RNA–Protein interactions for RNA: ENST00000542136.1

TNFSF13B-206, Transcript of TNF superfamily member 13b, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13B, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-206ENST00000542136 C1GALT1C1LP0DN25 315 aa13.12□□□□□ -0.31
TNFSF13B-206ENST00000542136 SFTPCP11686 197 aa13.12□□□□□ -0.31
TNFSF13B-206ENST00000542136 ITGAXP20702 1163 aa13.12□□□□□ -0.31
TNFSF13B-206ENST00000542136 SSPNQ14714 243 aa13.12□□□□□ -0.31
TNFSF13B-206ENST00000542136 TBCCQ15814 346 aa13.12□□□□□ -0.31
TNFSF13B-206ENST00000542136 LRRC70Q7Z2Q7 622 aa13.12□□□□□ -0.31
TNFSF13B-206ENST00000542136 VN1R4Q7Z5H5 301 aa13.12□□□□□ -0.31
TNFSF13B-206ENST00000542136 ENDOVQ8N8Q3 282 aaKnown RBP13.12□□□□□ -0.31
TNFSF13B-206ENST00000542136 TTLQ8NG68 377 aa13.12□□□□□ -0.31
TNFSF13B-206ENST00000542136 OR2Y1Q8NGV0 311 aa13.12□□□□□ -0.31
TNFSF13B-206ENST00000542136 UHMK1Q8TAS1 419 aaKnown RBP13.12□□□□□ -0.31
TNFSF13B-206ENST00000542136 C10orf90Q96M02 699 aa13.12□□□□□ -0.31
TNFSF13B-206ENST00000542136 TMEM79Q9BSE2 394 aa13.12□□□□□ -0.31
TNFSF13B-206ENST00000542136 DRC3Q9H069 523 aa13.12□□□□□ -0.31
TNFSF13B-206ENST00000542136 VPS11Q9H270 941 aa13.12□□□□□ -0.31
TNFSF13B-206ENST00000542136 CLK4Q9HAZ1 481 aaKnown RBP13.12□□□□□ -0.31
TNFSF13B-206ENST00000542136 ZNF304Q9HCX3 659 aa13.12□□□□□ -0.31
TNFSF13B-206ENST00000542136 SLC22A11Q9NSA0 550 aa13.12□□□□□ -0.31
TNFSF13B-206ENST00000542136 STARD5Q9NSY2 213 aa13.12□□□□□ -0.31
TNFSF13B-206ENST00000542136 WDR70Q9NW82 654 aa13.12□□□□□ -0.31
TNFSF13B-206ENST00000542136 WWOXQ9NZC7 414 aa13.12□□□□□ -0.31
TNFSF13B-206ENST00000542136 ZFP69BQ9UJL9 534 aa13.12□□□□□ -0.31
TNFSF13B-206ENST00000542136 POLHQ9Y253 713 aa13.12□□□□□ -0.31
TNFSF13B-206ENST00000542136 RUVBL1Q9Y265 456 aaKnown RBP13.12□□□□□ -0.31
TNFSF13B-206ENST00000542136 MDC1Q14676 2089 aaKnown RBP13.12□□□□□ -0.31
TNFSF13B-206ENST00000542136 NBEAQ8NFP9 2946 aa13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 CELSR3Q9NYQ7 3312 aa13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 IGLV3-12A0A075B6K2 115 aa13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 NCF1BA6NI72 391 aaPredicted RBP13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 VSTM2BA6NLU5 285 aa13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 NCF1CA8MVU1 366 aaPredicted RBP13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 H0YIG0 161 aa13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 PCDH17O14917 1159 aa13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 CLGNO14967 610 aa13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 ATXN7O15265 892 aaPredicted RBP13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 OR1F1O43749 312 aa13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 IGHEP01854 428 aa13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 GSTA1P08263 222 aa13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 SLC35G6P0C7Q6 338 aa13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 NCF1P14598 390 aaPredicted RBP13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 BCL6P41182 706 aa13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 GDF5P43026 501 aa13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 SCTRP47872 440 aa13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 VSNL1P62760 191 aa13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 REEP5Q00765 189 aa13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 IRF9Q00978 393 aa13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 LAPTM5Q13571 262 aa13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 DSG2Q14126 1118 aa13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 PCBP2Q15366 365 aaKnown RBP eCLIP13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 TBR1Q16650 682 aa13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 PDK4Q16654 411 aa13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 CATSPEREQ5SY80 951 aa13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 C1orf189Q5VU69 101 aa13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 TMEM214Q6NUQ4 689 aaKnown RBP13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 BORAQ6PGQ7 559 aa13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 ASPGQ86U10 573 aa13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 KRT78Q8N1N4 520 aa13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 NT5CQ8TCD5 201 aa13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 ADAMTS17Q8TE56 1095 aa13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 APOBEC4Q8WW27 367 aaKnown RBP13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 SLC13A3Q8WWT9 602 aa13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 PTCD3Q96EY7 689 aaKnown RBP13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 TSNARE1Q96NA8 513 aa13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 MRPL57Q9BQC6 102 aaKnown RBP13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 EFCAB11Q9BUY7 163 aa13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 UNKQ9C0B0 810 aaKnown RBP13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 TGIF2Q9GZN2 237 aa13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 ADNPQ9H2P0 1102 aa13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 SYNPO2LQ9H987 977 aa13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 NDOR1Q9UHB4 597 aa13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 TUBD1Q9UJT1 453 aa13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 CHD6Q8TD26 2715 aa13.11□□□□□ -0.31
TNFSF13B-206ENST00000542136 FEZF1A0PJY2 475 aa13.1□□□□□ -0.31
TNFSF13B-206ENST00000542136 URADA6NGE7 173 aa13.1□□□□□ -0.31
TNFSF13B-206ENST00000542136 SUPT3HB4E1H0 165 aa13.1□□□□□ -0.31
TNFSF13B-206ENST00000542136 K7EPI3 171 aa13.1□□□□□ -0.31
TNFSF13B-206ENST00000542136 FOXS1O43638 330 aa13.1□□□□□ -0.31
TNFSF13B-206ENST00000542136 SUPT3HO75486 399 aa13.1□□□□□ -0.31
TNFSF13B-206ENST00000542136 NSA2O95478 260 aaKnown RBP13.1□□□□□ -0.31
TNFSF13B-206ENST00000542136 SERPINA6P08185 405 aa13.1□□□□□ -0.31
TNFSF13B-206ENST00000542136 CYC1P08574 325 aa13.1□□□□□ -0.31
TNFSF13B-206ENST00000542136 NUDT17P0C025 328 aa13.1□□□□□ -0.31
TNFSF13B-206ENST00000542136 HPDP32754 393 aaPredicted RBP13.1□□□□□ -0.31
TNFSF13B-206ENST00000542136 PIK3CGP48736 1102 aa13.1□□□□□ -0.31
TNFSF13B-206ENST00000542136 HSPA7P48741 367 aa13.1□□□□□ -0.31
TNFSF13B-206ENST00000542136 SKP1P63208 163 aa13.1□□□□□ -0.31
TNFSF13B-206ENST00000542136 ERV3-1Q14264 604 aa13.1□□□□□ -0.31
TNFSF13B-206ENST00000542136 NAA30Q147X3 362 aaPredicted RBP13.1□□□□□ -0.31
TNFSF13B-206ENST00000542136 SETDB1Q15047 1291 aa13.1□□□□□ -0.31
TNFSF13B-206ENST00000542136 HKDC1Q2TB90 917 aa13.1□□□□□ -0.31
TNFSF13B-206ENST00000542136 TECRLQ5HYJ1 363 aa13.1□□□□□ -0.31
TNFSF13B-206ENST00000542136 MLIPQ5VWP3 458 aa13.1□□□□□ -0.31
TNFSF13B-206ENST00000542136 TMIGD1Q6UXZ0 262 aa13.1□□□□□ -0.31
TNFSF13B-206ENST00000542136 PLD3Q8IV08 490 aa13.1□□□□□ -0.31
TNFSF13B-206ENST00000542136 APLFQ8IW19 511 aaPredicted RBP13.1□□□□□ -0.31
TNFSF13B-206ENST00000542136 GSPT2Q8IYD1 628 aaKnown RBP13.1□□□□□ -0.31
TNFSF13B-206ENST00000542136 PLD6Q8N2A8 252 aaKnown RBP13.1□□□□□ -0.31
TNFSF13B-206ENST00000542136 AENQ8WTP8 325 aaKnown RBP13.1□□□□□ -0.31
TNFSF13B-206ENST00000542136 UBLCP1Q8WVY7 318 aaPredicted RBP13.1□□□□□ -0.31
TNFSF13B-206ENST00000542136 CAVIN3Q969G5 261 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms