RNA–Protein interactions for RNA: ENST00000539372.5

TNFRSF1A-212, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,063 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-212ENST00000539372 PABPN1LA6NDY0 278 aaKnown RBP18.08■□□□□ 0.48
TNFRSF1A-212ENST00000539372 AGFG2O95081 481 aa18.08■□□□□ 0.48
TNFRSF1A-212ENST00000539372 GUCA1CO95843 209 aa18.08■□□□□ 0.48
TNFRSF1A-212ENST00000539372 NPPBP16860 134 aa18.08■□□□□ 0.48
TNFRSF1A-212ENST00000539372 CCND1P24385 295 aa18.08■□□□□ 0.48
TNFRSF1A-212ENST00000539372 CXCR2P25025 360 aa18.08■□□□□ 0.48
TNFRSF1A-212ENST00000539372 AVPR1BP47901 424 aa18.08■□□□□ 0.48
TNFRSF1A-212ENST00000539372 NR6A1Q15406 480 aa18.08■□□□□ 0.48
TNFRSF1A-212ENST00000539372 CAPN13Q6MZZ7 669 aaPredicted RBP18.08■□□□□ 0.48
TNFRSF1A-212ENST00000539372 LCTLQ6UWM7 567 aa18.08■□□□□ 0.48
TNFRSF1A-212ENST00000539372 LINC00696Q6ZRV3 163 aa18.08■□□□□ 0.48
TNFRSF1A-212ENST00000539372 NDUFAF7Q7L592 441 aa18.08■□□□□ 0.48
TNFRSF1A-212ENST00000539372 FBXO36Q8NEA4 188 aa18.08■□□□□ 0.48
TNFRSF1A-212ENST00000539372 ZCCHC10Q8TBK6 192 aa18.08■□□□□ 0.48
TNFRSF1A-212ENST00000539372 TGIF2Q9GZN2 237 aa18.08■□□□□ 0.48
TNFRSF1A-212ENST00000539372 CORO1CQ9ULV4 474 aaPredicted RBP18.08■□□□□ 0.48
TNFRSF1A-212ENST00000539372 PCDHGA10Q9Y5H3 936 aa18.08■□□□□ 0.48
TNFRSF1A-212ENST00000539372 DOCK10Q96BY6 2186 aa18.07■□□□□ 0.48
TNFRSF1A-212ENST00000539372 LRRK2Q5S007 2527 aa18.07■□□□□ 0.48
TNFRSF1A-212ENST00000539372 LCMT2O60294 686 aaKnown RBP18.07■□□□□ 0.48
TNFRSF1A-212ENST00000539372 JRKO75564 520 aa18.07■□□□□ 0.48
TNFRSF1A-212ENST00000539372 IL1RNP18510 177 aa18.07■□□□□ 0.48
TNFRSF1A-212ENST00000539372 EFNA3P52797 238 aa18.07■□□□□ 0.48
TNFRSF1A-212ENST00000539372 MEF2AQ02078 507 aaPredicted RBP18.07■□□□□ 0.48
TNFRSF1A-212ENST00000539372 FRG1Q14331 258 aaKnown RBP18.07■□□□□ 0.48
TNFRSF1A-212ENST00000539372 EIF2S3LQ2VIR3 472 aaKnown RBP18.07■□□□□ 0.48
TNFRSF1A-212ENST00000539372 IGFL2Q6UWQ7 119 aa18.07■□□□□ 0.48
TNFRSF1A-212ENST00000539372 TMEM207Q6UWW9 146 aa18.07■□□□□ 0.48
TNFRSF1A-212ENST00000539372 STRA8Q7Z7C7 330 aa18.07■□□□□ 0.48
TNFRSF1A-212ENST00000539372 KBTBD2Q8IY47 623 aa18.07■□□□□ 0.48
TNFRSF1A-212ENST00000539372 AMER2Q8N7J2 671 aa18.07■□□□□ 0.48
TNFRSF1A-212ENST00000539372 DNAJB14Q8TBM8 379 aa18.07■□□□□ 0.48
TNFRSF1A-212ENST00000539372 PPP4R1Q8TF05 950 aa18.07■□□□□ 0.48
TNFRSF1A-212ENST00000539372 THAP11Q96EK4 314 aa18.07■□□□□ 0.48
TNFRSF1A-212ENST00000539372 TRIM54Q9BYV2 358 aa18.07■□□□□ 0.48
TNFRSF1A-212ENST00000539372 EPS8L2Q9H6S3 715 aa18.07■□□□□ 0.48
TNFRSF1A-212ENST00000539372 HCN3Q9P1Z3 774 aa18.07■□□□□ 0.48
TNFRSF1A-212ENST00000539372 ZFATQ9P243 1243 aa18.07■□□□□ 0.48
TNFRSF1A-212ENST00000539372 MKL2Q9ULH7 1088 aa18.07■□□□□ 0.48
TNFRSF1A-212ENST00000539372 NOVA2Q9UNW9 492 aaKnown RBP18.07■□□□□ 0.48
TNFRSF1A-212ENST00000539372 IGHV1-45A0A0A0MS14 117 aa18.06■□□□□ 0.48
TNFRSF1A-212ENST00000539372 SGK494L7N484 410 aa18.06■□□□□ 0.48
TNFRSF1A-212ENST00000539372 SEMA7AO75326 666 aa18.06■□□□□ 0.48
TNFRSF1A-212ENST00000539372 KLHL18O94889 574 aa18.06■□□□□ 0.48
TNFRSF1A-212ENST00000539372 BMP10O95393 424 aa18.06■□□□□ 0.48
TNFRSF1A-212ENST00000539372 CELA2AP08217 269 aa18.06■□□□□ 0.48
TNFRSF1A-212ENST00000539372 AP1S2P56377 157 aa18.06■□□□□ 0.48
TNFRSF1A-212ENST00000539372 MGAT5Q09328 741 aa18.06■□□□□ 0.48
TNFRSF1A-212ENST00000539372 ZNF460Q14592 562 aa18.06■□□□□ 0.48
TNFRSF1A-212ENST00000539372 CRB2Q5IJ48 1285 aa18.06■□□□□ 0.48
TNFRSF1A-212ENST00000539372 MFSD4BQ5TF39 518 aa18.06■□□□□ 0.48
TNFRSF1A-212ENST00000539372 DUPD1Q68J44 220 aa18.06■□□□□ 0.48
TNFRSF1A-212ENST00000539372 TMEM214Q6NUQ4 689 aaKnown RBP18.06■□□□□ 0.48
TNFRSF1A-212ENST00000539372 ISLR2Q6UXK2 745 aa18.06■□□□□ 0.48
TNFRSF1A-212ENST00000539372 CAPN12Q6ZSI9 719 aa18.06■□□□□ 0.48
TNFRSF1A-212ENST00000539372 ASPGQ86U10 573 aa18.06■□□□□ 0.48
TNFRSF1A-212ENST00000539372 SLC26A11Q86WA9 606 aa18.06■□□□□ 0.48
TNFRSF1A-212ENST00000539372 ZBED8Q8IZ13 594 aa18.06■□□□□ 0.48
TNFRSF1A-212ENST00000539372 KCT2Q8NC54 265 aa18.06■□□□□ 0.48
TNFRSF1A-212ENST00000539372 CAMKVQ8NCB2 501 aa18.06■□□□□ 0.48
TNFRSF1A-212ENST00000539372 OR56A3Q8NH54 315 aa18.06■□□□□ 0.48
TNFRSF1A-212ENST00000539372 PRR7Q8TB68 274 aa18.06■□□□□ 0.48
TNFRSF1A-212ENST00000539372 SLC13A3Q8WWT9 602 aa18.06■□□□□ 0.48
TNFRSF1A-212ENST00000539372 FBXL8Q96CD0 374 aa18.06■□□□□ 0.48
TNFRSF1A-212ENST00000539372 OR4K3Q96R72 315 aa18.06■□□□□ 0.48
TNFRSF1A-212ENST00000539372 HAUS8Q9BT25 410 aa18.06■□□□□ 0.48
TNFRSF1A-212ENST00000539372 RNF14Q9UBS8 474 aa18.06■□□□□ 0.48
TNFRSF1A-212ENST00000539372 NTNG1Q9Y2I2 539 aa18.06■□□□□ 0.48
TNFRSF1A-212ENST00000539372 COPG1Q9Y678 874 aaKnown RBP18.06■□□□□ 0.48
TNFRSF1A-212ENST00000539372 RP1L1Q8IWN7 2480 aaPredicted RBP18.05■□□□□ 0.48
TNFRSF1A-212ENST00000539372 FAM95CA0A1B0GW59 222 aa18.05■□□□□ 0.48
TNFRSF1A-212ENST00000539372 E7ESA3 106 aa18.05■□□□□ 0.48
TNFRSF1A-212ENST00000539372 H0YIG0 161 aa18.05■□□□□ 0.48
TNFRSF1A-212ENST00000539372 PIAS1O75925 651 aa18.05■□□□□ 0.48
TNFRSF1A-212ENST00000539372 NSA2O95478 260 aaKnown RBP18.05■□□□□ 0.48
TNFRSF1A-212ENST00000539372 PRR35P0CG20 571 aa18.05■□□□□ 0.48
TNFRSF1A-212ENST00000539372 GRK3P35626 688 aa18.05■□□□□ 0.48
TNFRSF1A-212ENST00000539372 CCR8P51685 355 aa18.05■□□□□ 0.48
TNFRSF1A-212ENST00000539372 MFAP5Q13361 173 aa18.05■□□□□ 0.48
TNFRSF1A-212ENST00000539372 SBSNQ6UWP8 590 aa18.05■□□□□ 0.48
TNFRSF1A-212ENST00000539372 ZC3HC1Q86WB0 502 aaKnown RBP18.05■□□□□ 0.48
TNFRSF1A-212ENST00000539372 SIRT6Q8N6T7 355 aa18.05■□□□□ 0.48
TNFRSF1A-212ENST00000539372 MFSD9Q8NBP5 474 aa18.05■□□□□ 0.48
TNFRSF1A-212ENST00000539372 CATSPER1Q8NEC5 780 aa18.05■□□□□ 0.48
TNFRSF1A-212ENST00000539372 OR51Q1Q8NH59 317 aa18.05■□□□□ 0.48
TNFRSF1A-212ENST00000539372 BRIX1Q8TDN6 353 aaKnown RBP18.05■□□□□ 0.48
TNFRSF1A-212ENST00000539372 TM4SF19Q96DZ7 209 aa18.05■□□□□ 0.48
TNFRSF1A-212ENST00000539372 PSMG3-AS1Q96PY0 264 aa18.05■□□□□ 0.48
TNFRSF1A-212ENST00000539372 DPH5Q9H2P9 285 aa18.05■□□□□ 0.48
TNFRSF1A-212ENST00000539372 MOCS1Q9NZB8 636 aa18.05■□□□□ 0.48
TNFRSF1A-212ENST00000539372 PTGFRNQ9P2B2 879 aa18.05■□□□□ 0.48
TNFRSF1A-212ENST00000539372 NPEPPSL1A6NEC2 478 aa18.04■□□□□ 0.48
TNFRSF1A-212ENST00000539372 CDC7O00311 574 aa18.04■□□□□ 0.48
TNFRSF1A-212ENST00000539372 OR1F1O43749 312 aa18.04■□□□□ 0.48
TNFRSF1A-212ENST00000539372 ENO2P09104 434 aaPredicted RBP18.04■□□□□ 0.48
TNFRSF1A-212ENST00000539372 ZNF37AP17032 561 aaPredicted RBP18.04■□□□□ 0.48
TNFRSF1A-212ENST00000539372 ZNF169Q14929 603 aaPredicted RBP18.04■□□□□ 0.48
TNFRSF1A-212ENST00000539372 PCOLCEQ15113 449 aa18.04■□□□□ 0.48
TNFRSF1A-212ENST00000539372 MINDY4Q4G0A6 757 aa18.04■□□□□ 0.48
TNFRSF1A-212ENST00000539372 CATSPEREQ5SY80 951 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms