RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 CCDC77Q9BR77 488 aa12.49□□□□□ -0.41
CHFR-216ENST00000538235 MESP1Q9BRJ9 268 aa12.49□□□□□ -0.41
CHFR-216ENST00000538235 HAUS8Q9BT25 410 aa12.49□□□□□ -0.41
CHFR-216ENST00000538235 SARGQ9BW04 601 aa12.49□□□□□ -0.41
CHFR-216ENST00000538235 ACTR5Q9H9F9 607 aaPredicted RBP12.49□□□□□ -0.41
CHFR-216ENST00000538235 PPCSQ9HAB8 311 aa12.49□□□□□ -0.41
CHFR-216ENST00000538235 PELI2Q9HAT8 420 aa12.49□□□□□ -0.41
CHFR-216ENST00000538235 TNFRSF12AQ9NP84 129 aa12.49□□□□□ -0.41
CHFR-216ENST00000538235 MKS1Q9NXB0 559 aa12.49□□□□□ -0.41
CHFR-216ENST00000538235 ZNF490Q9ULM2 529 aaPredicted RBP12.49□□□□□ -0.41
CHFR-216ENST00000538235 PCDHB3Q9Y5E6 796 aa12.49□□□□□ -0.41
CHFR-216ENST00000538235 NBEAQ8NFP9 2946 aa12.49□□□□□ -0.41
CHFR-216ENST00000538235 MED13Q9UHV7 2174 aa12.49□□□□□ -0.41
CHFR-216ENST00000538235 A0A087WV48 116 aa12.48□□□□□ -0.41
CHFR-216ENST00000538235 STMND1H3BQB6 276 aa12.48□□□□□ -0.41
CHFR-216ENST00000538235 K7EPI3 171 aa12.48□□□□□ -0.41
CHFR-216ENST00000538235 TYROBPO43914 113 aa12.48□□□□□ -0.41
CHFR-216ENST00000538235 GLRA3O75311 464 aa12.48□□□□□ -0.41
CHFR-216ENST00000538235 SASH3O75995 380 aa12.48□□□□□ -0.41
CHFR-216ENST00000538235 IPO13O94829 963 aaKnown RBP12.48□□□□□ -0.41
CHFR-216ENST00000538235 RPS18P62269 152 aaKnown RBP12.48□□□□□ -0.41
CHFR-216ENST00000538235 TLE3Q04726 772 aa12.48□□□□□ -0.41
CHFR-216ENST00000538235 IFFO1Q0D2I5 559 aa12.48□□□□□ -0.41
CHFR-216ENST00000538235 CASP8Q14790 479 aa12.48□□□□□ -0.41
CHFR-216ENST00000538235 PCLAFQ15004 111 aa12.48□□□□□ -0.41
CHFR-216ENST00000538235 UNC50Q53HI1 259 aa12.48□□□□□ -0.41
CHFR-216ENST00000538235 CEP85LQ5SZL2 805 aa12.48□□□□□ -0.41
CHFR-216ENST00000538235 LGSNQ5TDP6 509 aa12.48□□□□□ -0.41
CHFR-216ENST00000538235 EXOC3L1Q86VI1 746 aa12.48□□□□□ -0.41
CHFR-216ENST00000538235 PDSS2Q86YH6 399 aa12.48□□□□□ -0.41
CHFR-216ENST00000538235 DSELQ8IZU8 1212 aa12.48□□□□□ -0.41
CHFR-216ENST00000538235 TCAIMQ8N3R3 496 aa12.48□□□□□ -0.41
CHFR-216ENST00000538235 TEX9Q8N6V9 391 aa12.48□□□□□ -0.41
CHFR-216ENST00000538235 CSNK1A1LQ8N752 337 aa12.48□□□□□ -0.41
CHFR-216ENST00000538235 AMER2Q8N7J2 671 aa12.48□□□□□ -0.41
CHFR-216ENST00000538235 MFSD9Q8NBP5 474 aa12.48□□□□□ -0.41
CHFR-216ENST00000538235 CREB3L4Q8TEY5 395 aa12.48□□□□□ -0.41
CHFR-216ENST00000538235 ZNF483Q8TF39 744 aaPredicted RBP12.48□□□□□ -0.41
CHFR-216ENST00000538235 KCNE4Q8WWG9 221 aa12.48□□□□□ -0.41
CHFR-216ENST00000538235 CDK15Q96Q40 435 aa12.48□□□□□ -0.41
CHFR-216ENST00000538235 ASPSCR1Q9BZE9 553 aa12.48□□□□□ -0.41
CHFR-216ENST00000538235 ROPN1BQ9BZX4 212 aaPredicted RBP12.48□□□□□ -0.41
CHFR-216ENST00000538235 PCBD2Q9H0N5 130 aa12.48□□□□□ -0.41
CHFR-216ENST00000538235 CHST8Q9H2A9 424 aa12.48□□□□□ -0.41
CHFR-216ENST00000538235 ROPN1Q9HAT0 212 aaPredicted RBP12.48□□□□□ -0.41
CHFR-216ENST00000538235 COPG2Q9UBF2 871 aa12.48□□□□□ -0.41
CHFR-216ENST00000538235 SNX7Q9UNH6 387 aa12.48□□□□□ -0.41
CHFR-216ENST00000538235 CACNA1GO43497 2377 aa12.48□□□□□ -0.41
CHFR-216ENST00000538235 TRBC2A0A5B9 178 aa12.47□□□□□ -0.41
CHFR-216ENST00000538235 TMEM8BA6NDV4 472 aa12.47□□□□□ -0.41
CHFR-216ENST00000538235 STX16-NPEPL1H3BU86 382 aa12.47□□□□□ -0.41
CHFR-216ENST00000538235 STX16O14662 325 aa12.47□□□□□ -0.41
CHFR-216ENST00000538235 CPNE3O75131 537 aaKnown RBP12.47□□□□□ -0.41
CHFR-216ENST00000538235 WFS1O76024 890 aa12.47□□□□□ -0.41
CHFR-216ENST00000538235 EIF2S1P05198 315 aaKnown RBP12.47□□□□□ -0.41
CHFR-216ENST00000538235 TUBBP07437 444 aa12.47□□□□□ -0.41
CHFR-216ENST00000538235 GSTA1P08263 222 aa12.47□□□□□ -0.41
CHFR-216ENST00000538235 RBP1P09455 135 aa12.47□□□□□ -0.41
CHFR-216ENST00000538235 C1GALT1C1LP0DN25 315 aa12.47□□□□□ -0.41
CHFR-216ENST00000538235 ARRB2P32121 409 aa12.47□□□□□ -0.41
CHFR-216ENST00000538235 CRHR1P34998 444 aa12.47□□□□□ -0.41
CHFR-216ENST00000538235 PIK3CGP48736 1102 aa12.47□□□□□ -0.41
CHFR-216ENST00000538235 CCR8P51685 355 aa12.47□□□□□ -0.41
CHFR-216ENST00000538235 CDH13P55290 713 aa12.47□□□□□ -0.41
CHFR-216ENST00000538235 RELAQ04206 551 aa12.47□□□□□ -0.41
CHFR-216ENST00000538235 CHIT1Q13231 466 aa12.47□□□□□ -0.41
CHFR-216ENST00000538235 ST3GAL2Q16842 350 aa12.47□□□□□ -0.41
CHFR-216ENST00000538235 ATP1A1-AS1Q5TC04 95 aa12.47□□□□□ -0.41
CHFR-216ENST00000538235 ATG9BQ674R7 924 aa12.47□□□□□ -0.41
CHFR-216ENST00000538235 RHBDD2Q6NTF9 364 aa12.47□□□□□ -0.41
CHFR-216ENST00000538235 KLC3Q6P597 504 aa12.47□□□□□ -0.41
CHFR-216ENST00000538235 CACNA2D3Q8IZS8 1091 aa12.47□□□□□ -0.41
CHFR-216ENST00000538235 NLGN4XQ8N0W4 816 aa12.47□□□□□ -0.41
CHFR-216ENST00000538235 ZNF248Q8NDW4 579 aa12.47□□□□□ -0.41
CHFR-216ENST00000538235 NLGN4YQ8NFZ3 816 aaPredicted RBP12.47□□□□□ -0.41
CHFR-216ENST00000538235 OR8K5Q8NH50 307 aa12.47□□□□□ -0.41
CHFR-216ENST00000538235 ZCCHC10Q8TBK6 192 aa12.47□□□□□ -0.41
CHFR-216ENST00000538235 ZPBPQ9BS86 351 aa12.47□□□□□ -0.41
CHFR-216ENST00000538235 MECRQ9BV79 373 aa12.47□□□□□ -0.41
CHFR-216ENST00000538235 C1QTNF3Q9BXJ4 246 aa12.47□□□□□ -0.41
CHFR-216ENST00000538235 GSTO2Q9H4Y5 243 aa12.47□□□□□ -0.41
CHFR-216ENST00000538235 KLHL31Q9H511 634 aa12.47□□□□□ -0.41
CHFR-216ENST00000538235 CPNE5Q9HCH3 593 aa12.47□□□□□ -0.41
CHFR-216ENST00000538235 LHX9Q9NQ69 397 aa12.47□□□□□ -0.41
CHFR-216ENST00000538235 CUTCQ9NTM9 273 aa12.47□□□□□ -0.41
CHFR-216ENST00000538235 OPTCQ9UBM4 332 aa12.47□□□□□ -0.41
CHFR-216ENST00000538235 CROTQ9UKG9 612 aa12.47□□□□□ -0.41
CHFR-216ENST00000538235 DYRK1BQ9Y463 629 aa12.47□□□□□ -0.41
CHFR-216ENST00000538235 CCDC189A1A4V9 331 aa12.46□□□□□ -0.41
CHFR-216ENST00000538235 PABPN1LA6NDY0 278 aaKnown RBP12.46□□□□□ -0.41
CHFR-216ENST00000538235 SYCE1LA8MT33 242 aa12.46□□□□□ -0.41
CHFR-216ENST00000538235 MEN1O00255 615 aa12.46□□□□□ -0.41
CHFR-216ENST00000538235 UBFD1O14562 309 aaKnown RBP12.46□□□□□ -0.41
CHFR-216ENST00000538235 KLK10O43240 276 aa12.46□□□□□ -0.41
CHFR-216ENST00000538235 OR1F1O43749 312 aa12.46□□□□□ -0.41
CHFR-216ENST00000538235 S100BP04271 92 aaPredicted RBP12.46□□□□□ -0.41
CHFR-216ENST00000538235 FURINP09958 794 aa12.46□□□□□ -0.41
CHFR-216ENST00000538235 CD82P27701 267 aa12.46□□□□□ -0.41
CHFR-216ENST00000538235 HNRNPH1P31943 449 aaKnown RBP12.46□□□□□ -0.41
CHFR-216ENST00000538235 ETV4P43268 484 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms