RNA–Protein interactions for RNA: ENST00000539522.2

CCDC42-202, Transcript of coiled-coil domain containing 42, humanhuman

TSL 1 (best) BASIC

Gene CCDC42, Length 1,087 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42-202ENST00000539522 MACROD1Q9BQ69 325 aa12.43□□□□□ -0.42
CCDC42-202ENST00000539522 HAUS8Q9BT25 410 aa12.43□□□□□ -0.42
CCDC42-202ENST00000539522 PCBD2Q9H0N5 130 aa12.43□□□□□ -0.42
CCDC42-202ENST00000539522 AKIRIN1Q9H9L7 192 aaPredicted RBP12.43□□□□□ -0.42
CCDC42-202ENST00000539522 STARD5Q9NSY2 213 aa12.43□□□□□ -0.42
CCDC42-202ENST00000539522 OXSMQ9NWU1 459 aa12.43□□□□□ -0.42
CCDC42-202ENST00000539522 SOHLH2Q9NX45 425 aa12.43□□□□□ -0.42
CCDC42-202ENST00000539522 SLC39A1Q9NY26 324 aa12.43□□□□□ -0.42
CCDC42-202ENST00000539522 ANKMY1Q9P2S6 941 aa12.43□□□□□ -0.42
CCDC42-202ENST00000539522 TMCO1Q9UM00 188 aa12.43□□□□□ -0.42
CCDC42-202ENST00000539522 PCDHGA3Q9Y5H0 932 aa12.43□□□□□ -0.42
CCDC42-202ENST00000539522 TMEM150CB9EJG8 249 aa12.42□□□□□ -0.42
CCDC42-202ENST00000539522 C4orf51C9J302 202 aa12.42□□□□□ -0.42
CCDC42-202ENST00000539522 H0YGG7 62 aa12.42□□□□□ -0.42
CCDC42-202ENST00000539522 TLX3O43711 291 aaPredicted RBP12.42□□□□□ -0.42
CCDC42-202ENST00000539522 FAM107AO95990 144 aa12.42□□□□□ -0.42
CCDC42-202ENST00000539522 S100BP04271 92 aaPredicted RBP12.42□□□□□ -0.42
CCDC42-202ENST00000539522 C1GALT1C1LP0DN25 315 aa12.42□□□□□ -0.42
CCDC42-202ENST00000539522 IMPDH1P20839 514 aa12.42□□□□□ -0.42
CCDC42-202ENST00000539522 BGNP21810 368 aa12.42□□□□□ -0.42
CCDC42-202ENST00000539522 CASP2P42575 452 aa12.42□□□□□ -0.42
CCDC42-202ENST00000539522 DNAJB13P59910 316 aa12.42□□□□□ -0.42
CCDC42-202ENST00000539522 ARF3P61204 181 aaPredicted RBP12.42□□□□□ -0.42
CCDC42-202ENST00000539522 HERVK_113P63132 956 aa12.42□□□□□ -0.42
CCDC42-202ENST00000539522 RELAQ04206 551 aa12.42□□□□□ -0.42
CCDC42-202ENST00000539522 FOXM1Q08050 763 aa12.42□□□□□ -0.42
CCDC42-202ENST00000539522 CYP4F3Q08477 520 aa12.42□□□□□ -0.42
CCDC42-202ENST00000539522 GTF2H2Q13888 395 aa12.42□□□□□ -0.42
CCDC42-202ENST00000539522 CHI3L2Q15782 390 aa12.42□□□□□ -0.42
CCDC42-202ENST00000539522 HKDC1Q2TB90 917 aa12.42□□□□□ -0.42
CCDC42-202ENST00000539522 PRTGQ2VWP7 1150 aa12.42□□□□□ -0.42
CCDC42-202ENST00000539522 ATG9BQ674R7 924 aa12.42□□□□□ -0.42
CCDC42-202ENST00000539522 GTF2H2CQ6P1K8 395 aa12.42□□□□□ -0.42
CCDC42-202ENST00000539522 SLC22A9Q8IVM8 553 aa12.42□□□□□ -0.42
CCDC42-202ENST00000539522 TMEM151BQ8IW70 566 aa12.42□□□□□ -0.42
CCDC42-202ENST00000539522 CDK15Q96Q40 435 aa12.42□□□□□ -0.42
CCDC42-202ENST00000539522 TAAR9Q96RI9 348 aa12.42□□□□□ -0.42
CCDC42-202ENST00000539522 DDA1Q9BW61 102 aa12.42□□□□□ -0.42
CCDC42-202ENST00000539522 ERVK-6Q9BXR3 956 aa12.42□□□□□ -0.42
CCDC42-202ENST00000539522 NSRP1Q9H0G5 558 aaKnown RBP12.42□□□□□ -0.42
CCDC42-202ENST00000539522 PELI2Q9HAT8 420 aa12.42□□□□□ -0.42
CCDC42-202ENST00000539522 GPRC5BQ9NZH0 403 aa12.42□□□□□ -0.42
CCDC42-202ENST00000539522 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.42□□□□□ -0.42
CCDC42-202ENST00000539522 OPTCQ9UBM4 332 aa12.42□□□□□ -0.42
CCDC42-202ENST00000539522 SNX7Q9UNH6 387 aa12.42□□□□□ -0.42
CCDC42-202ENST00000539522 MRPS2Q9Y399 296 aaKnown RBP12.42□□□□□ -0.42
CCDC42-202ENST00000539522 PCDHGA4Q9Y5G9 962 aa12.42□□□□□ -0.42
CCDC42-202ENST00000539522 FITM1A5D6W6 292 aa12.41□□□□□ -0.42
CCDC42-202ENST00000539522 C1QTNF9BB2RNN3 333 aa12.41□□□□□ -0.42
CCDC42-202ENST00000539522 SMIM24O75264 130 aa12.41□□□□□ -0.42
CCDC42-202ENST00000539522 CCNDBP1O95273 360 aa12.41□□□□□ -0.42
CCDC42-202ENST00000539522 DLGAP3O95886 979 aa12.41□□□□□ -0.42
CCDC42-202ENST00000539522 SERPINE1P05121 402 aa12.41□□□□□ -0.42
CCDC42-202ENST00000539522 C1QTNF9P0C862 333 aa12.41□□□□□ -0.42
CCDC42-202ENST00000539522 JMJD7P0C870 316 aa12.41□□□□□ -0.42
CCDC42-202ENST00000539522 EZRP15311 586 aaKnown RBP12.41□□□□□ -0.42
CCDC42-202ENST00000539522 GNAZP19086 355 aa12.41□□□□□ -0.42
CCDC42-202ENST00000539522 DRD4P21917 467 aa12.41□□□□□ -0.42
CCDC42-202ENST00000539522 SLC5A2P31639 672 aa12.41□□□□□ -0.42
CCDC42-202ENST00000539522 SCTRP47872 440 aa12.41□□□□□ -0.42
CCDC42-202ENST00000539522 CCR8P51685 355 aa12.41□□□□□ -0.42
CCDC42-202ENST00000539522 IL11RAQ14626 422 aa12.41□□□□□ -0.42
CCDC42-202ENST00000539522 LIPMQ5VYY2 423 aa12.41□□□□□ -0.42
CCDC42-202ENST00000539522 ZNF385CQ66K41 422 aaPredicted RBP12.41□□□□□ -0.42
CCDC42-202ENST00000539522 LCN10Q6JVE6 187 aa12.41□□□□□ -0.42
CCDC42-202ENST00000539522 METTL2BQ6P1Q9 378 aaKnown RBP12.41□□□□□ -0.42
CCDC42-202ENST00000539522 LSMEM2Q8N112 164 aa12.41□□□□□ -0.42
CCDC42-202ENST00000539522 RNF175Q8N4F7 328 aa12.41□□□□□ -0.42
CCDC42-202ENST00000539522 SNX31Q8N9S9 440 aa12.41□□□□□ -0.42
CCDC42-202ENST00000539522 BCAS4Q8TDM0 211 aa12.41□□□□□ -0.42
CCDC42-202ENST00000539522 CREB3L4Q8TEY5 395 aa12.41□□□□□ -0.42
CCDC42-202ENST00000539522 C10orf90Q96M02 699 aa12.41□□□□□ -0.42
CCDC42-202ENST00000539522 ZFYVE21Q9BQ24 234 aa12.41□□□□□ -0.42
CCDC42-202ENST00000539522 GATA5Q9BWX5 397 aaPredicted RBP12.41□□□□□ -0.42
CCDC42-202ENST00000539522 NOL11Q9H8H0 719 aaKnown RBP12.41□□□□□ -0.42
CCDC42-202ENST00000539522 IPPKQ9H8X2 491 aa12.41□□□□□ -0.42
CCDC42-202ENST00000539522 THAP1Q9NVV9 213 aa12.41□□□□□ -0.42
CCDC42-202ENST00000539522 ANGPTL2Q9UKU9 493 aa12.41□□□□□ -0.42
CCDC42-202ENST00000539522 PLCL2Q9UPR0 1127 aa12.41□□□□□ -0.42
CCDC42-202ENST00000539522 RNF11Q9Y3C5 154 aa12.41□□□□□ -0.42
CCDC42-202ENST00000539522 DYRK1BQ9Y463 629 aa12.41□□□□□ -0.42
CCDC42-202ENST00000539522 KCNE2Q9Y6J6 123 aa12.41□□□□□ -0.42
CCDC42-202ENST00000539522 CHD8Q9HCK8 2581 aa12.41□□□□□ -0.42
CCDC42-202ENST00000539522 PCSK5Q92824 1860 aa12.4□□□□□ -0.42
CCDC42-202ENST00000539522 TRBC2A0A5B9 178 aa12.4□□□□□ -0.42
CCDC42-202ENST00000539522 TMEM114B3SHH9 223 aa12.4□□□□□ -0.42
CCDC42-202ENST00000539522 TAF4O00268 1085 aa12.4□□□□□ -0.42
CCDC42-202ENST00000539522 POLR1CO15160 346 aaPredicted RBP12.4□□□□□ -0.42
CCDC42-202ENST00000539522 NVLO15381 856 aaKnown RBP12.4□□□□□ -0.42
CCDC42-202ENST00000539522 EDF1O60869 148 aaKnown RBP12.4□□□□□ -0.42
CCDC42-202ENST00000539522 SNUPNO95149 360 aaKnown RBP12.4□□□□□ -0.42
CCDC42-202ENST00000539522 RORAP35398 523 aa12.4□□□□□ -0.42
CCDC42-202ENST00000539522 VSX2P58304 361 aaPredicted RBP12.4□□□□□ -0.42
CCDC42-202ENST00000539522 ERVPABLB-1P60509 514 aa12.4□□□□□ -0.42
CCDC42-202ENST00000539522 ACY1Q03154 408 aa12.4□□□□□ -0.42
CCDC42-202ENST00000539522 BST1Q10588 318 aa12.4□□□□□ -0.42
CCDC42-202ENST00000539522 CHIT1Q13231 466 aa12.4□□□□□ -0.42
CCDC42-202ENST00000539522 SLBPQ14493 270 aaKnown RBP eCLIP12.4□□□□□ -0.42
CCDC42-202ENST00000539522 TBCCQ15814 346 aa12.4□□□□□ -0.42
CCDC42-202ENST00000539522 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms