RNA–Protein interactions for RNA: ENST00000540562.1

INO80E-203, Transcript of INO80 complex subunit E, humanhuman

TSL 2

Gene INO80E, Length 3,064 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
INO80E-203ENST00000540562 FAM220BPB1ANY3 271 aa13.63□□□□□ -0.23
INO80E-203ENST00000540562 RTCAO00442 366 aaKnown RBP13.63□□□□□ -0.23
INO80E-203ENST00000540562 RGS10O43665 173 aa13.63□□□□□ -0.23
INO80E-203ENST00000540562 LEFTY1O75610 366 aa13.63□□□□□ -0.23
INO80E-203ENST00000540562 CYP7B1O75881 506 aa13.63□□□□□ -0.23
INO80E-203ENST00000540562 LIPAP38571 399 aa13.63□□□□□ -0.23
INO80E-203ENST00000540562 GZMMP51124 257 aa13.63□□□□□ -0.23
INO80E-203ENST00000540562 SPIBQ01892 262 aa13.63□□□□□ -0.23
INO80E-203ENST00000540562 CAMK2GQ13555 558 aaPredicted RBP13.63□□□□□ -0.23
INO80E-203ENST00000540562 ZHX1-C8orf76Q96EF9 292 aa13.63□□□□□ -0.23
INO80E-203ENST00000540562 SCRN2Q96FV2 425 aa13.63□□□□□ -0.23
INO80E-203ENST00000540562 DACH2Q96NX9 599 aa13.63□□□□□ -0.23
INO80E-203ENST00000540562 CHCHD6Q9BRQ6 235 aa13.63□□□□□ -0.23
INO80E-203ENST00000540562 KLHL25Q9H0H3 589 aa13.63□□□□□ -0.23
INO80E-203ENST00000540562 SAMD4AQ9UPU9 718 aaKnown RBP13.63□□□□□ -0.23
INO80E-203ENST00000540562 TRIM17Q9Y577 477 aa13.63□□□□□ -0.23
INO80E-203ENST00000540562 GMEB1Q9Y692 573 aa13.63□□□□□ -0.23
INO80E-203ENST00000540562 ATXN8OSP0DMR3 200 aa13.63□□□□□ -0.23
INO80E-203ENST00000540562 CCR2P41597 374 aa13.63□□□□□ -0.23
INO80E-203ENST00000540562 NRIP1P48552 1158 aa13.63□□□□□ -0.23
INO80E-203ENST00000540562 DMC1Q14565 340 aa13.63□□□□□ -0.23
INO80E-203ENST00000540562 DUOXA1Q1HG43 343 aa13.63□□□□□ -0.23
INO80E-203ENST00000540562 ATG9BQ674R7 924 aa13.63□□□□□ -0.23
INO80E-203ENST00000540562 ASB11Q8WXH4 323 aa13.63□□□□□ -0.23
INO80E-203ENST00000540562 MAGED4Q96JG8 741 aa13.63□□□□□ -0.23
INO80E-203ENST00000540562 OR4K3Q96R72 315 aa13.63□□□□□ -0.23
INO80E-203ENST00000540562 NIPSNAP1Q9BPW8 284 aa13.63□□□□□ -0.23
INO80E-203ENST00000540562 SLC46A2Q9BY10 475 aa13.63□□□□□ -0.23
INO80E-203ENST00000540562 IL21Q9HBE4 155 aa13.63□□□□□ -0.23
INO80E-203ENST00000540562 IL1RAPQ9NPH3 570 aa13.63□□□□□ -0.23
INO80E-203ENST00000540562 ATP11BQ9Y2G3 1177 aa13.63□□□□□ -0.23
INO80E-203ENST00000540562 WNT6Q9Y6F9 365 aa13.63□□□□□ -0.23
INO80E-203ENST00000540562 FADS2P1A8MWK0 482 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 ZNF701M0R085 212 aaPredicted RBP13.62□□□□□ -0.23
INO80E-203ENST00000540562 LEFTY2O00292 366 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 KPNA3O00505 521 aaPredicted RBP13.62□□□□□ -0.23
INO80E-203ENST00000540562 KDM1AO60341 852 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 NME6O75414 186 aaPredicted RBP13.62□□□□□ -0.23
INO80E-203ENST00000540562 CCNDBP1O95273 360 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 SOX14O95416 240 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 C6orf47O95873 294 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 RETP07949 1114 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 STSP08842 583 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 CYP2A7P20853 494 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 ALDH9A1P49189 494 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 SPINT3P49223 89 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 DBPQ10586 325 aaPredicted RBP13.62□□□□□ -0.23
INO80E-203ENST00000540562 ACOX1Q15067 660 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 CPTPQ5TA50 214 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 AGTRAPQ6RW13 159 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 DDX53Q86TM3 631 aaKnown RBP13.62□□□□□ -0.23
INO80E-203ENST00000540562 SLC22A16Q86VW1 577 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 ALDH16A1Q8IZ83 802 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 SLC5A8Q8N695 610 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 HUS1BQ8NHY5 278 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 ALPK1Q96QP1 1244 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 NEURL2Q9BR09 285 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 COPS4Q9BT78 406 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 RAB23Q9ULC3 237 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 SPTBN5Q9NRC6 3674 aaKnown RBP13.62□□□□□ -0.23
INO80E-203ENST00000540562 SDK1Q7Z5N4 2213 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 UGT2B11O75310 529 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 LRG1P02750 347 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 RPS3P23396 243 aaKnown RBP eCLIP13.62□□□□□ -0.23
INO80E-203ENST00000540562 RECQLP46063 649 aaPredicted RBP13.62□□□□□ -0.23
INO80E-203ENST00000540562 ST13P50502 369 aaKnown RBP13.62□□□□□ -0.23
INO80E-203ENST00000540562 CRYBA2P53672 197 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 WNT3P56703 355 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 NPRL3Q12980 569 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 LEXMQ3ZCV2 418 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 ZNF385BQ569K4 471 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 SHQ1Q6PI26 577 aaKnown RBP13.62□□□□□ -0.23
INO80E-203ENST00000540562 BCDIN3DQ7Z5W3 292 aaKnown RBP13.62□□□□□ -0.23
INO80E-203ENST00000540562 TRAPPC5Q8IUR0 188 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 PJA1Q8NG27 643 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 NFKBIDQ8NI38 313 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 NEIL2Q969S2 332 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 TMEM159Q96B96 161 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 Q96MT0 163 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 IL4I1Q96RQ9 567 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 FAM83DQ9H4H8 585 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 EFCAB9A8MZ26 197 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 K7ESM1 405 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 SUV39H1O43463 412 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 TGM5O43548 720 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 CBFA2T3O75081 653 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 ABLIM3O94929 683 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 APOL3O95236 402 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 IGFBP1P08833 259 aaPredicted RBP13.62□□□□□ -0.23
INO80E-203ENST00000540562 HLA-EP13747 358 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 GRSF1Q12849 480 aaKnown RBP eCLIP13.62□□□□□ -0.23
INO80E-203ENST00000540562 RPS26P11Q5JNZ5 115 aaPredicted RBP13.62□□□□□ -0.23
INO80E-203ENST00000540562 CALHM3Q86XJ0 350 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 CFAP206Q8IYR0 622 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 Q8N9G6 341 aaPredicted RBP13.62□□□□□ -0.23
INO80E-203ENST00000540562 LGALS12Q96DT0 336 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 TUBA1CQ9BQE3 449 aa13.62□□□□□ -0.23
INO80E-203ENST00000540562 EXOSC4Q9NPD3 245 aaKnown RBP13.62□□□□□ -0.23
INO80E-203ENST00000540562 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.61□□□□□ -0.23
INO80E-203ENST00000540562 WNT9AO14904 365 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms