RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 A0A0A6YYC8 382 aaPredicted RBP10.97□□□□□ -0.65
RTN3-209ENST00000538995 TRBC2A0A5B9 178 aa10.97□□□□□ -0.65
RTN3-209ENST00000538995 NPEPPSL1A6NEC2 478 aa10.97□□□□□ -0.65
RTN3-209ENST00000538995 FAM159BA6NKW6 160 aa10.97□□□□□ -0.65
RTN3-209ENST00000538995 TTLL8A6PVC2 850 aa10.97□□□□□ -0.65
RTN3-209ENST00000538995 IDSB3KWA1 339 aa10.97□□□□□ -0.65
RTN3-209ENST00000538995 I3L1I5 382 aaPredicted RBP10.97□□□□□ -0.65
RTN3-209ENST00000538995 WISP3O95389 354 aaPredicted RBP10.97□□□□□ -0.65
RTN3-209ENST00000538995 GUCA1CO95843 209 aa10.97□□□□□ -0.65
RTN3-209ENST00000538995 SAT1P21673 171 aa10.97□□□□□ -0.65
RTN3-209ENST00000538995 SSTR1P30872 391 aa10.97□□□□□ -0.65
RTN3-209ENST00000538995 GP5P40197 560 aa10.97□□□□□ -0.65
RTN3-209ENST00000538995 PGGT1BP53609 377 aa10.97□□□□□ -0.65
RTN3-209ENST00000538995 SLC12A2P55011 1212 aa10.97□□□□□ -0.65
RTN3-209ENST00000538995 NAB1Q13506 487 aa10.97□□□□□ -0.65
RTN3-209ENST00000538995 RAPSNQ13702 412 aa10.97□□□□□ -0.65
RTN3-209ENST00000538995 ZXDCQ2QGD7 858 aaPredicted RBP10.97□□□□□ -0.65
RTN3-209ENST00000538995 VWA2Q5GFL6 755 aa10.97□□□□□ -0.65
RTN3-209ENST00000538995 ATG9BQ674R7 924 aa10.97□□□□□ -0.65
RTN3-209ENST00000538995 NIPAL1Q6NVV3 410 aa10.97□□□□□ -0.65
RTN3-209ENST00000538995 CAPN12Q6ZSI9 719 aa10.97□□□□□ -0.65
RTN3-209ENST00000538995 ASPGQ86U10 573 aa10.97□□□□□ -0.65
RTN3-209ENST00000538995 ZC3H7AQ8IWR0 971 aaKnown RBP10.97□□□□□ -0.65
RTN3-209ENST00000538995 EFCAB3Q8N7B9 438 aa10.97□□□□□ -0.65
RTN3-209ENST00000538995 MFSD9Q8NBP5 474 aa10.97□□□□□ -0.65
RTN3-209ENST00000538995 CPT1CQ8TCG5 803 aa10.97□□□□□ -0.65
RTN3-209ENST00000538995 FBXO25Q8TCJ0 367 aa10.97□□□□□ -0.65
RTN3-209ENST00000538995 ALKBH8Q96BT7 664 aaKnown RBP10.97□□□□□ -0.65
RTN3-209ENST00000538995 PYCR2Q96C36 320 aa10.97□□□□□ -0.65
RTN3-209ENST00000538995 OR4K3Q96R72 315 aa10.97□□□□□ -0.65
RTN3-209ENST00000538995 GPR22Q99680 433 aa10.97□□□□□ -0.65
RTN3-209ENST00000538995 DERL2Q9GZP9 239 aa10.97□□□□□ -0.65
RTN3-209ENST00000538995 LHPPQ9H008 270 aa10.97□□□□□ -0.65
RTN3-209ENST00000538995 PELI2Q9HAT8 420 aa10.97□□□□□ -0.65
RTN3-209ENST00000538995 GPAMQ9HCL2 828 aa10.97□□□□□ -0.65
RTN3-209ENST00000538995 SMYD2Q9NRG4 433 aa10.97□□□□□ -0.65
RTN3-209ENST00000538995 IKZF3Q9UKT9 509 aa10.97□□□□□ -0.65
RTN3-209ENST00000538995 PLAAQ9Y263 795 aa10.97□□□□□ -0.65
RTN3-209ENST00000538995 B3GNT3Q9Y2A9 372 aa10.97□□□□□ -0.65
RTN3-209ENST00000538995 SLC22A7Q9Y694 548 aa10.97□□□□□ -0.65
RTN3-209ENST00000538995 HEATR5BQ9P2D3 2071 aa10.97□□□□□ -0.65
RTN3-209ENST00000538995 PTPN13Q12923 2485 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 ANKRD12Q6UB98 2062 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 LOC102723996A0A087X1L8 192 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 CDC7O00311 574 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 ZIC2O95409 532 aaPredicted RBP10.96□□□□□ -0.65
RTN3-209ENST00000538995 C1QAP02745 245 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 HEXBP07686 556 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 CXCR2P25025 360 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 STX2P32856 288 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 EMP2P54851 167 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 PLTPP55058 493 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 MLLT10P55197 1068 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 AP2B1P63010 937 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 SKP1P63208 163 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 PWP1Q13610 501 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 CSHL1Q14406 222 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 ZNF460Q14592 562 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 HERC3Q15034 1050 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 ZKSCAN8Q15776 578 aaPredicted RBP10.96□□□□□ -0.65
RTN3-209ENST00000538995 IGFBP7Q16270 282 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 WHAMMP3Q1A5X7 153 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 COLEC12Q5KU26 742 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 CDKL4Q5MAI5 379 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 AGAP7PQ5VUJ5 663 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 C8orf74Q6P047 294 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 IGFL2Q6UWQ7 119 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 ZDHHC24Q6UX98 284 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 C3orf62Q6ZUJ4 267 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 FRA10AC1Q70Z53 315 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 NDUFAF7Q7L592 441 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 CEP97Q8IW35 865 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 KLHDC8AQ8IYD2 350 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 PRSS58Q8IYP2 241 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 ZADH2Q8N4Q0 377 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 Q8NA96 180 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 GALNT11Q8NCW6 608 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 PPP4R1Q8TF05 950 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 ANKRD49Q8WVL7 239 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 SLC13A3Q8WWT9 602 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 SLC5A11Q8WWX8 675 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 NEIL2Q969S2 332 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 AGAP4Q96P64 663 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 RBBP8Q99708 897 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 ANKHQ9HCJ1 492 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 SLAMF7Q9NQ25 335 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 RIC8BQ9NVN3 520 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 CTNNAL1Q9UBT7 734 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 MRPS2Q9Y399 296 aaKnown RBP10.96□□□□□ -0.65
RTN3-209ENST00000538995 DYRK1BQ9Y463 629 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 KCNE2Q9Y6J6 123 aa10.96□□□□□ -0.65
RTN3-209ENST00000538995 RELNP78509 3460 aa10.96□□□□□ -0.66
RTN3-209ENST00000538995 PRRC2CQ9Y520 2896 aaKnown RBP10.96□□□□□ -0.66
RTN3-209ENST00000538995 HECTD1Q9ULT8 2610 aa10.96□□□□□ -0.66
RTN3-209ENST00000538995 NSG1A0A0A6YYJ2 146 aa10.95□□□□□ -0.66
RTN3-209ENST00000538995 FEZF1A0PJY2 475 aa10.95□□□□□ -0.66
RTN3-209ENST00000538995 CXorf49A8MYA2 514 aaPredicted RBP10.95□□□□□ -0.66
RTN3-209ENST00000538995 NDUFS4O43181 175 aa10.95□□□□□ -0.66
RTN3-209ENST00000538995 LCMT2O60294 686 aaKnown RBP10.95□□□□□ -0.66
RTN3-209ENST00000538995 BMP10O95393 424 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms