RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 OR2A25A4D2G3 310 aa14.82□□□□□ -0.04
CNOT9-208ENST00000542068 GRXCR2A6NFK2 248 aa14.82□□□□□ -0.04
CNOT9-208ENST00000542068 SERPINA4P29622 427 aa14.82□□□□□ -0.04
CNOT9-208ENST00000542068 CTSKP43235 329 aa14.82□□□□□ -0.04
CNOT9-208ENST00000542068 LMAN2Q12907 356 aa14.82□□□□□ -0.04
CNOT9-208ENST00000542068 NOGQ13253 232 aa14.82□□□□□ -0.04
CNOT9-208ENST00000542068 VMACQ2NL98 169 aa14.82□□□□□ -0.04
CNOT9-208ENST00000542068 ATP13A5Q4VNC0 1218 aa14.82□□□□□ -0.04
CNOT9-208ENST00000542068 UBE2UQ5VVX9 321 aa14.82□□□□□ -0.04
CNOT9-208ENST00000542068 LHX8Q68G74 356 aa14.82□□□□□ -0.04
CNOT9-208ENST00000542068 FAM180BQ6P0A1 224 aa14.82□□□□□ -0.04
CNOT9-208ENST00000542068 GPR26Q8NDV2 337 aa14.82□□□□□ -0.04
CNOT9-208ENST00000542068 FEVQ99581 238 aa14.82□□□□□ -0.04
CNOT9-208ENST00000542068 COPS8Q99627 209 aa14.82□□□□□ -0.04
CNOT9-208ENST00000542068 TSEN34Q9BSV6 310 aaKnown RBP14.82□□□□□ -0.04
CNOT9-208ENST00000542068 SH3BP4Q9P0V3 963 aa14.82□□□□□ -0.04
CNOT9-208ENST00000542068 TFECO14948 347 aaPredicted RBP14.82□□□□□ -0.04
CNOT9-208ENST00000542068 CCNKO75909 580 aa14.82□□□□□ -0.04
CNOT9-208ENST00000542068 IGSF6O95976 241 aa14.82□□□□□ -0.04
CNOT9-208ENST00000542068 LRG1P02750 347 aa14.82□□□□□ -0.04
CNOT9-208ENST00000542068 EBLN1P0CF75 366 aa14.82□□□□□ -0.04
CNOT9-208ENST00000542068 ZNF24P17028 368 aa14.82□□□□□ -0.04
CNOT9-208ENST00000542068 GZMMP51124 257 aa14.82□□□□□ -0.04
CNOT9-208ENST00000542068 CLDN8P56748 225 aa14.82□□□□□ -0.04
CNOT9-208ENST00000542068 TLE2Q04725 743 aa14.82□□□□□ -0.04
CNOT9-208ENST00000542068 PLEKHG6Q3KR16 790 aa14.82□□□□□ -0.04
CNOT9-208ENST00000542068 CAPN13Q6MZZ7 669 aaPredicted RBP14.82□□□□□ -0.04
CNOT9-208ENST00000542068 SERPINA13PQ6UXR4 307 aa14.82□□□□□ -0.04
CNOT9-208ENST00000542068 OTOP2Q7RTS6 562 aa14.82□□□□□ -0.04
CNOT9-208ENST00000542068 CALHM3Q86XJ0 350 aa14.82□□□□□ -0.04
CNOT9-208ENST00000542068 UBE2J2Q8N2K1 259 aa14.82□□□□□ -0.04
CNOT9-208ENST00000542068 NELL1Q92832 810 aa14.82□□□□□ -0.04
CNOT9-208ENST00000542068 CEP19Q96LK0 163 aa14.82□□□□□ -0.04
CNOT9-208ENST00000542068 YME1L1Q96TA2 773 aa14.82□□□□□ -0.04
CNOT9-208ENST00000542068 PSD2Q9BQI7 771 aa14.82□□□□□ -0.04
CNOT9-208ENST00000542068 KIAA1522Q9P206 1035 aaPredicted RBP14.82□□□□□ -0.04
CNOT9-208ENST00000542068 RHCGQ9UBD6 479 aa14.82□□□□□ -0.04
CNOT9-208ENST00000542068 TRBV5-3A0A0A0MS03 114 aa14.81□□□□□ -0.04
CNOT9-208ENST00000542068 M0R082 166 aa14.81□□□□□ -0.04
CNOT9-208ENST00000542068 CCL16O15467 120 aa14.81□□□□□ -0.04
CNOT9-208ENST00000542068 LAMP1P11279 417 aa14.81□□□□□ -0.04
CNOT9-208ENST00000542068 RECQLP46063 649 aaPredicted RBP14.81□□□□□ -0.04
CNOT9-208ENST00000542068 DGKKQ5KSL6 1271 aa14.81□□□□□ -0.04
CNOT9-208ENST00000542068 SLC8B1Q6J4K2 584 aa14.81□□□□□ -0.04
CNOT9-208ENST00000542068 PARP16Q8N5Y8 322 aa14.81□□□□□ -0.04
CNOT9-208ENST00000542068 APH1BQ8WW43 257 aa14.81□□□□□ -0.04
CNOT9-208ENST00000542068 KLF16Q9BXK1 252 aaPredicted RBP14.81□□□□□ -0.04
CNOT9-208ENST00000542068 TPK1Q9H3S4 243 aa14.81□□□□□ -0.04
CNOT9-208ENST00000542068 MAGIXQ9H6Y5 334 aa14.81□□□□□ -0.04
CNOT9-208ENST00000542068 BTBD3Q9Y2F9 522 aa14.81□□□□□ -0.04
CNOT9-208ENST00000542068 TMED5Q9Y3A6 229 aa14.81□□□□□ -0.04
CNOT9-208ENST00000542068 PCDHB1Q9Y5F3 818 aa14.81□□□□□ -0.04
CNOT9-208ENST00000542068 TRPM7Q96QT4 1865 aa14.81□□□□□ -0.04
CNOT9-208ENST00000542068 SMIM30A4D0T7 59 aa14.81□□□□□ -0.04
CNOT9-208ENST00000542068 AGAP5A6NIR3 686 aa14.81□□□□□ -0.04
CNOT9-208ENST00000542068 MAGEB17A8MXT2 336 aa14.81□□□□□ -0.04
CNOT9-208ENST00000542068 CTDSP2O14595 271 aa14.81□□□□□ -0.04
CNOT9-208ENST00000542068 WNT9AO14904 365 aa14.81□□□□□ -0.04
CNOT9-208ENST00000542068 KCNK5O95279 499 aa14.81□□□□□ -0.04
CNOT9-208ENST00000542068 CDH12P55289 794 aa14.81□□□□□ -0.04
CNOT9-208ENST00000542068 IL18R1Q13478 541 aa14.81□□□□□ -0.04
CNOT9-208ENST00000542068 TTLL9Q3SXZ7 439 aa14.81□□□□□ -0.04
CNOT9-208ENST00000542068 PRSS48Q7RTY5 328 aa14.81□□□□□ -0.04
CNOT9-208ENST00000542068 CYP2U1Q7Z449 544 aa14.81□□□□□ -0.04
CNOT9-208ENST00000542068 TCAIMQ8N3R3 496 aa14.81□□□□□ -0.04
CNOT9-208ENST00000542068 NDRG4Q9ULP0 352 aaKnown RBP14.81□□□□□ -0.04
CNOT9-208ENST00000542068 TMA7Q9Y2S6 64 aaKnown RBP14.81□□□□□ -0.04
CNOT9-208ENST00000542068 VWA8A3KMH1 1905 aa14.81□□□□□ -0.04
CNOT9-208ENST00000542068 AP3D1O14617 1153 aa14.81□□□□□ -0.04
CNOT9-208ENST00000542068 YY2O15391 372 aa14.81□□□□□ -0.04
CNOT9-208ENST00000542068 PTHP01270 115 aa14.81□□□□□ -0.04
CNOT9-208ENST00000542068 IGHA2P01877 340 aa14.81□□□□□ -0.04
CNOT9-208ENST00000542068 CRATP43155 626 aa14.81□□□□□ -0.04
CNOT9-208ENST00000542068 PPP3CCP48454 512 aa14.81□□□□□ -0.04
CNOT9-208ENST00000542068 SMARCB1Q12824 385 aa14.81□□□□□ -0.04
CNOT9-208ENST00000542068 DEFB115Q30KQ5 88 aa14.81□□□□□ -0.04
CNOT9-208ENST00000542068 LRIT3Q3SXY7 679 aa14.81□□□□□ -0.04
CNOT9-208ENST00000542068 ARMCX4Q5H9R4 360 aa14.81□□□□□ -0.04
CNOT9-208ENST00000542068 NOXRED1Q6NXP6 359 aa14.81□□□□□ -0.04
CNOT9-208ENST00000542068 METTL4Q8N3J2 472 aa14.81□□□□□ -0.04
CNOT9-208ENST00000542068 C2orf73Q8N5S3 287 aaPredicted RBP14.81□□□□□ -0.04
CNOT9-208ENST00000542068 PIH1D2Q8WWB5 315 aa14.81□□□□□ -0.04
CNOT9-208ENST00000542068 ZNF558Q96NG5 402 aa14.81□□□□□ -0.04
CNOT9-208ENST00000542068 TMEM121BQ9BXQ6 578 aaPredicted RBP14.81□□□□□ -0.04
CNOT9-208ENST00000542068 IMPAD1Q9NX62 359 aa14.81□□□□□ -0.04
CNOT9-208ENST00000542068 OSGIN1Q9UJX0 560 aa14.81□□□□□ -0.04
CNOT9-208ENST00000542068 PTPRDP23468 1912 aa14.8□□□□□ -0.04
CNOT9-208ENST00000542068 M0QX08 132 aa14.8□□□□□ -0.04
CNOT9-208ENST00000542068 TRBC1P01850 177 aa14.8□□□□□ -0.04
CNOT9-208ENST00000542068 GRK3P35626 688 aa14.8□□□□□ -0.04
CNOT9-208ENST00000542068 SPAM1P38567 509 aa14.8□□□□□ -0.04
CNOT9-208ENST00000542068 CHIT1Q13231 466 aa14.8□□□□□ -0.04
CNOT9-208ENST00000542068 GANABQ14697 944 aaKnown RBP14.8□□□□□ -0.04
CNOT9-208ENST00000542068 TAB1Q15750 504 aa14.8□□□□□ -0.04
CNOT9-208ENST00000542068 ZXDCQ2QGD7 858 aaPredicted RBP14.8□□□□□ -0.04
CNOT9-208ENST00000542068 DEPDC1Q5TB30 811 aa14.8□□□□□ -0.04
CNOT9-208ENST00000542068 TRIM46Q7Z4K8 759 aa14.8□□□□□ -0.04
CNOT9-208ENST00000542068 TSPYL5Q86VY4 417 aaPredicted RBP14.8□□□□□ -0.04
CNOT9-208ENST00000542068 ZSWIM9Q86XI8 627 aa14.8□□□□□ -0.04
CNOT9-208ENST00000542068 ZZZ3Q8IYH5 903 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms