RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 PCNAP12004 261 aa17.38■□□□□ 0.37
RAB40C-203ENST00000535977 ACPPP15309 386 aa17.38■□□□□ 0.37
RAB40C-203ENST00000535977 PSMB9P28065 219 aa17.38■□□□□ 0.37
RAB40C-203ENST00000535977 GABRR2P28476 465 aa17.38■□□□□ 0.37
RAB40C-203ENST00000535977 HTR2BP41595 481 aa17.38■□□□□ 0.37
RAB40C-203ENST00000535977 USP39Q53GS9 565 aaKnown RBP17.38■□□□□ 0.37
RAB40C-203ENST00000535977 ANKRD34AQ69YU3 496 aa17.38■□□□□ 0.37
RAB40C-203ENST00000535977 ZNF438Q7Z4V0 828 aa17.38■□□□□ 0.37
RAB40C-203ENST00000535977 GPR26Q8NDV2 337 aa17.38■□□□□ 0.37
RAB40C-203ENST00000535977 OR52E6Q96RD3 313 aa17.38■□□□□ 0.37
RAB40C-203ENST00000535977 SLC12A9Q9BXP2 914 aa17.38■□□□□ 0.37
RAB40C-203ENST00000535977 C6orf62Q9GZU0 229 aaPredicted RBP17.38■□□□□ 0.37
RAB40C-203ENST00000535977 MAGIXQ9H6Y5 334 aa17.38■□□□□ 0.37
RAB40C-203ENST00000535977 ACTR8Q9H981 624 aa17.38■□□□□ 0.37
RAB40C-203ENST00000535977 ADGRE2Q9UHX3 823 aa17.38■□□□□ 0.37
RAB40C-203ENST00000535977 NEUROG3Q9Y4Z2 214 aa17.38■□□□□ 0.37
RAB40C-203ENST00000535977 TRAV19A0A0A6YYK7 116 aa17.37■□□□□ 0.37
RAB40C-203ENST00000535977 SERTM1A2A2V5 107 aa17.37■□□□□ 0.37
RAB40C-203ENST00000535977 NPIPB15A6NHN6 443 aaPredicted RBP17.37■□□□□ 0.37
RAB40C-203ENST00000535977 NPIPB8E9PQR5 432 aa17.37■□□□□ 0.37
RAB40C-203ENST00000535977 HAT1O14929 419 aa17.37■□□□□ 0.37
RAB40C-203ENST00000535977 RETP07949 1114 aa17.37■□□□□ 0.37
RAB40C-203ENST00000535977 HIST1H2AGP0C0S8 130 aaPredicted RBP17.37■□□□□ 0.37
RAB40C-203ENST00000535977 HIST1H2ADP20671 130 aa17.37■□□□□ 0.37
RAB40C-203ENST00000535977 PRPH2P23942 346 aa17.37■□□□□ 0.37
RAB40C-203ENST00000535977 CLDN8P56748 225 aa17.37■□□□□ 0.37
RAB40C-203ENST00000535977 PTGR1Q14914 329 aa17.37■□□□□ 0.37
RAB40C-203ENST00000535977 ZNF404Q494X3 552 aa17.37■□□□□ 0.37
RAB40C-203ENST00000535977 YIF1BQ5BJH7 314 aa17.37■□□□□ 0.37
RAB40C-203ENST00000535977 FAM109AQ8N4B1 249 aa17.37■□□□□ 0.37
RAB40C-203ENST00000535977 MCOLN3Q8TDD5 553 aa17.37■□□□□ 0.37
RAB40C-203ENST00000535977 ZHX1-C8orf76Q96EF9 292 aa17.37■□□□□ 0.37
RAB40C-203ENST00000535977 HIST1H2AHQ96KK5 128 aa17.37■□□□□ 0.37
RAB40C-203ENST00000535977 MCCC1Q96RQ3 725 aaPredicted RBP17.37■□□□□ 0.37
RAB40C-203ENST00000535977 HIST1H2AJQ99878 128 aa17.37■□□□□ 0.37
RAB40C-203ENST00000535977 H2AFJQ9BTM1 129 aa17.37■□□□□ 0.37
RAB40C-203ENST00000535977 TNKS2Q9H2K2 1166 aa17.37■□□□□ 0.37
RAB40C-203ENST00000535977 ARL15Q9NXU5 204 aa17.37■□□□□ 0.37
RAB40C-203ENST00000535977 HS3ST2Q9Y278 367 aa17.37■□□□□ 0.37
RAB40C-203ENST00000535977 C12orf71A8MTZ7 269 aa17.37■□□□□ 0.37
RAB40C-203ENST00000535977 MEN1O00255 615 aa17.37■□□□□ 0.37
RAB40C-203ENST00000535977 POP4O95707 220 aaKnown RBP17.37■□□□□ 0.37
RAB40C-203ENST00000535977 POLR2CP19387 275 aaPredicted RBP17.37■□□□□ 0.37
RAB40C-203ENST00000535977 CD6P30203 668 aa17.37■□□□□ 0.37
RAB40C-203ENST00000535977 GKP32189 559 aa17.37■□□□□ 0.37
RAB40C-203ENST00000535977 ISL1P61371 349 aa17.37■□□□□ 0.37
RAB40C-203ENST00000535977 ZNF33BQ06732 778 aa17.37■□□□□ 0.37
RAB40C-203ENST00000535977 SP140Q13342 867 aa17.37■□□□□ 0.37
RAB40C-203ENST00000535977 BBS7Q8IWZ6 715 aa17.37■□□□□ 0.37
RAB40C-203ENST00000535977 OR10A6Q8NH74 314 aa17.37■□□□□ 0.37
RAB40C-203ENST00000535977 GDF15Q99988 308 aa17.37■□□□□ 0.37
RAB40C-203ENST00000535977 KCNH6Q9H252 994 aa17.37■□□□□ 0.37
RAB40C-203ENST00000535977 ANKHQ9HCJ1 492 aa17.37■□□□□ 0.37
RAB40C-203ENST00000535977 ATP13A2Q9NQ11 1180 aa17.37■□□□□ 0.37
RAB40C-203ENST00000535977 C12orf4Q9NQ89 552 aa17.37■□□□□ 0.37
RAB40C-203ENST00000535977 MAN2B2Q9Y2E5 1009 aa17.37■□□□□ 0.37
RAB40C-203ENST00000535977 PCDHGB1Q9Y5G3 927 aa17.37■□□□□ 0.37
RAB40C-203ENST00000535977 SRCP12931 536 aa17.36■□□□□ 0.37
RAB40C-203ENST00000535977 DDOSTP39656 456 aa17.36■□□□□ 0.37
RAB40C-203ENST00000535977 MTHFRP42898 656 aa17.36■□□□□ 0.37
RAB40C-203ENST00000535977 HMGCS1Q01581 520 aa17.36■□□□□ 0.37
RAB40C-203ENST00000535977 KCNAB2Q13303 367 aa17.36■□□□□ 0.37
RAB40C-203ENST00000535977 SPANXN4Q5MJ08 99 aa17.36■□□□□ 0.37
RAB40C-203ENST00000535977 PNCKQ6P2M8 343 aa17.36■□□□□ 0.37
RAB40C-203ENST00000535977 PRR23CQ6ZRP0 262 aa17.36■□□□□ 0.37
RAB40C-203ENST00000535977 MSANTD1Q6ZTZ1 278 aa17.36■□□□□ 0.37
RAB40C-203ENST00000535977 PARP16Q8N5Y8 322 aa17.36■□□□□ 0.37
RAB40C-203ENST00000535977 TOX2Q96NM4 488 aa17.36■□□□□ 0.37
RAB40C-203ENST00000535977 FARSBQ9NSD9 589 aaKnown RBP17.36■□□□□ 0.37
RAB40C-203ENST00000535977 INVSQ9Y283 1065 aa17.36■□□□□ 0.37
RAB40C-203ENST00000535977 FAM220BPB1ANY3 271 aa17.36■□□□□ 0.37
RAB40C-203ENST00000535977 FAM25AB3EWG3 89 aa17.36■□□□□ 0.37
RAB40C-203ENST00000535977 FAM25CB3EWG5 89 aa17.36■□□□□ 0.37
RAB40C-203ENST00000535977 FAM25GB3EWG6 89 aa17.36■□□□□ 0.37
RAB40C-203ENST00000535977 BCKDHAP12694 445 aa17.36■□□□□ 0.37
RAB40C-203ENST00000535977 AOAHP28039 575 aa17.36■□□□□ 0.37
RAB40C-203ENST00000535977 CD70P32970 193 aa17.36■□□□□ 0.37
RAB40C-203ENST00000535977 RPS14P62263 151 aaKnown RBP17.36■□□□□ 0.37
RAB40C-203ENST00000535977 HSPA14Q0VDF9 509 aa17.36■□□□□ 0.37
RAB40C-203ENST00000535977 GBX1Q14549 363 aa17.36■□□□□ 0.37
RAB40C-203ENST00000535977 SUZ12Q15022 739 aaKnown RBP17.36■□□□□ 0.37
RAB40C-203ENST00000535977 LRIF1Q5T3J3 769 aa17.36■□□□□ 0.37
RAB40C-203ENST00000535977 LRRC66Q68CR7 880 aa17.36■□□□□ 0.37
RAB40C-203ENST00000535977 IDO2Q6ZQW0 420 aa17.36■□□□□ 0.37
RAB40C-203ENST00000535977 TSPAN33Q86UF1 283 aa17.36■□□□□ 0.37
RAB40C-203ENST00000535977 MICU2Q8IYU8 434 aa17.36■□□□□ 0.37
RAB40C-203ENST00000535977 HS3ST5Q8IZT8 346 aa17.36■□□□□ 0.37
RAB40C-203ENST00000535977 KIAA1958Q8N8K9 716 aa17.36■□□□□ 0.37
RAB40C-203ENST00000535977 CNIH3Q8TBE1 160 aa17.36■□□□□ 0.37
RAB40C-203ENST00000535977 TTC9Q92623 222 aa17.36■□□□□ 0.37
RAB40C-203ENST00000535977 ITCHQ96J02 903 aa17.36■□□□□ 0.37
RAB40C-203ENST00000535977 MMP27Q9H306 513 aa17.36■□□□□ 0.37
RAB40C-203ENST00000535977 ZFP14Q9HCL3 533 aa17.36■□□□□ 0.37
RAB40C-203ENST00000535977 LIMD1Q9UGP4 676 aa17.36■□□□□ 0.37
RAB40C-203ENST00000535977 WBP11Q9Y2W2 641 aaKnown RBP17.36■□□□□ 0.37
RAB40C-203ENST00000535977 COL4A6Q14031 1691 aa17.36■□□□□ 0.37
RAB40C-203ENST00000535977 A0A096LPI6 279 aa17.35■□□□□ 0.37
RAB40C-203ENST00000535977 G3V2T6 193 aa17.35■□□□□ 0.37
RAB40C-203ENST00000535977 POLR2LP62875 67 aaKnown RBP17.35■□□□□ 0.37
RAB40C-203ENST00000535977 CLCA4Q14CN2 919 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms