RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 DPP3Q9NY33 737 aa5.22□□□□□ -1.57
CLIP1-207ENST00000536634 KCND2Q9NZV8 630 aa5.22□□□□□ -1.57
CLIP1-207ENST00000536634 MPP6Q9NZW5 540 aa5.22□□□□□ -1.57
CLIP1-207ENST00000536634 DEC1Q9P2X7 70 aa5.22□□□□□ -1.57
CLIP1-207ENST00000536634 SARDHQ9UL12 918 aa5.22□□□□□ -1.57
CLIP1-207ENST00000536634 A4GNTQ9UNA3 340 aa5.22□□□□□ -1.57
CLIP1-207ENST00000536634 C2CD2Q9Y426 696 aa5.22□□□□□ -1.57
CLIP1-207ENST00000536634 SCINQ9Y6U3 715 aa5.22□□□□□ -1.57
CLIP1-207ENST00000536634 POLQO75417 2590 aa5.22□□□□□ -1.57
CLIP1-207ENST00000536634 ICE1Q9Y2F5 2266 aa5.22□□□□□ -1.57
CLIP1-207ENST00000536634 A0A087WYN8 130 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 ANKRD63C9JTQ0 380 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 TULP2O00295 520 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 SLC9A3R1O14745 358 aaPredicted RBP5.21□□□□□ -1.58
CLIP1-207ENST00000536634 JAK2O60674 1132 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 PFKFB2O60825 505 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 SEC31AO94979 1220 aaKnown RBP5.21□□□□□ -1.58
CLIP1-207ENST00000536634 PIGRP01833 764 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 MBL2P11226 248 aaPredicted RBP5.21□□□□□ -1.58
CLIP1-207ENST00000536634 CD58P19256 250 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 BDNFP23560 247 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 PAX3P23760 479 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 LMO2P25791 158 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 ADSSP30520 456 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 PAFAH1B1P43034 410 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 ACADVLP49748 655 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 LIG4P49917 911 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 TPMTP51580 245 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 ZNF155Q12901 538 aaPredicted RBP5.21□□□□□ -1.58
CLIP1-207ENST00000536634 TAF10Q12962 218 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 PTP4A2Q12974 167 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 IL17AQ16552 155 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 ZNF718Q3SXZ3 478 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 ATP13A5Q4VNC0 1218 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 WDR73Q6P4I2 378 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 FAM171BQ6P995 826 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 QSOX2Q6ZRP7 698 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 DENND5BQ6ZUT9 1274 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 CUZD1Q86UP6 607 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 ZNF441Q8N8Z8 693 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 NECAB1Q8N987 351 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 CADM4Q8NFZ8 388 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 SPATA22Q8NHS9 363 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 HUS1BQ8NHY5 278 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 TANKQ92844 425 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 WBP1Q96G27 269 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 SPATA17Q96L03 361 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 TSPAN18Q96SJ8 248 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 CNGB3Q9NQW8 809 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 SPHK2Q9NRA0 654 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 DNAJC17Q9NVM6 304 aaKnown RBP5.21□□□□□ -1.58
CLIP1-207ENST00000536634 SMARCAL1Q9NZC9 954 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 ZNF224Q9NZL3 707 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 C1RLQ9NZP8 487 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 LRWD1Q9UFC0 647 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 IL17BQ9UHF5 180 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 FBXO9Q9UK97 447 aaPredicted RBP5.21□□□□□ -1.58
CLIP1-207ENST00000536634 RCOR1Q9UKL0 485 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 NME7Q9Y5B8 376 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 PCDHGA1Q9Y5H4 931 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 ADGRG4Q8IZF6 3080 aa5.21□□□□□ -1.58
CLIP1-207ENST00000536634 SETD2Q9BYW2 2564 aaPredicted RBP5.2□□□□□ -1.58
CLIP1-207ENST00000536634 TMEM202A6NGA9 273 aa5.2□□□□□ -1.58
CLIP1-207ENST00000536634 PRAC2D3DTV9 90 aa5.2□□□□□ -1.58
CLIP1-207ENST00000536634 NEDD8-MDP1E9PL57 170 aa5.2□□□□□ -1.58
CLIP1-207ENST00000536634 F8VP50 259 aa5.2□□□□□ -1.58
CLIP1-207ENST00000536634 CLGNO14967 610 aa5.2□□□□□ -1.58
CLIP1-207ENST00000536634 MID1O15344 667 aa5.2□□□□□ -1.58
CLIP1-207ENST00000536634 PAPSS1O43252 624 aaPredicted RBP5.2□□□□□ -1.58
CLIP1-207ENST00000536634 COCHO43405 550 aa5.2□□□□□ -1.58
CLIP1-207ENST00000536634 CACNG3O60359 315 aa5.2□□□□□ -1.58
CLIP1-207ENST00000536634 LDB3O75112 727 aa5.2□□□□□ -1.58
CLIP1-207ENST00000536634 ZNF432O94892 652 aa5.2□□□□□ -1.58
CLIP1-207ENST00000536634 IGLV3-19P01714 112 aa5.2□□□□□ -1.58
CLIP1-207ENST00000536634 IRF1P10914 325 aa5.2□□□□□ -1.58
CLIP1-207ENST00000536634 MAGEA11P43364 429 aa5.2□□□□□ -1.58
CLIP1-207ENST00000536634 PGFP49763 221 aa5.2□□□□□ -1.58
CLIP1-207ENST00000536634 SLC12A3P55017 1021 aa5.2□□□□□ -1.58
CLIP1-207ENST00000536634 DLX5P56178 289 aa5.2□□□□□ -1.58
CLIP1-207ENST00000536634 IRX6P78412 446 aaPredicted RBP5.2□□□□□ -1.58
CLIP1-207ENST00000536634 MYL7Q01449 175 aa5.2□□□□□ -1.58
CLIP1-207ENST00000536634 KYAT1Q16773 422 aa5.2□□□□□ -1.58
CLIP1-207ENST00000536634 ZNF672Q499Z4 452 aaPredicted RBP5.2□□□□□ -1.58
CLIP1-207ENST00000536634 WBP2NLQ6ICG8 309 aa5.2□□□□□ -1.58
CLIP1-207ENST00000536634 Q6ZTC4 211 aa5.2□□□□□ -1.58
CLIP1-207ENST00000536634 ZNF771Q7L3S4 317 aaPredicted RBP5.2□□□□□ -1.58
CLIP1-207ENST00000536634 CD302Q8IX05 232 aa5.2□□□□□ -1.58
CLIP1-207ENST00000536634 ADGRF2Q8IZF7 708 aa5.2□□□□□ -1.58
CLIP1-207ENST00000536634 SCFD1Q8WVM8 642 aa5.2□□□□□ -1.58
CLIP1-207ENST00000536634 SORCS1Q8WY21 1168 aa5.2□□□□□ -1.58
CLIP1-207ENST00000536634 IGSF8Q969P0 613 aa5.2□□□□□ -1.58
CLIP1-207ENST00000536634 MED8Q96G25 268 aa5.2□□□□□ -1.58
CLIP1-207ENST00000536634 CNDP2Q96KP4 475 aaKnown RBP5.2□□□□□ -1.58
CLIP1-207ENST00000536634 ZNF560Q96MR9 790 aa5.2□□□□□ -1.58
CLIP1-207ENST00000536634 ZNF385AQ96PM9 386 aaKnown RBP5.2□□□□□ -1.58
CLIP1-207ENST00000536634 LGMNQ99538 433 aa5.2□□□□□ -1.58
CLIP1-207ENST00000536634 PLIN2Q99541 437 aa5.2□□□□□ -1.58
CLIP1-207ENST00000536634 H2AFJQ9BTM1 129 aa5.2□□□□□ -1.58
CLIP1-207ENST00000536634 PAIP1Q9H074 479 aaKnown RBP5.2□□□□□ -1.58
CLIP1-207ENST00000536634 TM9SF3Q9HD45 589 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms