RNA–Protein interactions for RNA: ENST00000538502.5

SORT1-209, Transcript of sortilin 1, humanhuman

TSL 2 BASIC

Gene SORT1, Length 6,993 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-209ENST00000538502 TM6SF2Q9BZW4 377 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 B3GNT4Q9C0J1 378 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 ELOA3DA6NLF2 546 aaPredicted RBP6.73□□□□□ -1.33
SORT1-209ENST00000538502 PPM1BO75688 479 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 POP4O95707 220 aaKnown RBP6.73□□□□□ -1.33
SORT1-209ENST00000538502 CYP17A1P05093 508 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 CHRM1P11229 460 aaPredicted RBP6.73□□□□□ -1.33
SORT1-209ENST00000538502 ADORA2AP29274 412 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 GLP1RP43220 463 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 ELOA3BQ3SY89 546 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 LCN8Q6JVE9 175 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 APOBEC3HQ6NTF7 200 aaKnown RBP6.73□□□□□ -1.33
SORT1-209ENST00000538502 UGT2A3Q6UWM9 527 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 ATP6V1C2Q8NEY4 427 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 ELOA3Q8NG57 546 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 HAVCR2Q8TDQ0 301 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 ADAM2Q99965 735 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 SEZ6LQ9BYH1 1024 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 ADAMTS6Q9UKP5 1117 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 AP1M2Q9Y6Q5 423 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 PLIN4Q96Q06 1357 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 A0A075B6Q4 140 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 WNT9AO14904 365 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 DLX3O60479 287 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 RBBP9O75884 186 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 ARHGEF15O94989 841 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 OAZ2O95190 189 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 RPS2P15880 293 aaKnown RBP6.73□□□□□ -1.33
SORT1-209ENST00000538502 IL12BP29460 328 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 WEE1P30291 646 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 BMP8BP34820 402 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 CCR8P51685 355 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 ACTA2P62736 377 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 ACTG2P63267 376 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 TDGQ13569 410 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 GANABQ14697 944 aaKnown RBP6.73□□□□□ -1.33
SORT1-209ENST00000538502 SF1Q15637 639 aaKnown RBP6.73□□□□□ -1.33
SORT1-209ENST00000538502 GLT8D1Q68CQ7 371 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 TRMT10BQ6PF06 316 aaKnown RBP6.73□□□□□ -1.33
SORT1-209ENST00000538502 ARL9Q6T311 187 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 BMP8AQ7Z5Y6 402 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 NOXA1Q86UR1 476 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 YIPF7Q8N8F6 280 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 BBS10Q8TAM1 723 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 TESCQ96BS2 214 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 ZNF558Q96NG5 402 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 CNTNAP3BQ96NU0 1288 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 CD180Q99467 661 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 MGAT4CQ9UBM8 478 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 SH2B3Q9UQQ2 575 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 DCCP43146 1447 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 FAM170BA6NMN3 283 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 MANBAO00462 879 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 CLDN5O00501 218 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 PAK4O96013 591 aaPredicted RBP6.73□□□□□ -1.33
SORT1-209ENST00000538502 ELK4P28324 431 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 SLC10A7Q0GE19 358 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 GAS6Q14393 721 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 MSANTD2Q6P1R3 559 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 TLDC1Q6P9B6 456 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 C7orf57Q8NEG2 295 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 OR2L8Q8NGY9 312 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 GATAD2BQ8WXI9 593 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 KIAA1191Q96A73 305 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 AKT1S1Q96B36 256 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 HMCESQ96FZ2 354 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 LRCH3Q96II8 777 aa6.73□□□□□ -1.33
SORT1-209ENST00000538502 RIOK2Q9BVS4 552 aaKnown RBP6.73□□□□□ -1.33
SORT1-209ENST00000538502 CPSF4LA6NMK7 179 aaKnown RBP6.72□□□□□ -1.33
SORT1-209ENST00000538502 RAB5CP51148 216 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 NCBP2P52298 156 aaKnown RBP eCLIP6.72□□□□□ -1.33
SORT1-209ENST00000538502 NRG3P56975 720 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 SLC3A1Q07837 685 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 CD47Q08722 323 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 TRAM2Q15035 370 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 PAFAH1B3Q15102 231 aaKnown RBP6.72□□□□□ -1.33
SORT1-209ENST00000538502 ZNF678Q5SXM1 525 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 FAM117BQ6P1L5 589 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 ZSCAN1Q8NBB4 408 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 TERB2Q8NHR7 220 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 PEX13Q92968 403 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 ARL11Q969Q4 196 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 OR4K3Q96R72 315 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 SAV1Q9H4B6 383 aaPredicted RBP6.72□□□□□ -1.33
SORT1-209ENST00000538502 FAM105AQ9NUU6 356 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 FAM118AQ9NWS6 357 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 HMX3A6NHT5 357 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 SOX30O94993 753 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 MATN4O95460 622 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 PIGRP01833 764 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 FGF3P11487 239 aaPredicted RBP6.72□□□□□ -1.33
SORT1-209ENST00000538502 CERS1P27544 350 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 ETV6P41212 452 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 CYCSP99999 105 aaKnown RBP6.72□□□□□ -1.33
SORT1-209ENST00000538502 GNMTQ14749 295 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 EML3Q32P44 896 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 CYBRD1Q53TN4 286 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 FRG2Q64ET8 278 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 SMARCD3Q6STE5 483 aa6.72□□□□□ -1.33
SORT1-209ENST00000538502 ZNF565Q8N9K5 539 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms