RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 IPPKQ9H8X2 491 aa10.19□□□□□ -0.78
ATL3-204ENST00000540699 TCF7L2Q9NQB0 619 aa10.19□□□□□ -0.78
ATL3-204ENST00000540699 SAR1AQ9NR31 198 aa10.19□□□□□ -0.78
ATL3-204ENST00000540699 TRPS1Q9UHF7 1281 aa10.19□□□□□ -0.78
ATL3-204ENST00000540699 ZFP69BQ9UJL9 534 aa10.19□□□□□ -0.78
ATL3-204ENST00000540699 SLC12A4Q9UP95 1085 aa10.19□□□□□ -0.78
ATL3-204ENST00000540699 TDRKHQ9Y2W6 561 aaKnown RBP10.19□□□□□ -0.78
ATL3-204ENST00000540699 FIS1Q9Y3D6 152 aa10.19□□□□□ -0.78
ATL3-204ENST00000540699 PTPRQQ9UMZ3 2332 aa10.19□□□□□ -0.78
ATL3-204ENST00000540699 MDC1Q14676 2089 aaKnown RBP10.19□□□□□ -0.78
ATL3-204ENST00000540699 HELZ2Q9BYK8 2649 aaKnown RBP10.19□□□□□ -0.78
ATL3-204ENST00000540699 MGAQ8IWI9 3026 aa10.18□□□□□ -0.78
ATL3-204ENST00000540699 KCNE1BA0A087WTH5 132 aa10.18□□□□□ -0.78
ATL3-204ENST00000540699 GOLGA8QA0A0J9YX86 632 aa10.18□□□□□ -0.78
ATL3-204ENST00000540699 GOLGA8OA6NCC3 632 aa10.18□□□□□ -0.78
ATL3-204ENST00000540699 TLCD2A6NGC4 264 aa10.18□□□□□ -0.78
ATL3-204ENST00000540699 EIF4E1BA6NMX2 242 aaKnown RBP10.18□□□□□ -0.78
ATL3-204ENST00000540699 CAPN14A8MX76 684 aa10.18□□□□□ -0.78
ATL3-204ENST00000540699 GOLGA8NF8WBI6 632 aa10.18□□□□□ -0.78
ATL3-204ENST00000540699 PIP5K1BO14986 540 aa10.18□□□□□ -0.78
ATL3-204ENST00000540699 PRAMEF4O60810 478 aa10.18□□□□□ -0.78
ATL3-204ENST00000540699 CCDC22O60826 627 aa10.18□□□□□ -0.78
ATL3-204ENST00000540699 KATNA1O75449 491 aa10.18□□□□□ -0.78
ATL3-204ENST00000540699 WDR47O94967 919 aa10.18□□□□□ -0.78
ATL3-204ENST00000540699 SLC16A8O95907 504 aa10.18□□□□□ -0.78
ATL3-204ENST00000540699 ENO1P06733 434 aaKnown RBP10.18□□□□□ -0.78
ATL3-204ENST00000540699 CHRM5P08912 532 aaPredicted RBP10.18□□□□□ -0.78
ATL3-204ENST00000540699 EBLN1P0CF75 366 aa10.18□□□□□ -0.78
ATL3-204ENST00000540699 EPB42P16452 691 aa10.18□□□□□ -0.78
ATL3-204ENST00000540699 POLR2CP19387 275 aaPredicted RBP10.18□□□□□ -0.78
ATL3-204ENST00000540699 PEBP1P30086 187 aaKnown RBP10.18□□□□□ -0.78
ATL3-204ENST00000540699 HSD17B2P37059 387 aa10.18□□□□□ -0.78
ATL3-204ENST00000540699 MLLT3P42568 568 aaPredicted RBP10.18□□□□□ -0.78
ATL3-204ENST00000540699 CCNG1P51959 295 aa10.18□□□□□ -0.78
ATL3-204ENST00000540699 E2F2Q14209 437 aa10.18□□□□□ -0.78
ATL3-204ENST00000540699 KIR2DS3Q14952 304 aa10.18□□□□□ -0.78
ATL3-204ENST00000540699 GGTA1PQ4G0N0 100 aa10.18□□□□□ -0.78
ATL3-204ENST00000540699 XKR7Q5GH72 579 aa10.18□□□□□ -0.78
ATL3-204ENST00000540699 PHF19Q5T6S3 580 aa10.18□□□□□ -0.78
ATL3-204ENST00000540699 PRAMEF9Q5VWM5 478 aa10.18□□□□□ -0.78
ATL3-204ENST00000540699 ACAD11Q709F0 780 aa10.18□□□□□ -0.78
ATL3-204ENST00000540699 CHSY3Q70JA7 882 aa10.18□□□□□ -0.78
ATL3-204ENST00000540699 L3MBTL4Q8NA19 623 aa10.18□□□□□ -0.78
ATL3-204ENST00000540699 WDR36Q8NI36 951 aaKnown RBP10.18□□□□□ -0.78
ATL3-204ENST00000540699 ZNF480Q8WV37 535 aa10.18□□□□□ -0.78
ATL3-204ENST00000540699 C19orf60Q96EN9 201 aa10.18□□□□□ -0.78
ATL3-204ENST00000540699 C3orf30Q96M34 536 aa10.18□□□□□ -0.78
ATL3-204ENST00000540699 RILPQ96NA2 401 aa10.18□□□□□ -0.78
ATL3-204ENST00000540699 TGM7Q96PF1 710 aa10.18□□□□□ -0.78
ATL3-204ENST00000540699 CDK15Q96Q40 435 aa10.18□□□□□ -0.78
ATL3-204ENST00000540699 OR4K3Q96R72 315 aa10.18□□□□□ -0.78
ATL3-204ENST00000540699 SGPP1Q9BX95 441 aa10.18□□□□□ -0.78
ATL3-204ENST00000540699 ATG10Q9H0Y0 220 aa10.18□□□□□ -0.78
ATL3-204ENST00000540699 ZNF768Q9H5H4 540 aaKnown RBP10.18□□□□□ -0.78
ATL3-204ENST00000540699 C1GALT1Q9NS00 363 aa10.18□□□□□ -0.78
ATL3-204ENST00000540699 DNAJC11Q9NVH1 559 aa10.18□□□□□ -0.78
ATL3-204ENST00000540699 INTS7Q9NVH2 962 aaKnown RBP10.18□□□□□ -0.78
ATL3-204ENST00000540699 PLAGL1Q9UM63 463 aa10.18□□□□□ -0.78
ATL3-204ENST00000540699 TIMM22Q9Y584 194 aa10.18□□□□□ -0.78
ATL3-204ENST00000540699 PCDHGA8Q9Y5G5 932 aa10.18□□□□□ -0.78
ATL3-204ENST00000540699 SEC16AO15027 2179 aa10.18□□□□□ -0.78
ATL3-204ENST00000540699 A0A1W2PPV9 198 aa10.17□□□□□ -0.78
ATL3-204ENST00000540699 PIPSLA2A3N6 862 aa10.17□□□□□ -0.78
ATL3-204ENST00000540699 C2orf74A8MZ97 194 aa10.17□□□□□ -0.78
ATL3-204ENST00000540699 E9PBE3 544 aa10.17□□□□□ -0.78
ATL3-204ENST00000540699 KIF1CO43896 1103 aaKnown RBP10.17□□□□□ -0.78
ATL3-204ENST00000540699 KLHL41O60662 606 aa10.17□□□□□ -0.78
ATL3-204ENST00000540699 DXOO77932 396 aaKnown RBP10.17□□□□□ -0.78
ATL3-204ENST00000540699 KIAA0754O94854 1291 aa10.17□□□□□ -0.78
ATL3-204ENST00000540699 FKBP9O95302 570 aa10.17□□□□□ -0.78
ATL3-204ENST00000540699 ZIC2O95409 532 aaPredicted RBP10.17□□□□□ -0.78
ATL3-204ENST00000540699 CAPN1P07384 714 aa10.17□□□□□ -0.78
ATL3-204ENST00000540699 PRR35P0CG20 571 aa10.17□□□□□ -0.78
ATL3-204ENST00000540699 T-ENOLP0DO92 83 aa10.17□□□□□ -0.78
ATL3-204ENST00000540699 LSSP48449 732 aa10.17□□□□□ -0.78
ATL3-204ENST00000540699 HTR6P50406 440 aa10.17□□□□□ -0.78
ATL3-204ENST00000540699 TBPL1P62380 186 aa10.17□□□□□ -0.78
ATL3-204ENST00000540699 NAE1Q13564 534 aa10.17□□□□□ -0.78
ATL3-204ENST00000540699 KRT72Q14CN4 511 aa10.17□□□□□ -0.78
ATL3-204ENST00000540699 SLC5A12Q1EHB4 618 aa10.17□□□□□ -0.78
ATL3-204ENST00000540699 TCHHL1Q5QJ38 904 aaPredicted RBP10.17□□□□□ -0.78
ATL3-204ENST00000540699 IRGCQ6NXR0 463 aa10.17□□□□□ -0.78
ATL3-204ENST00000540699 SPESP1Q6UW49 350 aa10.17□□□□□ -0.78
ATL3-204ENST00000540699 LARP4Q71RC2 724 aaKnown RBP eCLIP10.17□□□□□ -0.78
ATL3-204ENST00000540699 RAB11FIP2Q7L804 512 aa10.17□□□□□ -0.78
ATL3-204ENST00000540699 MILR1Q7Z6M3 343 aa10.17□□□□□ -0.78
ATL3-204ENST00000540699 THOC6Q86W42 341 aaKnown RBP10.17□□□□□ -0.78
ATL3-204ENST00000540699 KMT5CQ86Y97 462 aa10.17□□□□□ -0.78
ATL3-204ENST00000540699 TREML1Q86YW5 311 aa10.17□□□□□ -0.78
ATL3-204ENST00000540699 RAB42Q8N4Z0 105 aa10.17□□□□□ -0.78
ATL3-204ENST00000540699 CPSF7Q8N684 471 aaKnown RBP10.17□□□□□ -0.78
ATL3-204ENST00000540699 CDYL2Q8N8U2 506 aa10.17□□□□□ -0.78
ATL3-204ENST00000540699 BMPERQ8N8U9 685 aa10.17□□□□□ -0.78
ATL3-204ENST00000540699 AGBL5Q8NDL9 886 aa10.17□□□□□ -0.78
ATL3-204ENST00000540699 CEP70Q8NHQ1 597 aa10.17□□□□□ -0.78
ATL3-204ENST00000540699 PYCR2Q96C36 320 aa10.17□□□□□ -0.78
ATL3-204ENST00000540699 SLC41A2Q96JW4 573 aa10.17□□□□□ -0.78
ATL3-204ENST00000540699 PPP1R36Q96LQ0 422 aa10.17□□□□□ -0.78
ATL3-204ENST00000540699 IL17FQ96PD4 163 aa10.17□□□□□ -0.78
ATL3-204ENST00000540699 OR2A14Q96R47 310 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms