RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 CSTF3Q12996 717 aaKnown RBP9.21□□□□□ -0.94
CNOT4-212ENST00000541284 DEFB115Q30KQ5 88 aa9.21□□□□□ -0.94
CNOT4-212ENST00000541284 CCSMST1Q4G0I0 132 aa9.21□□□□□ -0.94
CNOT4-212ENST00000541284 DNAJC11Q9NVH1 559 aa9.21□□□□□ -0.94
CNOT4-212ENST00000541284 PSORS1C1Q9UIG5 152 aa9.21□□□□□ -0.94
CNOT4-212ENST00000541284 SLC6A14Q9UN76 642 aa9.21□□□□□ -0.94
CNOT4-212ENST00000541284 PADI2Q9Y2J8 665 aa9.21□□□□□ -0.94
CNOT4-212ENST00000541284 PCDHB11Q9Y5F2 797 aa9.21□□□□□ -0.94
CNOT4-212ENST00000541284 MYOFQ9NZM1 2061 aa9.21□□□□□ -0.94
CNOT4-212ENST00000541284 PCM1Q15154 2024 aa9.21□□□□□ -0.94
CNOT4-212ENST00000541284 MAGEB17A8MXT2 336 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 E7EQ34 232 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 SLC16A5O15375 505 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 PARNO95453 639 aaKnown RBP9.2□□□□□ -0.94
CNOT4-212ENST00000541284 ABRQ12979 859 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 SP140Q13342 867 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 CAMK2GQ13555 558 aaPredicted RBP9.2□□□□□ -0.94
CNOT4-212ENST00000541284 DNASE1L3Q13609 305 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 TRIM16LQ309B1 348 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 ZNF658BQ4V348 819 aaPredicted RBP9.2□□□□□ -0.94
CNOT4-212ENST00000541284 ZNF385BQ569K4 471 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 PAGE2BQ5JRK9 111 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 LRRC73Q5JTD7 316 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 PLEKHG7Q6ZR37 379 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 NCCRP1Q6ZVX7 275 aaPredicted RBP9.2□□□□□ -0.94
CNOT4-212ENST00000541284 FIBINQ8TAL6 211 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 PUM2Q8TB72 1066 aaKnown RBP eCLIP9.2□□□□□ -0.942e-6■■■□□ 18.8
CNOT4-212ENST00000541284 CSGALNACT1Q8TDX6 532 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 S100ZQ8WXG8 99 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 MAL2Q969L2 176 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 SH3KBP1Q96B97 665 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 PANX1Q96RD7 426 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 RSPO3Q9BXY4 272 aaPredicted RBP9.2□□□□□ -0.94
CNOT4-212ENST00000541284 ATG10Q9H0Y0 220 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 DSN1Q9H410 356 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 RASSF1Q9NS23 344 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 PLCXD1Q9NUJ7 323 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 RLIMQ9NVW2 624 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 FAM120CQ9NX05 1096 aaKnown RBP9.2□□□□□ -0.94
CNOT4-212ENST00000541284 SAMHD1Q9Y3Z3 626 aaKnown RBP9.2□□□□□ -0.94
CNOT4-212ENST00000541284 ZNF451Q9Y4E5 1061 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 PCDHGA2Q9Y5H1 932 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 METTL15A6NJ78 407 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 GABRR3A8MPY1 467 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 SCAMP2O15127 329 aaKnown RBP9.2□□□□□ -0.94
CNOT4-212ENST00000541284 VIPP01282 170 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 C9P02748 559 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 GRK3P35626 688 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 MAPK8P45983 427 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 PPP3CCP48454 512 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 SPINT3P49223 89 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 HSPA14Q0VDF9 509 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 CHIT1Q13231 466 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 DGCR6Q14129 220 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 PRSS53Q2L4Q9 553 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 TPGS2Q68CL5 300 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 RETSATQ6NUM9 610 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 ZNF852Q6ZMS4 543 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 GAREM2Q75VX8 874 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 CPXM2Q8N436 756 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 ZNF540Q8NDQ6 660 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 RHOXF1Q8NHV9 184 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 STARD7Q9NQZ5 370 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 KRT84Q9NSB2 600 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 QPCTLQ9NXS2 382 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 ZNF226Q9NYT6 803 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 NDUFAF4Q9P032 175 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 ORC6Q9Y5N6 252 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 LYVE1Q9Y5Y7 322 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 ARHGEF33A8MVX0 844 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 MYO1GB0I1T2 1018 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 COQ9O75208 318 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 MTX2O75431 263 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 IDSP22304 550 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 PSMB9P28065 219 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 MAPK1P28482 360 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 C21orf33P30042 268 aaPredicted RBP9.2□□□□□ -0.94
CNOT4-212ENST00000541284 UGT2B10P36537 528 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 LIMS1P48059 325 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 CRISP3P54108 245 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 SRSF11Q05519 484 aaKnown RBP9.2□□□□□ -0.94
CNOT4-212ENST00000541284 EEF1A2Q05639 463 aaKnown RBP9.2□□□□□ -0.94
CNOT4-212ENST00000541284 IRF3Q14653 427 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 MPEG1Q2M385 716 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 PLEKHS1Q5SXH7 462 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 ERICH5Q6P6B1 374 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 SLC39A5Q6ZMH5 540 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.2□□□□□ -0.943e-10■■■■■ 29.8
CNOT4-212ENST00000541284 CCDC81Q6ZN84 652 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 HTR3DQ70Z44 454 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 TMC8Q8IU68 726 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 MINDY2Q8NBR6 621 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 GLMNQ92990 594 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 COQ8BQ96D53 544 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 BBS2Q9BXC9 721 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 TPT1P8Q9HAU6 139 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 ZBTB20Q9HC78 741 aaPredicted RBP9.2□□□□□ -0.94
CNOT4-212ENST00000541284 POLE4Q9NR33 117 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 RPS6KA6Q9UK32 745 aa9.2□□□□□ -0.94
CNOT4-212ENST00000541284 HS3ST2Q9Y278 367 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms