RNA–Protein interactions for RNA: ENST00000538708.5

PTPRB-204, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 1 (best) BASIC

Gene PTPRB, Length 5,839 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-204ENST00000538708 C1GALT1C1Q96EU7 318 aa9.19□□□□□ -0.94
PTPRB-204ENST00000538708 ZNF347Q96SE7 839 aa9.19□□□□□ -0.94
PTPRB-204ENST00000538708 ORAI3Q9BRQ5 295 aa9.19□□□□□ -0.94
PTPRB-204ENST00000538708 DUSP23Q9BVJ7 150 aa9.19□□□□□ -0.94
PTPRB-204ENST00000538708 BRD7Q9NPI1 651 aa9.19□□□□□ -0.94
PTPRB-204ENST00000538708 A0A1W2PRG6 482 aa9.19□□□□□ -0.94
PTPRB-204ENST00000538708 E7EQ34 232 aa9.19□□□□□ -0.94
PTPRB-204ENST00000538708 M0R2N6 131 aa9.19□□□□□ -0.94
PTPRB-204ENST00000538708 BCKDKO14874 412 aa9.19□□□□□ -0.94
PTPRB-204ENST00000538708 OAZ2O95190 189 aa9.19□□□□□ -0.94
PTPRB-204ENST00000538708 MSX2P35548 267 aaPredicted RBP9.19□□□□□ -0.94
PTPRB-204ENST00000538708 NCEH1Q6PIU2 408 aa9.19□□□□□ -0.94
PTPRB-204ENST00000538708 CRELD2Q6UXH1 353 aaPredicted RBP9.19□□□□□ -0.94
PTPRB-204ENST00000538708 ZNF611Q8N823 705 aa9.19□□□□□ -0.94
PTPRB-204ENST00000538708 OR7A2PQ8NGA2 310 aa9.19□□□□□ -0.94
PTPRB-204ENST00000538708 OR4K14Q8NGD5 310 aa9.19□□□□□ -0.94
PTPRB-204ENST00000538708 ASB15Q8WXK1 588 aa9.19□□□□□ -0.94
PTPRB-204ENST00000538708 FGF13Q92913 245 aa9.19□□□□□ -0.94
PTPRB-204ENST00000538708 TESCQ96BS2 214 aa9.19□□□□□ -0.94
PTPRB-204ENST00000538708 PIWIL1Q96J94 861 aaKnown RBP9.19□□□□□ -0.94
PTPRB-204ENST00000538708 SLC29A3Q9BZD2 475 aa9.19□□□□□ -0.94
PTPRB-204ENST00000538708 LINC00597Q9H2U6 94 aa9.19□□□□□ -0.94
PTPRB-204ENST00000538708 ANXA2P2A6NMY6 339 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 RNF13O43567 381 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 MPZL2O60487 215 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 AHSA1O95433 338 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 ANXA2P07355 339 aaKnown RBP9.18□□□□□ -0.94
PTPRB-204ENST00000538708 HRH2P25021 359 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 OR2B6P58173 313 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 NLGN4XQ8N0W4 816 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 OR1F2PQ96R84 312 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 SLCO1B3Q9NPD5 702 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 DIABLOQ9NR28 239 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 TAS2R9Q9NYW1 312 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 PCDHGB7Q9Y5F8 929 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 RRP8O43159 456 aaKnown RBP9.18□□□□□ -0.94
PTPRB-204ENST00000538708 ZBTB11O95625 1053 aaPredicted RBP9.18□□□□□ -0.94
PTPRB-204ENST00000538708 FAUP35544 74 aaKnown RBP9.18□□□□□ -0.94
PTPRB-204ENST00000538708 TMED10P49755 219 aaKnown RBP9.18□□□□□ -0.94
PTPRB-204ENST00000538708 PLP2Q04941 152 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 FCHO2Q0JRZ9 810 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 OLIG2Q13516 323 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 LRP8Q14114 963 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 ANKRD54Q6NXT1 300 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 DRICH1Q6PGQ1 229 aaPredicted RBP9.18□□□□□ -0.94
PTPRB-204ENST00000538708 EID2Q8N6I1 236 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 HORMAD2Q8N7B1 307 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 MRPL43Q8N983 215 aaKnown RBP9.18□□□□□ -0.94
PTPRB-204ENST00000538708 PDPRQ8NCN5 879 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 TRPV1Q8NER1 839 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 DAZLQ92904 295 aaKnown RBP9.18□□□□□ -0.94
PTPRB-204ENST00000538708 CAMK1GQ96NX5 476 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 COL21A1Q96P44 957 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 TRIM39Q9HCM9 518 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 ST6GALNAC1Q9NSC7 600 aaPredicted RBP9.18□□□□□ -0.94
PTPRB-204ENST00000538708 ENO4A6NNW6 628 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 MATN2O00339 956 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 SNX3O60493 162 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 CBLP22681 906 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 TNFRSF4P43489 277 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 MTPNP58546 118 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 POU6F2P78424 691 aaPredicted RBP9.18□□□□□ -0.94
PTPRB-204ENST00000538708 MANEAQ5SRI9 462 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 OLFML2AQ68BL7 652 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 AAGABQ6PD74 315 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 TAS1R1Q7RTX1 841 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 CEP97Q8IW35 865 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 TCEAL8Q8IYN2 117 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 UBQLNLQ8IYU4 475 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 GATSQ8NAP1 163 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 DNAJB8Q8NHS0 232 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 TOP1MTQ969P6 601 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 GRHPRQ9UBQ7 328 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.18□□□□□ -0.94
PTPRB-204ENST00000538708 GDF5P43026 501 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 SOX9P48436 509 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 ATP1A4Q13733 1029 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 NPY5RQ15761 445 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 PTCHD3Q3KNS1 767 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 CARD17Q5XLA6 110 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 LRRC57Q8N9N7 239 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 CLEC1AQ8NC01 280 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 MPP4Q96JB8 637 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 ADAD1Q96M93 576 aaKnown RBP9.18□□□□□ -0.94
PTPRB-204ENST00000538708 HSPA12BQ96MM6 686 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 SLC2A13Q96QE2 648 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 TBX5Q99593 518 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 G6PC3Q9BUM1 346 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 CD244Q9BZW8 370 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 RNF11Q9Y3C5 154 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 STYXL1Q9Y6J8 313 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 NUMBLQ9Y6R0 609 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 RGPD5Q99666 1765 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 NWD2Q9ULI1 1742 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 FEZF1A0PJY2 475 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 CYP17A1P05093 508 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 ENGP17813 658 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 GRIA1P42261 906 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 IDH3AP50213 366 aa9.18□□□□□ -0.94
PTPRB-204ENST00000538708 MTTPP55157 894 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms