RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 GFRA2O00451 464 aa15.38■□□□□ 0.05
MCF2L-232ENST00000535094 ANKRD28O15084 1053 aa15.38■□□□□ 0.05
MCF2L-232ENST00000535094 GSTM1P09488 218 aa15.38■□□□□ 0.05
MCF2L-232ENST00000535094 OR56A5P0C7T3 313 aa15.38■□□□□ 0.05
MCF2L-232ENST00000535094 ZNF544Q6NX49 715 aa15.38■□□□□ 0.05
MCF2L-232ENST00000535094 HMGN2P46Q86SG4 172 aa15.38■□□□□ 0.05
MCF2L-232ENST00000535094 CRISPLD1Q9H336 500 aa15.38■□□□□ 0.05
MCF2L-232ENST00000535094 IL26Q9NPH9 171 aa15.38■□□□□ 0.05
MCF2L-232ENST00000535094 DNAJC11Q9NVH1 559 aa15.38■□□□□ 0.05
MCF2L-232ENST00000535094 PPT2Q9UMR5 302 aa15.38■□□□□ 0.05
MCF2L-232ENST00000535094 IFT52Q9Y366 437 aa15.38■□□□□ 0.05
MCF2L-232ENST00000535094 ATXN8OSP0DMR3 200 aa15.38■□□□□ 0.05
MCF2L-232ENST00000535094 ETFAP13804 333 aa15.38■□□□□ 0.05
MCF2L-232ENST00000535094 CYP2A7P20853 494 aa15.38■□□□□ 0.05
MCF2L-232ENST00000535094 SOX3P41225 446 aa15.38■□□□□ 0.05
MCF2L-232ENST00000535094 CSKP41240 450 aa15.38■□□□□ 0.05
MCF2L-232ENST00000535094 ZNF181Q2M3W8 571 aa15.38■□□□□ 0.05
MCF2L-232ENST00000535094 TIMM50Q3ZCQ8 353 aa15.38■□□□□ 0.05
MCF2L-232ENST00000535094 SNAP47Q5SQN1 464 aa15.38■□□□□ 0.05
MCF2L-232ENST00000535094 MMAAQ8IVH4 418 aaKnown RBP15.38■□□□□ 0.05
MCF2L-232ENST00000535094 YIPF6Q96EC8 236 aa15.38■□□□□ 0.05
MCF2L-232ENST00000535094 OR5M11Q96RB7 305 aa15.38■□□□□ 0.05
MCF2L-232ENST00000535094 CCM2Q9BSQ5 444 aa15.38■□□□□ 0.05
MCF2L-232ENST00000535094 RLIMQ9NVW2 624 aa15.38■□□□□ 0.05
MCF2L-232ENST00000535094 TAS2R9Q9NYW1 312 aa15.38■□□□□ 0.05
MCF2L-232ENST00000535094 EXOC3L2Q2M3D2 409 aa15.38■□□□□ 0.05
MCF2L-232ENST00000535094 RETSATQ6NUM9 610 aa15.38■□□□□ 0.05
MCF2L-232ENST00000535094 NEK5Q6P3R8 708 aa15.38■□□□□ 0.05
MCF2L-232ENST00000535094 GDPD3Q7L5L3 318 aa15.38■□□□□ 0.05
MCF2L-232ENST00000535094 NAGSQ8N159 534 aa15.38■□□□□ 0.05
MCF2L-232ENST00000535094 CYP4Z2PQ8N1L4 340 aa15.38■□□□□ 0.05
MCF2L-232ENST00000535094 DEPDC4Q8N2C3 294 aa15.38■□□□□ 0.05
MCF2L-232ENST00000535094 GGHQ92820 318 aa15.38■□□□□ 0.05
MCF2L-232ENST00000535094 C1GALT1C1Q96EU7 318 aa15.38■□□□□ 0.05
MCF2L-232ENST00000535094 C8orf48Q96LL4 319 aa15.38■□□□□ 0.05
MCF2L-232ENST00000535094 UROC1Q96N76 676 aa15.38■□□□□ 0.05
MCF2L-232ENST00000535094 CRNNQ9UBG3 495 aaPredicted RBP15.38■□□□□ 0.05
MCF2L-232ENST00000535094 OARD1Q9Y530 152 aa15.38■□□□□ 0.05
MCF2L-232ENST00000535094 SIP14410 1827 aa15.38■□□□□ 0.05
MCF2L-232ENST00000535094 LCTP09848 1927 aa15.38■□□□□ 0.05
MCF2L-232ENST00000535094 MTMR11A4FU01 709 aa15.37■□□□□ 0.05
MCF2L-232ENST00000535094 J3KTA2 159 aa15.37■□□□□ 0.05
MCF2L-232ENST00000535094 MYL12BO14950 172 aa15.37■□□□□ 0.05
MCF2L-232ENST00000535094 PRPS1L1P21108 318 aa15.37■□□□□ 0.05
MCF2L-232ENST00000535094 TGM4P49221 684 aa15.37■□□□□ 0.05
MCF2L-232ENST00000535094 PPIGQ13427 754 aaKnown RBP eCLIP15.37■□□□□ 0.054e-7■■■□□ 15.7
MCF2L-232ENST00000535094 IER5LQ5T953 404 aa15.37■□□□□ 0.05
MCF2L-232ENST00000535094 DEF8Q6ZN54 512 aa15.37■□□□□ 0.05
MCF2L-232ENST00000535094 RFLNAQ6ZTI6 216 aa15.37■□□□□ 0.05
MCF2L-232ENST00000535094 NFKBIDQ8NI38 313 aa15.37■□□□□ 0.05
MCF2L-232ENST00000535094 FUBP3Q96I24 572 aaKnown RBP eCLIP15.37■□□□□ 0.05
MCF2L-232ENST00000535094 NEDD4LQ96PU5 975 aa15.37■□□□□ 0.05
MCF2L-232ENST00000535094 ASPNQ9BXN1 380 aa15.37■□□□□ 0.05
MCF2L-232ENST00000535094 MAGIXQ9H6Y5 334 aa15.37■□□□□ 0.05
MCF2L-232ENST00000535094 MOV10Q9HCE1 1003 aaKnown RBP15.37■□□□□ 0.05
MCF2L-232ENST00000535094 KCTD5Q9NXV2 234 aa15.37■□□□□ 0.05
MCF2L-232ENST00000535094 MYO9BQ13459 2157 aa15.37■□□□□ 0.05
MCF2L-232ENST00000535094 SLC38A8A6NNN8 435 aa15.37■□□□□ 0.05
MCF2L-232ENST00000535094 FAM227AF5H4B4 570 aa15.37■□□□□ 0.05
MCF2L-232ENST00000535094 GBX1Q14549 363 aa15.37■□□□□ 0.05
MCF2L-232ENST00000535094 CASP12Q6UXS9 341 aa15.37■□□□□ 0.05
MCF2L-232ENST00000535094 FBXO8Q9NRD0 319 aa15.37■□□□□ 0.05
MCF2L-232ENST00000535094 LYVE1Q9Y5Y7 322 aa15.37■□□□□ 0.05
MCF2L-232ENST00000535094 OR2A25A4D2G3 310 aa15.37■□□□□ 0.05
MCF2L-232ENST00000535094 SMAD6O43541 496 aaKnown RBP15.37■□□□□ 0.05
MCF2L-232ENST00000535094 ITGAMP11215 1152 aa15.37■□□□□ 0.05
MCF2L-232ENST00000535094 SLC19A1P41440 591 aa15.37■□□□□ 0.05
MCF2L-232ENST00000535094 CLCN4P51793 760 aa15.37■□□□□ 0.05
MCF2L-232ENST00000535094 LRRC66Q68CR7 880 aa15.37■□□□□ 0.05
MCF2L-232ENST00000535094 TMPRSS11BQ86T26 416 aa15.37■□□□□ 0.05
MCF2L-232ENST00000535094 ASCC1Q8N9N2 400 aaKnown RBP15.37■□□□□ 0.05
MCF2L-232ENST00000535094 AQP11Q8NBQ7 271 aa15.37■□□□□ 0.05
MCF2L-232ENST00000535094 FCGR1BQ92637 280 aa15.37■□□□□ 0.05
MCF2L-232ENST00000535094 FOXJ1Q92949 421 aa15.37■□□□□ 0.05
MCF2L-232ENST00000535094 PHF21AQ96BD5 680 aa15.37■□□□□ 0.05
MCF2L-232ENST00000535094 COL21A1Q96P44 957 aa15.37■□□□□ 0.05
MCF2L-232ENST00000535094 TRIB3Q96RU7 358 aa15.37■□□□□ 0.05
MCF2L-232ENST00000535094 CTRCQ99895 268 aa15.37■□□□□ 0.05
MCF2L-232ENST00000535094 POLR2J2Q9GZM3 115 aaKnown RBP15.37■□□□□ 0.05
MCF2L-232ENST00000535094 VPS29Q9UBQ0 182 aa15.37■□□□□ 0.05
MCF2L-232ENST00000535094 ISPDA4D126 451 aa15.36■□□□□ 0.05
MCF2L-232ENST00000535094 ANKDD1BA6NHY2 528 aa15.36■□□□□ 0.05
MCF2L-232ENST00000535094 WWP2O00308 870 aa15.36■□□□□ 0.05
MCF2L-232ENST00000535094 PTPN5P54829 565 aa15.36■□□□□ 0.05
MCF2L-232ENST00000535094 KCNA10Q16322 511 aa15.36■□□□□ 0.05
MCF2L-232ENST00000535094 DTX3Q8N9I9 347 aa15.36■□□□□ 0.05
MCF2L-232ENST00000535094 TMEM121BQ9BXQ6 578 aaPredicted RBP15.36■□□□□ 0.05
MCF2L-232ENST00000535094 BRD9Q9H8M2 597 aa15.36■□□□□ 0.05
MCF2L-232ENST00000535094 NUFIP1Q9UHK0 495 aaKnown RBP15.36■□□□□ 0.05
MCF2L-232ENST00000535094 PRKAB1Q9Y478 270 aa15.36■□□□□ 0.05
MCF2L-232ENST00000535094 BRWD3Q6RI45 1802 aa15.36■□□□□ 0.05
MCF2L-232ENST00000535094 OR6C70A6NIJ9 312 aa15.36■□□□□ 0.05
MCF2L-232ENST00000535094 METTL15A6NJ78 407 aa15.36■□□□□ 0.05
MCF2L-232ENST00000535094 DRGXA6NNA5 263 aa15.36■□□□□ 0.05
MCF2L-232ENST00000535094 CLCA1A8K7I4 914 aa15.36■□□□□ 0.05
MCF2L-232ENST00000535094 SPAM1P38567 509 aa15.36■□□□□ 0.05
MCF2L-232ENST00000535094 HNF4AP41235 474 aa15.36■□□□□ 0.05
MCF2L-232ENST00000535094 IL12RB1P42701 662 aa15.36■□□□□ 0.05
MCF2L-232ENST00000535094 HNRNPFP52597 415 aaKnown RBP15.36■□□□□ 0.05
MCF2L-232ENST00000535094 SNRPD2P62316 118 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms