RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 ZDHHC12Q96GR4 267 aa16.32■□□□□ 0.2
SCARB1-205ENST00000538291 ZNF641Q96N77 438 aaPredicted RBP16.32■□□□□ 0.2
SCARB1-205ENST00000538291 EBF4Q9BQW3 602 aa16.32■□□□□ 0.2
SCARB1-205ENST00000538291 FAM120CQ9NX05 1096 aaKnown RBP16.32■□□□□ 0.2
SCARB1-205ENST00000538291 NCDNQ9UBB6 729 aa16.32■□□□□ 0.2
SCARB1-205ENST00000538291 PRAMEF33A0A0G2JMD5 474 aa16.32■□□□□ 0.2
SCARB1-205ENST00000538291 FAM159BA6NKW6 160 aa16.32■□□□□ 0.2
SCARB1-205ENST00000538291 MID1O15344 667 aa16.32■□□□□ 0.2
SCARB1-205ENST00000538291 PRAMEF10O60809 474 aa16.32■□□□□ 0.2
SCARB1-205ENST00000538291 STC1P52823 247 aa16.32■□□□□ 0.2
SCARB1-205ENST00000538291 PON3Q15166 354 aa16.32■□□□□ 0.2
SCARB1-205ENST00000538291 PYHIN1Q6K0P9 492 aa16.32■□□□□ 0.2
SCARB1-205ENST00000538291 ERN2Q76MJ5 926 aaKnown RBP16.32■□□□□ 0.2
SCARB1-205ENST00000538291 PIM3Q86V86 326 aa16.32■□□□□ 0.2
SCARB1-205ENST00000538291 NXPE2Q96DL1 559 aa16.32■□□□□ 0.2
SCARB1-205ENST00000538291 GADD45AP24522 165 aa16.32■□□□□ 0.2
SCARB1-205ENST00000538291 CAPZA1P52907 286 aa16.32■□□□□ 0.2
SCARB1-205ENST00000538291 KCNC3Q14003 757 aa16.32■□□□□ 0.2
SCARB1-205ENST00000538291 GXYLT1Q4G148 440 aa16.32■□□□□ 0.2
SCARB1-205ENST00000538291 TMEM198Q66K66 360 aa16.32■□□□□ 0.2
SCARB1-205ENST00000538291 OR51B5Q9H339 312 aa16.32■□□□□ 0.2
SCARB1-205ENST00000538291 PCDHGA2Q9Y5H1 932 aa16.32■□□□□ 0.2
SCARB1-205ENST00000538291 TRIM64A6NGJ6 449 aa16.32■□□□□ 0.2
SCARB1-205ENST00000538291 AHSGP02765 367 aa16.32■□□□□ 0.2
SCARB1-205ENST00000538291 ACSL1P33121 698 aa16.32■□□□□ 0.2
SCARB1-205ENST00000538291 SELENOVP59797 346 aa16.32■□□□□ 0.2
SCARB1-205ENST00000538291 RPS13P62277 151 aaKnown RBP16.32■□□□□ 0.2
SCARB1-205ENST00000538291 ARSJQ5FYB0 599 aaPredicted RBP16.32■□□□□ 0.2
SCARB1-205ENST00000538291 KBTBD6Q86V97 674 aa16.32■□□□□ 0.2
SCARB1-205ENST00000538291 GFM1Q96RP9 751 aaKnown RBP16.32■□□□□ 0.2
SCARB1-205ENST00000538291 OR8D2Q9GZM6 311 aa16.32■□□□□ 0.2
SCARB1-205ENST00000538291 HRASLS2Q9NWW9 162 aa16.32■□□□□ 0.2
SCARB1-205ENST00000538291 TMA7Q9Y2S6 64 aaKnown RBP16.32■□□□□ 0.2
SCARB1-205ENST00000538291 AGPSO00116 658 aa16.32■□□□□ 0.2
SCARB1-205ENST00000538291 IL33O95760 270 aa16.32■□□□□ 0.2
SCARB1-205ENST00000538291 POLR2CP19387 275 aaPredicted RBP16.32■□□□□ 0.2
SCARB1-205ENST00000538291 DNAJB1P25685 340 aa16.32■□□□□ 0.2
SCARB1-205ENST00000538291 CDKL1Q00532 357 aa16.32■□□□□ 0.2
SCARB1-205ENST00000538291 LIN52Q52LA3 116 aa16.32■□□□□ 0.2
SCARB1-205ENST00000538291 ZNF613Q6PF04 617 aa16.32■□□□□ 0.2
SCARB1-205ENST00000538291 RAB7BQ96AH8 199 aa16.32■□□□□ 0.2
SCARB1-205ENST00000538291 IRS2Q9Y4H2 1338 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 TCRBV7S3A2A0A539 114 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 ZNF630Q2M218 657 aaPredicted RBP16.31■□□□□ 0.2
SCARB1-205ENST00000538291 NFKBIDQ8NI38 313 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 NPY6RQ99463 290 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 FKBP14Q9NWM8 211 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 AJAP1Q9UKB5 411 aaPredicted RBP16.31■□□□□ 0.2
SCARB1-205ENST00000538291 PLAGL1Q9UM63 463 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 LCHNA4D1U4 455 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 C2orf74A8MZ97 194 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 L7N2F9 121 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 EI24O14681 340 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 RPP14O95059 124 aaKnown RBP16.31■□□□□ 0.2
SCARB1-205ENST00000538291 FHP07954 510 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 C8orf89P0DMQ9 161 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 FMO3P31513 532 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 DGKQP52824 942 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 VAMP2P63027 116 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 RPS21P63220 83 aaKnown RBP16.31■□□□□ 0.2
SCARB1-205ENST00000538291 TMEM115Q12893 351 aaPredicted RBP16.31■□□□□ 0.2
SCARB1-205ENST00000538291 KCNJ11Q14654 390 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 TIGD6Q17RP2 521 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 ZSCAN1Q8NBB4 408 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 NR4A3Q92570 626 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 TMCO6Q96DC7 493 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 SCGB3A2Q96PL1 93 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 RBP7Q96R05 134 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 OR2M4Q96R27 311 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 CYP8B1Q9UNU6 501 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 CLDN25C9JDP6 229 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 ZNF878C9JN71 531 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 SOCS5O75159 536 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 EIF5AP63241 154 aaKnown RBP16.31■□□□□ 0.2
SCARB1-205ENST00000538291 PLEKHG6Q3KR16 790 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 OR2T5Q6IEZ7 315 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 OR2T29Q8NH02 315 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 RAB2BQ8WUD1 216 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 KCTD7Q96MP8 289 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 IL4I1Q96RQ9 567 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 CD180Q99467 661 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.31■□□□□ 0.23e-9■□□□□ 10.9
SCARB1-205ENST00000538291 PCDHAC1Q9H158 963 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 SFXN1Q9H9B4 322 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 E7EQ34 232 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 M0QX08 132 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 CNTN5O94779 1100 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 RHOP08100 348 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 HNRNPA1P09651 372 aaKnown RBP eCLIP16.31■□□□□ 0.2
SCARB1-205ENST00000538291 GDF5P43026 501 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 ZNF234Q14588 700 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 SLC9A4Q6AI14 798 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 TICAM1Q8IUC6 712 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 CCDC115Q96NT0 180 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 MALT1Q9UDY8 824 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 GLS2Q9UI32 602 aa16.31■□□□□ 0.2
SCARB1-205ENST00000538291 TCRBV21S2A2A0A5A6 115 aa16.3■□□□□ 0.2
SCARB1-205ENST00000538291 DLX3O60479 287 aa16.3■□□□□ 0.2
SCARB1-205ENST00000538291 PRKD3O94806 890 aa16.3■□□□□ 0.2
SCARB1-205ENST00000538291 GATMP50440 423 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms