RNA–Protein interactions for RNA: ENST00000535927.5

VAMP1-205, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-205ENST00000535927 OR4F21O95013 312 aa15.56■□□□□ 0.08
VAMP1-205ENST00000535927 HOXB3P14651 431 aaPredicted RBP15.56■□□□□ 0.08
VAMP1-205ENST00000535927 ST6GAL1P15907 406 aa15.56■□□□□ 0.08
VAMP1-205ENST00000535927 GFERP55789 205 aa15.56■□□□□ 0.08
VAMP1-205ENST00000535927 SLBPQ14493 270 aaKnown RBP eCLIP15.56■□□□□ 0.08
VAMP1-205ENST00000535927 YOD1Q5VVQ6 348 aaPredicted RBP15.56■□□□□ 0.08
VAMP1-205ENST00000535927 KANK2Q63ZY3 851 aa15.56■□□□□ 0.08
VAMP1-205ENST00000535927 TTC19Q6DKK2 380 aaPredicted RBP15.56■□□□□ 0.08
VAMP1-205ENST00000535927 FCRL6Q6DN72 434 aa15.56■□□□□ 0.08
VAMP1-205ENST00000535927 LETMD1Q6P1Q0 360 aa15.56■□□□□ 0.08
VAMP1-205ENST00000535927 ADCK2Q7Z695 626 aa15.56■□□□□ 0.08
VAMP1-205ENST00000535927 TMPRSS12Q86WS5 348 aa15.56■□□□□ 0.08
VAMP1-205ENST00000535927 DNAJC22Q8N4W6 341 aa15.56■□□□□ 0.08
VAMP1-205ENST00000535927 CAMKVQ8NCB2 501 aa15.56■□□□□ 0.08
VAMP1-205ENST00000535927 SRFBP1Q8NEF9 429 aaKnown RBP15.56■□□□□ 0.08
VAMP1-205ENST00000535927 OR7G3Q8NG95 312 aa15.56■□□□□ 0.08
VAMP1-205ENST00000535927 RERGQ96A58 199 aaPredicted RBP15.56■□□□□ 0.08
VAMP1-205ENST00000535927 SORT1Q99523 831 aa15.56■□□□□ 0.08
VAMP1-205ENST00000535927 NRTNQ99748 197 aa15.56■□□□□ 0.08
VAMP1-205ENST00000535927 CENPKQ9BS16 269 aa15.56■□□□□ 0.08
VAMP1-205ENST00000535927 B3GNT4Q9C0J1 378 aa15.56■□□□□ 0.08
VAMP1-205ENST00000535927 CUEDC1Q9NWM3 386 aaPredicted RBP15.56■□□□□ 0.08
VAMP1-205ENST00000535927 ZNF225Q9UK10 706 aa15.56■□□□□ 0.08
VAMP1-205ENST00000535927 RNF11Q9Y3C5 154 aa15.56■□□□□ 0.08
VAMP1-205ENST00000535927 PCDHGA4Q9Y5G9 962 aa15.56■□□□□ 0.08
VAMP1-205ENST00000535927 IGHV5-51A0A0C4DH38 117 aa15.55■□□□□ 0.08
VAMP1-205ENST00000535927 NPIPB8E9PQR5 432 aa15.55■□□□□ 0.08
VAMP1-205ENST00000535927 ITM2AO43736 263 aa15.55■□□□□ 0.08
VAMP1-205ENST00000535927 OR1F1O43749 312 aa15.55■□□□□ 0.08
VAMP1-205ENST00000535927 PRAMEF4O60810 478 aa15.55■□□□□ 0.08
VAMP1-205ENST00000535927 EDF1O60869 148 aaKnown RBP15.55■□□□□ 0.08
VAMP1-205ENST00000535927 VPS4BO75351 444 aa15.55■□□□□ 0.08
VAMP1-205ENST00000535927 MT-CO3P00414 261 aa15.55■□□□□ 0.08
VAMP1-205ENST00000535927 CAPN1P07384 714 aa15.55■□□□□ 0.08
VAMP1-205ENST00000535927 CHRNGP07510 517 aa15.55■□□□□ 0.08
VAMP1-205ENST00000535927 SERPINA6P08185 405 aa15.55■□□□□ 0.08
VAMP1-205ENST00000535927 PTX3P26022 381 aaPredicted RBP15.55■□□□□ 0.08
VAMP1-205ENST00000535927 CSTF2P33240 577 aaKnown RBP eCLIP15.55■□□□□ 0.08
VAMP1-205ENST00000535927 MLLT3P42568 568 aaPredicted RBP15.55■□□□□ 0.08
VAMP1-205ENST00000535927 LSSP48449 732 aa15.55■□□□□ 0.08
VAMP1-205ENST00000535927 INSM1Q01101 510 aaPredicted RBP15.55■□□□□ 0.08
VAMP1-205ENST00000535927 CSTF3Q12996 717 aaKnown RBP15.55■□□□□ 0.08
VAMP1-205ENST00000535927 IL11RAQ14626 422 aa15.55■□□□□ 0.08
VAMP1-205ENST00000535927 ZRSR2Q15696 482 aaKnown RBP15.55■□□□□ 0.08
VAMP1-205ENST00000535927 CPSF6Q16630 551 aaKnown RBP eCLIP15.55■□□□□ 0.08
VAMP1-205ENST00000535927 SH2D4BQ5SQS7 431 aa15.55■□□□□ 0.08
VAMP1-205ENST00000535927 PRAMEF9Q5VWM5 478 aa15.55■□□□□ 0.08
VAMP1-205ENST00000535927 TRIM46Q7Z4K8 759 aa15.55■□□□□ 0.08
VAMP1-205ENST00000535927 MYLK4Q86YV6 388 aaPredicted RBP15.55■□□□□ 0.08
VAMP1-205ENST00000535927 PARP9Q8IXQ6 854 aa15.55■□□□□ 0.08
VAMP1-205ENST00000535927 GALNT15Q8N3T1 639 aa15.55■□□□□ 0.08
VAMP1-205ENST00000535927 WDR20Q8TBZ3 569 aa15.55■□□□□ 0.08
VAMP1-205ENST00000535927 CCT6BQ92526 530 aa15.55■□□□□ 0.08
VAMP1-205ENST00000535927 USP7Q93009 1102 aa15.55■□□□□ 0.08
VAMP1-205ENST00000535927 LIN37Q96GY3 246 aaPredicted RBP15.55■□□□□ 0.08
VAMP1-205ENST00000535927 ZNF285Q96NJ3 590 aa15.55■□□□□ 0.08
VAMP1-205ENST00000535927 OR2A5Q96R48 311 aa15.55■□□□□ 0.08
VAMP1-205ENST00000535927 CMKLR1Q99788 373 aa15.55■□□□□ 0.08
VAMP1-205ENST00000535927 SOHLH2Q9NX45 425 aa15.55■□□□□ 0.08
VAMP1-205ENST00000535927 SERTAD3Q9UJW9 196 aa15.55■□□□□ 0.08
VAMP1-205ENST00000535927 ADAM21Q9UKJ8 722 aa15.55■□□□□ 0.08
VAMP1-205ENST00000535927 ATXN7L1Q9ULK2 861 aaPredicted RBP15.55■□□□□ 0.08
VAMP1-205ENST00000535927 ZNF490Q9ULM2 529 aaPredicted RBP15.55■□□□□ 0.08
VAMP1-205ENST00000535927 LAMA1P25391 3075 aa15.54■□□□□ 0.08
VAMP1-205ENST00000535927 TCP11X1B4DZS4 312 aa15.54■□□□□ 0.08
VAMP1-205ENST00000535927 B4E171 279 aa15.54■□□□□ 0.08
VAMP1-205ENST00000535927 SLC28A1O00337 649 aa15.54■□□□□ 0.08
VAMP1-205ENST00000535927 MANBAO00462 879 aa15.54■□□□□ 0.08
VAMP1-205ENST00000535927 PPP6CO00743 305 aa15.54■□□□□ 0.08
VAMP1-205ENST00000535927 HDAC3O15379 428 aa15.54■□□□□ 0.08
VAMP1-205ENST00000535927 FTH1P19P0C7X4 201 aa15.54■□□□□ 0.08
VAMP1-205ENST00000535927 CD22P20273 847 aa15.54■□□□□ 0.08
VAMP1-205ENST00000535927 VARSP26640 1264 aaKnown RBP15.54■□□□□ 0.08
VAMP1-205ENST00000535927 TSPAN7P41732 249 aa15.54■□□□□ 0.08
VAMP1-205ENST00000535927 TSFMP43897 325 aaKnown RBP15.54■□□□□ 0.08
VAMP1-205ENST00000535927 NOVA1P51513 510 aaKnown RBP15.54■□□□□ 0.08
VAMP1-205ENST00000535927 SIM1P81133 766 aaPredicted RBP15.54■□□□□ 0.08
VAMP1-205ENST00000535927 RGS1Q08116 209 aa15.54■□□□□ 0.08
VAMP1-205ENST00000535927 TGM3Q08188 693 aa15.54■□□□□ 0.08
VAMP1-205ENST00000535927 CUL3Q13618 768 aa15.54■□□□□ 0.08
VAMP1-205ENST00000535927 RBBP5Q15291 538 aaKnown RBP15.54■□□□□ 0.08
VAMP1-205ENST00000535927 SMU1Q2TAY7 513 aa15.54■□□□□ 0.08
VAMP1-205ENST00000535927 TMEM35AQ53FP2 167 aa15.54■□□□□ 0.08
VAMP1-205ENST00000535927 GARNL3Q5VVW2 1013 aa15.54■□□□□ 0.08
VAMP1-205ENST00000535927 TLDC1Q6P9B6 456 aa15.54■□□□□ 0.08
VAMP1-205ENST00000535927 CHSY3Q70JA7 882 aa15.54■□□□□ 0.08
VAMP1-205ENST00000535927 MCATQ8IVS2 390 aaKnown RBP15.54■□□□□ 0.08
VAMP1-205ENST00000535927 CDYL2Q8N8U2 506 aa15.54■□□□□ 0.08
VAMP1-205ENST00000535927 DCBLD1Q8N8Z6 715 aa15.54■□□□□ 0.08
VAMP1-205ENST00000535927 ADAMTS14Q8WXS8 1223 aa15.54■□□□□ 0.08
VAMP1-205ENST00000535927 N4BP2L2Q92802 583 aaPredicted RBP15.54■□□□□ 0.08
VAMP1-205ENST00000535927 TM4SF19Q96DZ7 209 aa15.54■□□□□ 0.08
VAMP1-205ENST00000535927 CMTM7Q96FZ5 175 aa15.54■□□□□ 0.08
VAMP1-205ENST00000535927 CHMP6Q96FZ7 201 aa15.54■□□□□ 0.08
VAMP1-205ENST00000535927 CCDC74BQ96LY2 380 aa15.54■□□□□ 0.08
VAMP1-205ENST00000535927 ZNF317Q96PQ6 595 aaPredicted RBP15.54■□□□□ 0.08
VAMP1-205ENST00000535927 SERPINI1Q99574 410 aa15.54■□□□□ 0.08
VAMP1-205ENST00000535927 ZPBPQ9BS86 351 aa15.54■□□□□ 0.08
VAMP1-205ENST00000535927 C20orf27Q9GZN8 174 aa15.54■□□□□ 0.08
VAMP1-205ENST00000535927 NSRP1Q9H0G5 558 aaKnown RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms