RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, human

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRKDC-205	ENST00000535375	GTPBP2	Q9BX10	602 aa	Known RBP	4.19	□□□□□ -1.74
PRKDC-205	ENST00000535375	EGLN3	Q9H6Z9	239 aa		4.19	□□□□□ -1.74
PRKDC-205	ENST00000535375	CCDC177	Q9NQR7	707 aa	Predicted RBP	4.19	□□□□□ -1.74
PRKDC-205	ENST00000535375	TBC1D13	Q9NVG8	400 aa		4.19	□□□□□ -1.74
PRKDC-205	ENST00000535375	PKD2L2	Q9NZM6	624 aa		4.19	□□□□□ -1.74
PRKDC-205	ENST00000535375	WDR35	Q9P2L0	1181 aa		4.19	□□□□□ -1.74
PRKDC-205	ENST00000535375	IL16	Q14005	1332 aa		4.19	□□□□□ -1.74
PRKDC-205	ENST00000535375	P4HA2	O15460	535 aa		4.18	□□□□□ -1.74
PRKDC-205	ENST00000535375	LUC7L3	O95232	432 aa	Known RBP	4.18	□□□□□ -1.74
PRKDC-205	ENST00000535375	SERPING1	P05155	500 aa		4.18	□□□□□ -1.74
PRKDC-205	ENST00000535375	EEF1D	P29692	281 aa	Known RBP	4.18	□□□□□ -1.74
PRKDC-205	ENST00000535375	CLDN15	P56746	228 aa		4.18	□□□□□ -1.74
PRKDC-205	ENST00000535375	RBBP7	Q16576	425 aa		4.18	□□□□□ -1.74
PRKDC-205	ENST00000535375	PTGIS	Q16647	500 aa		4.18	□□□□□ -1.74
PRKDC-205	ENST00000535375	MS4A18	Q3C1V0	323 aa		4.18	□□□□□ -1.74
PRKDC-205	ENST00000535375	CYB5D1	Q6P9G0	228 aa		4.18	□□□□□ -1.74
PRKDC-205	ENST00000535375	ENPP7	Q6UWV6	458 aa		4.18	□□□□□ -1.74
PRKDC-205	ENST00000535375	GDPGP1	Q6ZNW5	385 aa		4.18	□□□□□ -1.74
PRKDC-205	ENST00000535375	CDHR3	Q6ZTQ4	885 aa		4.18	□□□□□ -1.74
PRKDC-205	ENST00000535375	AMIGO1	Q86WK6	493 aa		4.18	□□□□□ -1.74
PRKDC-205	ENST00000535375	CCDC63	Q8NA47	563 aa		4.18	□□□□□ -1.74
PRKDC-205	ENST00000535375	OR6J1	Q8NGC5	347 aa		4.18	□□□□□ -1.74
PRKDC-205	ENST00000535375	NPRL2	Q8WTW4	380 aa		4.18	□□□□□ -1.74
PRKDC-205	ENST00000535375	CHPT1	Q8WUD6	406 aa		4.18	□□□□□ -1.74
PRKDC-205	ENST00000535375	CHURC1	Q8WUH1	139 aa		4.18	□□□□□ -1.74
PRKDC-205	ENST00000535375	FAM218A	Q96MZ4	157 aa		4.18	□□□□□ -1.74
PRKDC-205	ENST00000535375	FOXN4	Q96NZ1	517 aa		4.18	□□□□□ -1.74
PRKDC-205	ENST00000535375	FN3K	Q9H479	309 aa		4.18	□□□□□ -1.74
PRKDC-205	ENST00000535375	HACD3	Q9P035	362 aa		4.18	□□□□□ -1.74
PRKDC-205	ENST00000535375	BAIAP2L1	Q9UHR4	511 aa		4.18	□□□□□ -1.74
PRKDC-205	ENST00000535375	AKAP8L	Q9ULX6	646 aa	Known RBP eCLIP	4.18	□□□□□ -1.74
PRKDC-205	ENST00000535375	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	4.17	□□□□□ -1.74
PRKDC-205	ENST00000535375	URAD	A6NGE7	173 aa		4.17	□□□□□ -1.74
PRKDC-205	ENST00000535375	NPIPB9	F8W1W9	429 aa		4.17	□□□□□ -1.74
PRKDC-205	ENST00000535375	CCL24	O00175	119 aa		4.17	□□□□□ -1.74
PRKDC-205	ENST00000535375	CYTIP	O60759	359 aa		4.17	□□□□□ -1.74
PRKDC-205	ENST00000535375	POP4	O95707	220 aa	Known RBP	4.17	□□□□□ -1.74
PRKDC-205	ENST00000535375	STAG3L1	P0CL83	205 aa		4.17	□□□□□ -1.74
PRKDC-205	ENST00000535375	KRTAP10-3	P60369	221 aa		4.17	□□□□□ -1.74
PRKDC-205	ENST00000535375	ZNF177	Q13360	481 aa	Predicted RBP	4.17	□□□□□ -1.74
PRKDC-205	ENST00000535375	LACTB2	Q53H82	288 aa	Predicted RBP	4.17	□□□□□ -1.74
PRKDC-205	ENST00000535375	KRTAP5-1	Q6L8H4	278 aa		4.17	□□□□□ -1.74
PRKDC-205	ENST00000535375	LRTM2	Q8N967	370 aa		4.17	□□□□□ -1.74
PRKDC-205	ENST00000535375	CAMKV	Q8NCB2	501 aa		4.17	□□□□□ -1.74
PRKDC-205	ENST00000535375	MRPS27	Q92552	414 aa	Known RBP	4.17	□□□□□ -1.74
PRKDC-205	ENST00000535375	EXT2	Q93063	718 aa		4.17	□□□□□ -1.74
PRKDC-205	ENST00000535375	PYCR2	Q96C36	320 aa		4.17	□□□□□ -1.74
PRKDC-205	ENST00000535375	RMDN1	Q96DB5	314 aa		4.17	□□□□□ -1.74
PRKDC-205	ENST00000535375	RIMS4	Q9H426	269 aa	Predicted RBP	4.17	□□□□□ -1.74
PRKDC-205	ENST00000535375	IL36A	Q9UHA7	158 aa		4.17	□□□□□ -1.74
PRKDC-205	ENST00000535375	NPHP3	Q7Z494	1330 aa		4.17	□□□□□ -1.74
PRKDC-205	ENST00000535375	PCNX3	Q9H6A9	2034 aa		4.16	□□□□□ -1.74
PRKDC-205	ENST00000535375	IQCM	A0A1B0GVH7	501 aa		4.16	□□□□□ -1.74
PRKDC-205	ENST00000535375	BAG3	O95817	575 aa		4.16	□□□□□ -1.74
PRKDC-205	ENST00000535375	EPOR	P19235	508 aa		4.16	□□□□□ -1.74
PRKDC-205	ENST00000535375	AOC1	P19801	751 aa		4.16	□□□□□ -1.74
PRKDC-205	ENST00000535375	KRT2	P35908	639 aa		4.16	□□□□□ -1.74
PRKDC-205	ENST00000535375	MTCP1	P56278	107 aa		4.16	□□□□□ -1.74
PRKDC-205	ENST00000535375	FCHO2	Q0JRZ9	810 aa		4.16	□□□□□ -1.74
PRKDC-205	ENST00000535375	TRA2A	Q13595	282 aa	Known RBP eCLIP	4.16	□□□□□ -1.74
PRKDC-205	ENST00000535375	RASA2	Q15283	850 aa		4.16	□□□□□ -1.74
PRKDC-205	ENST00000535375	KYNU	Q16719	465 aa		4.16	□□□□□ -1.74
PRKDC-205	ENST00000535375	SLC30A6	Q6NXT4	461 aa		4.16	□□□□□ -1.74
PRKDC-205	ENST00000535375	SUSD1	Q6UWL2	747 aa		4.16	□□□□□ -1.74
PRKDC-205	ENST00000535375	KRT77	Q7Z794	578 aa		4.16	□□□□□ -1.74
PRKDC-205	ENST00000535375	RPP25	Q9BUL9	199 aa	Known RBP	4.16	□□□□□ -1.74
PRKDC-205	ENST00000535375	RABEP2	Q9H5N1	569 aa		4.16	□□□□□ -1.74
PRKDC-205	ENST00000535375	POLL	Q9UGP5	575 aa		4.16	□□□□□ -1.74
PRKDC-205	ENST00000535375		A0A1W2PPR1	153 aa		4.15	□□□□□ -1.75
PRKDC-205	ENST00000535375		A0A1W2PPW3	197 aa		4.15	□□□□□ -1.75
PRKDC-205	ENST00000535375		K7EQD1	137 aa		4.15	□□□□□ -1.75
PRKDC-205	ENST00000535375	ACAT1	P24752	427 aa	Known RBP	4.15	□□□□□ -1.75
PRKDC-205	ENST00000535375	HOXC13	P31276	330 aa		4.15	□□□□□ -1.75
PRKDC-205	ENST00000535375	SRSF9	Q13242	221 aa	Known RBP eCLIP	4.15	□□□□□ -1.75
PRKDC-205	ENST00000535375	PEX6	Q13608	980 aa		4.15	□□□□□ -1.75
PRKDC-205	ENST00000535375	HIGD2B	Q4VC39	106 aa		4.15	□□□□□ -1.75
PRKDC-205	ENST00000535375	TCP11X2	Q5H9J9	407 aa		4.15	□□□□□ -1.75
PRKDC-205	ENST00000535375	ATP1A1-AS1	Q5TC04	95 aa		4.15	□□□□□ -1.75
PRKDC-205	ENST00000535375	OR4C11	Q6IEV9	310 aa		4.15	□□□□□ -1.75
PRKDC-205	ENST00000535375	PRSS55	Q6UWB4	352 aa	Predicted RBP	4.15	□□□□□ -1.75
PRKDC-205	ENST00000535375	CHST3	Q7LGC8	479 aa		4.15	□□□□□ -1.75
PRKDC-205	ENST00000535375	FAM131B	Q86XD5	332 aa		4.15	□□□□□ -1.75
PRKDC-205	ENST00000535375	CCDC60	Q8IWA6	550 aa	Predicted RBP	4.15	□□□□□ -1.75
PRKDC-205	ENST00000535375	SLC39A11	Q8N1S5	342 aa		4.15	□□□□□ -1.75
PRKDC-205	ENST00000535375	ABHD12	Q8N2K0	398 aa		4.15	□□□□□ -1.75
PRKDC-205	ENST00000535375	POM121L12	Q8N7R1	296 aa		4.15	□□□□□ -1.75
PRKDC-205	ENST00000535375	C17orf47	Q8NEP4	570 aa		4.15	□□□□□ -1.75
PRKDC-205	ENST00000535375	OR52B6	Q8NGF0	335 aa		4.15	□□□□□ -1.75
PRKDC-205	ENST00000535375	OR10G7	Q8NGN6	311 aa		4.15	□□□□□ -1.75
PRKDC-205	ENST00000535375	SEPT1	Q8WYJ6	367 aa		4.15	□□□□□ -1.75
PRKDC-205	ENST00000535375	PDLIM5	Q96HC4	596 aa	Known RBP	4.15	□□□□□ -1.75
PRKDC-205	ENST00000535375	SPATA33	Q96N06	139 aa		4.15	□□□□□ -1.75
PRKDC-205	ENST00000535375	NDN	Q99608	321 aa		4.15	□□□□□ -1.75
PRKDC-205	ENST00000535375	TXLNGY	Q9BZA5	131 aa		4.15	□□□□□ -1.75
PRKDC-205	ENST00000535375	PUS3	Q9BZE2	481 aa	Known RBP	4.15	□□□□□ -1.75
PRKDC-205	ENST00000535375	RAVER2	Q9HCJ3	691 aa	Known RBP	4.15	□□□□□ -1.75
PRKDC-205	ENST00000535375	NLGN3	Q9NZ94	848 aa		4.15	□□□□□ -1.75
PRKDC-205	ENST00000535375	SLC12A6	Q9UHW9	1150 aa		4.15	□□□□□ -1.75
PRKDC-205	ENST00000535375	RARRES3	Q9UL19	164 aa		4.15	□□□□□ -1.75
PRKDC-205	ENST00000535375	ZNF510	Q9Y2H8	683 aa		4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms