RNA–Protein interactions for RNA: ENST00000539552.1

AC055720.1-201, humanhuman

TSL 5 BASIC

Gene AC055720.1, Length 475 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055720.1-201ENST00000539552 ISG20Q96AZ6 181 aaKnown RBP3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 LENG9Q96B70 501 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 TMIGD2Q96BF3 282 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 EFHD2Q96C19 240 aaPredicted RBP3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 SLC41A3Q96GZ6 507 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 MSANTD3Q96H12 275 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 VCPIP1Q96JH7 1222 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 SPAG8Q99932 426 aaPredicted RBP3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 TMEM79Q9BSE2 394 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 FICDQ9BVA6 458 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 SCNM1Q9BWG6 230 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 C1QTNF5Q9BXJ0 243 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 PINK1Q9BXM7 581 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 CADM1Q9BY67 442 aaKnown RBP3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 AMBRA1Q9C0C7 1298 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 R3HDMLQ9H3Y0 253 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 AGO3Q9H9G7 860 aaKnown RBP3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 MAGEF1Q9HAY2 307 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 EQTNQ9NQ60 294 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 KLHL1Q9NR64 748 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 AGPAT3Q9NRZ7 376 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 ETNK2Q9NVF9 386 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 LARSQ9P2J5 1176 aaKnown RBP3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 GPR132Q9UNW8 380 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 MGAT4BQ9UQ53 548 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 DTX4Q9Y2E6 619 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 FAM96BQ9Y3D0 163 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 PKP3Q9Y446 797 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 COX11Q9Y6N1 276 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 GAKO14976 1311 aa3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 COL3A1P02461 1466 aaPredicted RBP3.67□□□□□ -1.82
AC055720.1-201ENST00000539552 SPG11Q96JI7 2443 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 ARFGEF2Q9Y6D5 1785 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 MAGEA13PA6NCF6 341 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 OR6C68A6NDL8 312 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 CBY3A6NI87 242 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 KLRF2D3W0D1 207 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 RNASET2O00584 256 aaKnown RBP3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 CLDN4O14493 209 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 ANKRD28O15084 1053 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 CTDSPLO15194 276 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 OGTO15294 1046 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 FCGR3BO75015 233 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 ATP9AO75110 1047 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 CSDE1O75534 798 aaKnown RBP3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 RAD51DO75771 328 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 TJP3O95049 919 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 SPDEFO95238 335 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 VNN1O95497 513 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 CBX6O95503 412 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 MT-CYBP00156 380 aaPredicted RBP3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 C1RP00736 705 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 CHRNA1P02708 482 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 ASNSP08243 561 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 HPGDP15428 266 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 CYP11B2P19099 503 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 UGT1A6P19224 532 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 EDN2P20800 178 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 ITGA3P26006 1051 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 DUSP1P28562 367 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 APOBEC3AP31941 199 aaPredicted RBP3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 GMPSP49915 693 aaPredicted RBP3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 CNN1P51911 297 aaKnown RBP3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 MFAP3P55082 362 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 CXADRP78310 365 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 OCA2Q04671 838 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 LIPEQ05469 1076 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 ARHGAP1Q07960 439 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 BNIP1Q12981 228 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 TNK1Q13470 666 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 DNASE1L3Q13609 305 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 TOB2Q14106 344 aaPredicted RBP3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 SOWAHAQ2M3V2 549 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 BCL7AQ4VC05 210 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 RABL3Q5HYI8 236 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 C6orf141Q5SZD1 244 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 TREML2Q5T2D2 321 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 LRRC38Q5VT99 294 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 B3GLCTQ6Y288 498 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 Q6ZRM9 215 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 RNF144BQ7Z419 303 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 GDF7Q7Z4P5 450 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 GPR180Q86V85 440 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 ERO1BQ86YB8 467 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 NRROSQ86YC3 692 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 TDRPQ86YL5 185 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 AQP12AQ8IXF9 295 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 SRRM1Q8IYB3 904 aaKnown RBP3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 TMEM132CQ8N3T6 1108 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 SCAIQ8N9R8 606 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 C8orf58Q8NAV2 365 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 STKLD1Q8NE28 680 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 PRSS33Q8NF86 280 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 BBS10Q8TAM1 723 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 RAB3IL1Q8TBN0 382 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 SMG7Q92540 1137 aaKnown RBP3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 KAT2BQ92831 832 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 SLC25A28Q96A46 364 aa3.66□□□□□ -1.82
AC055720.1-201ENST00000539552 FKBP10Q96AY3 582 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms