST00000542286 WNT3P56703 355 aa14.27□□□□□ -0.13
DDX55-209ENST00000542286 TUBA3CQ13748 450 aa14.27□□□□□ -0.13
DDX55-209ENST00000542286 ARHGEF6Q15052 776 aa14.27□□□□□ -0.13
DDX55-209ENST00000542286 INAVAQ3KP66 663 aa14.27□□□□□ -0.13
DDX55-209ENST00000542286 SPATS1Q496A3 300 aa14.27□□□□□ -0.13
DDX55-209ENST00000542286 PARS2Q7L3T8 475 aaKnown RBP14.27□□□□□ -0.13
DDX55-209ENST00000542286 VN1R2Q8NFZ6 395 aa14.27□□□□□ -0.13
DDX55-209ENST00000542286 POF1BQ8WVV4 589 aa14.27□□□□□ -0.13
DDX55-209ENST00000542286 AP2M1Q96CW1 435 aa14.27□□□□□ -0.13
DDX55-209ENST00000542286 RSPRY1Q96DX4 576 aa14.27□□□□□ -0.13
DDX55-209ENST00000542286 CCDC115Q96NT0 180 aa14.27□□□□□ -0.13
DDX55-209ENST00000542286 PKP4Q99569 1192 aa14.27□□□□□ -0.13
DDX55-209ENST00000542286 KCNH6Q9H252 994 aa14.27□□□□□ -0.13
DDX55-209ENST00000542286 STOX2Q9P2F5 926 aaPredicted RBP14.27□□□□□ -0.13
DDX55-209ENST00000542286 ANKMY1Q9P2S6 941 aa14.27□□□□□ -0.13
DDX55-209ENST00000542286 DNAJB9Q9UBS3 223 aa14.27□□□□□ -0.13
DDX55-209ENST00000542286 WARS2Q9UGM6 360 aaKnown RBP14.27□□□□□ -0.13
DDX55-209ENST00000542286 KLHL3Q9UH77 587 aa14.27□□□□□ -0.13
DDX55-209ENST00000542286 XYLBO75191 536 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 BCAS1O75363 584 aaPredicted RBP14.26□□□□□ -0.13
DDX55-209ENST00000542286 EIF2S1P05198 315 aaKnown RBP14.26□□□□□ -0.13
DDX55-209ENST00000542286 HTR1AP08908 422 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 TGM1P22735 817 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 CTNNB1P35222 781 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 PLA2G16P53816 162 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 PPP2R2BQ00005 443 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 CD47Q08722 323 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 AQP6Q13520 282 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 BROXQ5VW32 411 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 ANGPTL8Q6UXH0 198 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 DSG4Q86SJ6 1040 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 GPR149Q86SP6 731 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 LSRQ86X29 649 aaPredicted RBP14.26□□□□□ -0.13
DDX55-209ENST00000542286 CALHM3Q86XJ0 350 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 REM2Q8IYK8 340 aaPredicted RBP14.26□□□□□ -0.13
DDX55-209ENST00000542286 CHPFQ8IZ52 775 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 TMEM132CQ8N3T6 1108 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 OR4K1Q8NGD4 311 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 ASZ1Q8WWH4 475 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 OSBPL10Q9BXB5 764 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 SGK2Q9HBY8 427 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 A0A096LPI6 279 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 CLIC1O00299 241 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 TOR1BO14657 336 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 FTH1P02794 183 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 OPN1SWP03999 348 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 ELFN1P0C7U0 828 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 HOXB9P17482 250 aaPredicted RBP14.26□□□□□ -0.13
DDX55-209ENST00000542286 IMPA1P29218 277 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 SLC6A11P48066 632 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 VLDLRP98155 873 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 MC1RQ01726 317 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 DMPKQ09013 629 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 TMEM115Q12893 351 aaPredicted RBP14.26□□□□□ -0.13
DDX55-209ENST00000542286 STARD3Q14849 445 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 HENMT1Q5T8I9 393 aaKnown RBP14.26□□□□□ -0.13
DDX55-209ENST00000542286 CRTC3Q6UUV7 619 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 ZNF852Q6ZMS4 543 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 ARMCX6Q7L4S7 300 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 TMPRSS11BQ86T26 416 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 CYP4Z1Q86W10 505 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 ANKRD13BQ86YJ7 626 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 PLPP6Q8IY26 295 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 MMP21Q8N119 569 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 L3MBTL4Q8NA19 623 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 NEIL2Q969S2 332 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 SDCCAG3Q96C92 435 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 CMTM7Q96FZ5 175 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 TPD52L3Q96J77 140 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 IL17FQ96PD4 163 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 ACAT2Q9BWD1 397 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 CCDC90BQ9GZT6 254 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 SPNS1Q9H2V7 528 aa14.26□□□□□ -0.13
DDX55-209ENST00000542286 PAK1IP1Q9NWT1 392 aaPredicted RBP14.26□□□□□ -0.13
DDX55-209ENST00000542286 NINQ8N4C6 2090 aa14.25□□□□□ -0.13
DDX55-209ENST00000542286 GRXCR2A6NFK2 248 aa14.25□□□□□ -0.13
DDX55-209ENST00000542286 JUPP14923 745 aa14.25□□□□□ -0.13
DDX55-209ENST00000542286 POLR2LP62875 67 aaKnown RBP14.25□□□□□ -0.13
DDX55-209ENST00000542286 LAIR1Q6GTX8 287 aa14.25□□□□□ -0.13
DDX55-209ENST00000542286 PDE12Q6L8Q7 609 aaKnown RBP14.25□□□□□ -0.13
DDX55-209ENST00000542286 ZDHHC21Q8IVQ6 265 aa14.25□□□□□ -0.13
DDX55-209ENST00000542286 CFAP206Q8IYR0 622 aa14.25□□□□□ -0.13
DDX55-209ENST00000542286 MINDY2Q8NBR6 621 aa14.25□□□□□ -0.13
DDX55-209ENST00000542286 ZNF740Q8NDX6 193 aa14.25□□□□□ -0.13
DDX55-209ENST00000542286 TMEM159Q96B96 161 aa14.25□□□□□ -0.13
DDX55-209ENST00000542286 SORBS1Q9BX66 1292 aaKnown RBP14.25□□□□□ -0.13
DDX55-209ENST00000542286 WDR12Q9GZL7 423 aaKnown RBP14.25□□□□□ -0.13
DDX55-209ENST00000542286 OR2AG1Q9H205 316 aa14.25□□□□□ -0.13
DDX55-209ENST00000542286 AASDHPPTQ9NRN7 309 aa14.25□□□□□ -0.13
DDX55-209ENST00000542286 TMEFF2Q9UIK5 374 aaPredicted RBP14.25□□□□□ -0.13
DDX55-209ENST00000542286 PCM1Q15154 2024 aa14.25□□□□□ -0.13
DDX55-209ENST00000542286 CCDC88CQ9P219 2028 aa14.25□□□□□ -0.13
DDX55-209ENST00000542286 PRRT4C9JH25 899 aa14.25□□□□□ -0.13
DDX55-209ENST00000542286 SCN2BO60939 215 aa14.25□□□□□ -0.13
DDX55-209ENST00000542286 NRIP1P48552 1158 aa14.25□□□□□ -0.13
DDX55-209ENST00000542286 NDUFA5Q16718 116 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms