RNA–Protein interactions for RNA: ENST00000537429.5

HMGA2-208, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,527 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-208ENST00000537429 PCDHGA4Q9Y5G9 962 aa23.21■■□□□ 1.31
HMGA2-208ENST00000537429 ADAMTS20P59510 1910 aa23.21■■□□□ 1.31
HMGA2-208ENST00000537429 TMX2-CTNND1H3BSU7 103 aa23.2■■□□□ 1.3
HMGA2-208ENST00000537429 HGSO14964 777 aaPredicted RBP23.2■■□□□ 1.3
HMGA2-208ENST00000537429 AZIN1O14977 448 aa23.2■■□□□ 1.3
HMGA2-208ENST00000537429 UROSP10746 265 aa23.2■■□□□ 1.3
HMGA2-208ENST00000537429 KCNAB1Q14722 419 aa23.2■■□□□ 1.3
HMGA2-208ENST00000537429 CLYBLQ8N0X4 340 aa23.2■■□□□ 1.3
HMGA2-208ENST00000537429 CACTIN-AS1Q8N1I8 211 aa23.2■■□□□ 1.3
HMGA2-208ENST00000537429 MFSD9Q8NBP5 474 aa23.2■■□□□ 1.3
HMGA2-208ENST00000537429 WDR20Q8TBZ3 569 aa23.2■■□□□ 1.3
HMGA2-208ENST00000537429 AGR3Q8TD06 166 aa23.2■■□□□ 1.3
HMGA2-208ENST00000537429 THAP11Q96EK4 314 aa23.2■■□□□ 1.3
HMGA2-208ENST00000537429 C7orf26Q96N11 449 aa23.2■■□□□ 1.3
HMGA2-208ENST00000537429 SLC29A3Q9BZD2 475 aa23.2■■□□□ 1.3
HMGA2-208ENST00000537429 STRADBQ9C0K7 418 aa23.2■■□□□ 1.3
HMGA2-208ENST00000537429 RHBGQ9H310 441 aa23.2■■□□□ 1.3
HMGA2-208ENST00000537429 TSC22D4Q9Y3Q8 395 aa23.2■■□□□ 1.3
HMGA2-208ENST00000537429 TCP11X1B4DZS4 312 aa23.19■■□□□ 1.3
HMGA2-208ENST00000537429 FFAR3O14843 346 aa23.19■■□□□ 1.3
HMGA2-208ENST00000537429 GPR42O15529 346 aa23.19■■□□□ 1.3
HMGA2-208ENST00000537429 CSO75390 466 aaKnown RBP23.19■■□□□ 1.3
HMGA2-208ENST00000537429 FOLR1P15328 257 aa23.19■■□□□ 1.3
HMGA2-208ENST00000537429 HMOX2P30519 316 aa23.19■■□□□ 1.3
HMGA2-208ENST00000537429 CSTF2P33240 577 aaKnown RBP eCLIP23.19■■□□□ 1.34e-7■■■■□ 19.8
HMGA2-208ENST00000537429 AHRP35869 848 aa23.19■■□□□ 1.3
HMGA2-208ENST00000537429 CYP4F3Q08477 520 aa23.19■■□□□ 1.3
HMGA2-208ENST00000537429 TMTC4Q5T4D3 741 aa23.19■■□□□ 1.3
HMGA2-208ENST00000537429 CLEC6AQ6EIG7 209 aa23.19■■□□□ 1.3
HMGA2-208ENST00000537429 FRMPD2BQ6IN97 320 aa23.19■■□□□ 1.3
HMGA2-208ENST00000537429 MCATQ8IVS2 390 aaKnown RBP23.19■■□□□ 1.3
HMGA2-208ENST00000537429 AGBL5Q8NDL9 886 aa23.19■■□□□ 1.3
HMGA2-208ENST00000537429 ADAMTS14Q8WXS8 1223 aa23.19■■□□□ 1.3
HMGA2-208ENST00000537429 PRM3Q9NNZ6 103 aa23.19■■□□□ 1.3
HMGA2-208ENST00000537429 ZFP69BQ9UJL9 534 aa23.19■■□□□ 1.3
HMGA2-208ENST00000537429 SNX6Q9UNH7 406 aa23.19■■□□□ 1.3
HMGA2-208ENST00000537429 AP1M2Q9Y6Q5 423 aa23.19■■□□□ 1.3
HMGA2-208ENST00000537429 MDC1Q14676 2089 aaKnown RBP23.19■■□□□ 1.3
HMGA2-208ENST00000537429 TMEM233B4DJY2 109 aa23.18■■□□□ 1.3
HMGA2-208ENST00000537429 CRCPO75575 148 aa23.18■■□□□ 1.3
HMGA2-208ENST00000537429 SERPINB3P29508 390 aa23.18■■□□□ 1.3
HMGA2-208ENST00000537429 DEFB110Q30KQ9 67 aa23.18■■□□□ 1.3
HMGA2-208ENST00000537429 UGT3A2Q3SY77 523 aa23.18■■□□□ 1.3
HMGA2-208ENST00000537429 TCHHL1Q5QJ38 904 aaPredicted RBP23.18■■□□□ 1.3
HMGA2-208ENST00000537429 KANK2Q63ZY3 851 aa23.18■■□□□ 1.3
HMGA2-208ENST00000537429 FRG2Q64ET8 278 aa23.18■■□□□ 1.3
HMGA2-208ENST00000537429 ADNP2Q6IQ32 1131 aa23.18■■□□□ 1.3
HMGA2-208ENST00000537429 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP23.18■■□□□ 1.3
HMGA2-208ENST00000537429 CHCHD4Q8N4Q1 142 aa23.18■■□□□ 1.3
HMGA2-208ENST00000537429 TTLQ8NG68 377 aa23.18■■□□□ 1.3
HMGA2-208ENST00000537429 REPS1Q96D71 796 aa23.18■■□□□ 1.3
HMGA2-208ENST00000537429 SEC16BQ96JE7 1060 aa23.18■■□□□ 1.3
HMGA2-208ENST00000537429 FRG2BQ96QU4 278 aa23.18■■□□□ 1.3
HMGA2-208ENST00000537429 SIDT1Q9NXL6 827 aaKnown RBP23.18■■□□□ 1.3
HMGA2-208ENST00000537429 AKAP7Q9P0M2 348 aaPredicted RBP23.18■■□□□ 1.3
HMGA2-208ENST00000537429 PLCL2Q9UPR0 1127 aa23.18■■□□□ 1.3
HMGA2-208ENST00000537429 LOC105369274A0A096LPK9 316 aa23.18■■□□□ 1.3
HMGA2-208ENST00000537429 LOC102723532A0A0G2JNH3 316 aa23.18■■□□□ 1.3
HMGA2-208ENST00000537429 SRPX2O60687 465 aaPredicted RBP23.18■■□□□ 1.3
HMGA2-208ENST00000537429 GSTM2P28161 218 aa23.18■■□□□ 1.3
HMGA2-208ENST00000537429 RPL14P50914 215 aaKnown RBP23.18■■□□□ 1.3
HMGA2-208ENST00000537429 PUM1Q14671 1186 aaKnown RBP eCLIP23.18■■□□□ 1.3
HMGA2-208ENST00000537429 VN1R5Q7Z5H4 357 aa23.18■■□□□ 1.3
HMGA2-208ENST00000537429 VN1R4Q7Z5H5 301 aa23.18■■□□□ 1.3
HMGA2-208ENST00000537429 TMPRSS12Q86WS5 348 aa23.18■■□□□ 1.3
HMGA2-208ENST00000537429 KIRREL3Q8IZU9 778 aa23.18■■□□□ 1.3
HMGA2-208ENST00000537429 OR4N4Q8N0Y3 316 aa23.18■■□□□ 1.3
HMGA2-208ENST00000537429 N4BP2L2Q92802 583 aaPredicted RBP23.18■■□□□ 1.3
HMGA2-208ENST00000537429 TM4SF19Q96DZ7 209 aa23.18■■□□□ 1.3
HMGA2-208ENST00000537429 ELOVL6Q9H5J4 265 aa23.18■■□□□ 1.3
HMGA2-208ENST00000537429 PNPOQ9NVS9 261 aa23.18■■□□□ 1.3
HMGA2-208ENST00000537429 DNAJC15Q9Y5T4 150 aa23.18■■□□□ 1.3
HMGA2-208ENST00000537429 DCHS1Q96JQ0 3298 aa23.17■■□□□ 1.3
HMGA2-208ENST00000537429 ANKDD1BA6NHY2 528 aa23.17■■□□□ 1.3
HMGA2-208ENST00000537429 H0YGG7 62 aa23.17■■□□□ 1.3
HMGA2-208ENST00000537429 MANBAO00462 879 aa23.17■■□□□ 1.3
HMGA2-208ENST00000537429 KRT6AP02538 564 aa23.17■■□□□ 1.3
HMGA2-208ENST00000537429 KRT6BP04259 564 aa23.17■■□□□ 1.3
HMGA2-208ENST00000537429 PCNAP12004 261 aa23.17■■□□□ 1.3
HMGA2-208ENST00000537429 KRT6CP48668 564 aa23.17■■□□□ 1.3
HMGA2-208ENST00000537429 NEK2P51955 445 aa23.17■■□□□ 1.3
HMGA2-208ENST00000537429 ARF3P61204 181 aaPredicted RBP23.17■■□□□ 1.3
HMGA2-208ENST00000537429 IFT88Q13099 833 aa23.17■■□□□ 1.3
HMGA2-208ENST00000537429 C10orf62Q5T681 223 aaPredicted RBP23.17■■□□□ 1.3
HMGA2-208ENST00000537429 FAM47EQ6ZV65 393 aa23.17■■□□□ 1.3
HMGA2-208ENST00000537429 CRLF3Q8IUI8 442 aa23.17■■□□□ 1.3
HMGA2-208ENST00000537429 HOMEZQ8IX15 550 aa23.17■■□□□ 1.3
HMGA2-208ENST00000537429 HUS1BQ8NHY5 278 aa23.17■■□□□ 1.3
HMGA2-208ENST00000537429 CREB3L4Q8TEY5 395 aa23.17■■□□□ 1.3
HMGA2-208ENST00000537429 USP7Q93009 1102 aa23.17■■□□□ 1.3
HMGA2-208ENST00000537429 MTFMTQ96DP5 389 aaKnown RBP23.17■■□□□ 1.3
HMGA2-208ENST00000537429 LIN37Q96GY3 246 aaPredicted RBP23.17■■□□□ 1.3
HMGA2-208ENST00000537429 ZNF285Q96NJ3 590 aa23.17■■□□□ 1.3
HMGA2-208ENST00000537429 CMKLR1Q99788 373 aa23.17■■□□□ 1.3
HMGA2-208ENST00000537429 FARSBQ9NSD9 589 aaKnown RBP23.17■■□□□ 1.3
HMGA2-208ENST00000537429 OCIAD1Q9NX40 245 aa23.17■■□□□ 1.3
HMGA2-208ENST00000537429 ADGRE2Q9UHX3 823 aa23.17■■□□□ 1.3
HMGA2-208ENST00000537429 FIS1Q9Y3D6 152 aa23.17■■□□□ 1.3
HMGA2-208ENST00000537429 ULK1O75385 1050 aa23.16■■□□□ 1.3
HMGA2-208ENST00000537429 PIK3CBP42338 1070 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms