RNA–Protein interactions for RNA: ENST00000539320.2

SCARB1-206, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 720 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-206ENST00000539320 DOPEY1Q5JWR5 2465 aa21.06■□□□□ 0.96
SCARB1-206ENST00000539320 SVILO95425 2214 aa21.05■□□□□ 0.96
SCARB1-206ENST00000539320 IGHV1-45A0A0A0MS14 117 aa21.05■□□□□ 0.96
SCARB1-206ENST00000539320 H0YIG0 161 aa21.05■□□□□ 0.96
SCARB1-206ENST00000539320 NSA2O95478 260 aaKnown RBP21.05■□□□□ 0.96
SCARB1-206ENST00000539320 HIST1H2AGP0C0S8 130 aaPredicted RBP21.05■□□□□ 0.96
SCARB1-206ENST00000539320 HIST1H2ADP20671 130 aa21.05■□□□□ 0.96
SCARB1-206ENST00000539320 ARL4CP56559 192 aa21.05■□□□□ 0.96
SCARB1-206ENST00000539320 IL2P60568 153 aa21.05■□□□□ 0.96
SCARB1-206ENST00000539320 SNRPNP63162 240 aaKnown RBP21.05■□□□□ 0.96
SCARB1-206ENST00000539320 ZNF169Q14929 603 aaPredicted RBP21.05■□□□□ 0.96
SCARB1-206ENST00000539320 B3GNTL1Q67FW5 361 aaPredicted RBP21.05■□□□□ 0.96
SCARB1-206ENST00000539320 FAAH2Q6GMR7 532 aa21.05■□□□□ 0.96
SCARB1-206ENST00000539320 CAPN13Q6MZZ7 669 aaPredicted RBP21.05■□□□□ 0.96
SCARB1-206ENST00000539320 LINC00696Q6ZRV3 163 aa21.05■□□□□ 0.96
SCARB1-206ENST00000539320 CAMKVQ8NCB2 501 aa21.05■□□□□ 0.96
SCARB1-206ENST00000539320 OR9A4Q8NGU2 314 aa21.05■□□□□ 0.96
SCARB1-206ENST00000539320 DNAJB14Q8TBM8 379 aa21.05■□□□□ 0.96
SCARB1-206ENST00000539320 HIST1H2AHQ96KK5 128 aa21.05■□□□□ 0.96
SCARB1-206ENST00000539320 HIST1H2AJQ99878 128 aa21.05■□□□□ 0.96
SCARB1-206ENST00000539320 H2AFJQ9BTM1 129 aa21.05■□□□□ 0.96
SCARB1-206ENST00000539320 TEX264Q9Y6I9 313 aa21.05■□□□□ 0.96
SCARB1-206ENST00000539320 LOC102723996A0A087X1L8 192 aa21.04■□□□□ 0.96
SCARB1-206ENST00000539320 TTI1O43156 1089 aa21.04■□□□□ 0.96
SCARB1-206ENST00000539320 SEC31AO94979 1220 aaKnown RBP21.04■□□□□ 0.96
SCARB1-206ENST00000539320 CBX6O95503 412 aa21.04■□□□□ 0.96
SCARB1-206ENST00000539320 SERPINA7P05543 415 aa21.04■□□□□ 0.96
SCARB1-206ENST00000539320 PRR35P0CG20 571 aa21.04■□□□□ 0.96
SCARB1-206ENST00000539320 CDH1P12830 882 aa21.04■□□□□ 0.96
SCARB1-206ENST00000539320 GRK3P35626 688 aa21.04■□□□□ 0.96
SCARB1-206ENST00000539320 BCL6P41182 706 aa21.04■□□□□ 0.96
SCARB1-206ENST00000539320 ITGA8P53708 1063 aa21.04■□□□□ 0.96
SCARB1-206ENST00000539320 AP1S2P56377 157 aa21.04■□□□□ 0.96
SCARB1-206ENST00000539320 TLR1Q15399 786 aa21.04■□□□□ 0.96
SCARB1-206ENST00000539320 ASPGQ86U10 573 aa21.04■□□□□ 0.96
SCARB1-206ENST00000539320 PRR7Q8TB68 274 aa21.04■□□□□ 0.96
SCARB1-206ENST00000539320 ZCCHC10Q8TBK6 192 aa21.04■□□□□ 0.96
SCARB1-206ENST00000539320 BRIX1Q8TDN6 353 aaKnown RBP21.04■□□□□ 0.96
SCARB1-206ENST00000539320 SNF8Q96H20 258 aa21.04■□□□□ 0.96
SCARB1-206ENST00000539320 LMF1Q96S06 567 aa21.04■□□□□ 0.96
SCARB1-206ENST00000539320 BARD1Q99728 777 aaKnown RBP21.04■□□□□ 0.96
SCARB1-206ENST00000539320 OLFM1Q99784 485 aa21.04■□□□□ 0.96
SCARB1-206ENST00000539320 HAUS8Q9BT25 410 aa21.04■□□□□ 0.96
SCARB1-206ENST00000539320 AGPAT4Q9NRZ5 378 aa21.04■□□□□ 0.96
SCARB1-206ENST00000539320 ARL15Q9NXU5 204 aa21.04■□□□□ 0.96
SCARB1-206ENST00000539320 MKL2Q9ULH7 1088 aa21.04■□□□□ 0.96
SCARB1-206ENST00000539320 SAR1BQ9Y6B6 198 aa21.04■□□□□ 0.96
SCARB1-206ENST00000539320 FEZF1A0PJY2 475 aa21.03■□□□□ 0.96
SCARB1-206ENST00000539320 ANKUB1A6NFN9 424 aa21.03■□□□□ 0.96
SCARB1-206ENST00000539320 CCDC188H7C350 402 aa21.03■□□□□ 0.96
SCARB1-206ENST00000539320 KLHL18O94889 574 aa21.03■□□□□ 0.96
SCARB1-206ENST00000539320 BMP10O95393 424 aa21.03■□□□□ 0.96
SCARB1-206ENST00000539320 RNF224P0DH78 156 aa21.03■□□□□ 0.96
SCARB1-206ENST00000539320 IL1RNP18510 177 aa21.03■□□□□ 0.96
SCARB1-206ENST00000539320 SOX11P35716 441 aa21.03■□□□□ 0.96
SCARB1-206ENST00000539320 PGGT1BP53609 377 aa21.03■□□□□ 0.96
SCARB1-206ENST00000539320 FRG1Q14331 258 aaKnown RBP21.03■□□□□ 0.96
SCARB1-206ENST00000539320 PCOLCEQ15113 449 aa21.03■□□□□ 0.96
SCARB1-206ENST00000539320 TMEM214Q6NUQ4 689 aaKnown RBP21.03■□□□□ 0.96
SCARB1-206ENST00000539320 TMEM205Q6UW68 189 aa21.03■□□□□ 0.96
SCARB1-206ENST00000539320 PRSS41Q7RTY9 318 aa21.03■□□□□ 0.96
SCARB1-206ENST00000539320 MACROD1Q9BQ69 325 aa21.03■□□□□ 0.96
SCARB1-206ENST00000539320 TRIM54Q9BYV2 358 aa21.03■□□□□ 0.96
SCARB1-206ENST00000539320 FAM129AQ9BZQ8 928 aa21.03■□□□□ 0.96
SCARB1-206ENST00000539320 VWA7Q9Y334 891 aa21.03■□□□□ 0.96
SCARB1-206ENST00000539320 UQCRHP07919 91 aa21.02■□□□□ 0.96
SCARB1-206ENST00000539320 CYC1P08574 325 aa21.02■□□□□ 0.96
SCARB1-206ENST00000539320 ENO2P09104 434 aaPredicted RBP21.02■□□□□ 0.96
SCARB1-206ENST00000539320 C8orf89P0DMQ9 161 aa21.02■□□□□ 0.96
SCARB1-206ENST00000539320 EFNA3P52797 238 aa21.02■□□□□ 0.96
SCARB1-206ENST00000539320 CDC16Q13042 620 aa21.02■□□□□ 0.96
SCARB1-206ENST00000539320 ELOAQ14241 798 aaKnown RBP21.02■□□□□ 0.96
SCARB1-206ENST00000539320 DUPD1Q68J44 220 aa21.02■□□□□ 0.96
SCARB1-206ENST00000539320 RIPOR1Q6ZS17 1223 aa21.02■□□□□ 0.96
SCARB1-206ENST00000539320 ANKMY2Q8IV38 441 aa21.02■□□□□ 0.96
SCARB1-206ENST00000539320 OR56A3Q8NH54 315 aa21.02■□□□□ 0.96
SCARB1-206ENST00000539320 ATL1Q8WXF7 558 aa21.02■□□□□ 0.96
SCARB1-206ENST00000539320 PSMF1Q92530 271 aa21.02■□□□□ 0.96
SCARB1-206ENST00000539320 ANP32BQ92688 251 aaKnown RBP21.02■□□□□ 0.96
SCARB1-206ENST00000539320 FBXL8Q96CD0 374 aa21.02■□□□□ 0.96
SCARB1-206ENST00000539320 TRIM31Q9BZY9 425 aa21.02■□□□□ 0.96
SCARB1-206ENST00000539320 VN1R1Q9GZP7 353 aa21.02■□□□□ 0.96
SCARB1-206ENST00000539320 ZNF700Q9H0M5 742 aa21.02■□□□□ 0.96
SCARB1-206ENST00000539320 ANKHQ9HCJ1 492 aa21.02■□□□□ 0.96
SCARB1-206ENST00000539320 HCN3Q9P1Z3 774 aa21.02■□□□□ 0.96
SCARB1-206ENST00000539320 ZFATQ9P243 1243 aa21.02■□□□□ 0.96
SCARB1-206ENST00000539320 PTGFRNQ9P2B2 879 aa21.02■□□□□ 0.96
SCARB1-206ENST00000539320 JRKO75564 520 aa21.01■□□□□ 0.95
SCARB1-206ENST00000539320 DDAH2O95865 285 aa21.01■□□□□ 0.95
SCARB1-206ENST00000539320 SLC35G6P0C7Q6 338 aa21.01■□□□□ 0.95
SCARB1-206ENST00000539320 NPPBP16860 134 aa21.01■□□□□ 0.95
SCARB1-206ENST00000539320 PAFAH1B1P43034 410 aa21.01■□□□□ 0.95
SCARB1-206ENST00000539320 CCR8P51685 355 aa21.01■□□□□ 0.95
SCARB1-206ENST00000539320 AP2B1P63010 937 aa21.01■□□□□ 0.95
SCARB1-206ENST00000539320 ARG2P78540 354 aa21.01■□□□□ 0.95
SCARB1-206ENST00000539320 MGAT5Q09328 741 aa21.01■□□□□ 0.95
SCARB1-206ENST00000539320 MINDY4Q4G0A6 757 aa21.01■□□□□ 0.95
SCARB1-206ENST00000539320 SLC26A11Q86WA9 606 aa21.01■□□□□ 0.95
SCARB1-206ENST00000539320 SIRT6Q8N6T7 355 aa21.01■□□□□ 0.95
SCARB1-206ENST00000539320 MFSD9Q8NBP5 474 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms