RNA–Protein interactions for RNA: ENST00000534765.1

SF3B2-216, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 3,932 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-216ENST00000534765 TUBA1CQ9BQE3 449 aa8.76□□□□□ -1.01
SF3B2-216ENST00000534765 DPCDQ9BVM2 203 aaPredicted RBP8.76□□□□□ -1.01
SF3B2-216ENST00000534765 BTBD2Q9BX70 525 aa8.76□□□□□ -1.01
SF3B2-216ENST00000534765 PBX4Q9BYU1 374 aa8.76□□□□□ -1.01
SF3B2-216ENST00000534765 NMRAL1Q9HBL8 299 aa8.76□□□□□ -1.01
SF3B2-216ENST00000534765 ZBTB20Q9HC78 741 aaPredicted RBP8.76□□□□□ -1.01
SF3B2-216ENST00000534765 ABCB8Q9NUT2 735 aa8.76□□□□□ -1.01
SF3B2-216ENST00000534765 ING3Q9NXR8 418 aa8.76□□□□□ -1.01
SF3B2-216ENST00000534765 CNOT11Q9UKZ1 510 aaKnown RBP8.76□□□□□ -1.01
SF3B2-216ENST00000534765 ASB1Q9Y576 335 aa8.76□□□□□ -1.01
SF3B2-216ENST00000534765 EFCAB10A6NFE3 127 aa8.76□□□□□ -1.01
SF3B2-216ENST00000534765 FZD6O60353 706 aa8.76□□□□□ -1.01
SF3B2-216ENST00000534765 S100A9P06702 114 aaKnown RBP8.76□□□□□ -1.01
SF3B2-216ENST00000534765 HTR7P34969 479 aa8.76□□□□□ -1.01
SF3B2-216ENST00000534765 EIF2DP41214 584 aaKnown RBP8.76□□□□□ -1.01
SF3B2-216ENST00000534765 ZNF140P52738 457 aaPredicted RBP8.76□□□□□ -1.01
SF3B2-216ENST00000534765 TRAP1Q12931 704 aaKnown RBP8.76□□□□□ -1.01
SF3B2-216ENST00000534765 VPS26BQ4G0F5 336 aa8.76□□□□□ -1.01
SF3B2-216ENST00000534765 GPR158Q5T848 1215 aa8.76□□□□□ -1.01
SF3B2-216ENST00000534765 TTC23Q5W5X9 447 aa8.76□□□□□ -1.01
SF3B2-216ENST00000534765 ZNF600Q6ZNG1 722 aa8.76□□□□□ -1.01
SF3B2-216ENST00000534765 USP7Q93009 1102 aa8.76□□□□□ -1.01
SF3B2-216ENST00000534765 MYO19Q96H55 970 aa8.76□□□□□ -1.01
SF3B2-216ENST00000534765 CPNE1Q99829 537 aa8.76□□□□□ -1.01
SF3B2-216ENST00000534765 DPP7Q9UHL4 492 aa8.76□□□□□ -1.01
SF3B2-216ENST00000534765 RAPGEFL1Q9UHV5 662 aa8.76□□□□□ -1.01
SF3B2-216ENST00000534765 VPS9D1Q9Y2B5 631 aa8.76□□□□□ -1.01
SF3B2-216ENST00000534765 IRAK3Q9Y616 596 aa8.76□□□□□ -1.01
SF3B2-216ENST00000534765 OR5F1O95221 314 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 GEMP55040 296 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 SRP54P61011 504 aaKnown RBP8.75□□□□□ -1.01
SF3B2-216ENST00000534765 RUNX1T1Q06455 604 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 PRKAA1Q13131 559 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 RPA4Q13156 261 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 COL19A1Q14993 1142 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 LAPTM4AQ15012 233 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 ACOX1Q15067 660 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 SLC36A3Q495N2 470 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 CHST14Q8NCH0 376 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 FATE1Q969F0 183 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 NSMCE2Q96MF7 247 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 TRAF4Q9BUZ4 470 aaPredicted RBP8.75□□□□□ -1.01
SF3B2-216ENST00000534765 TMEM106CQ9BVX2 250 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 MAGEH1Q9H213 219 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 USE1Q9NZ43 259 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 EVLQ9UI08 416 aaPredicted RBP8.75□□□□□ -1.01
SF3B2-216ENST00000534765 HCN2Q9UL51 889 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 TTLL8A6PVC2 850 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 ERI2A8K979 691 aaKnown RBP8.75□□□□□ -1.01
SF3B2-216ENST00000534765 UGT2B11O75310 529 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 ANXA9O76027 345 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 GLP2RO95838 553 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 CHRM5P08912 532 aaPredicted RBP8.75□□□□□ -1.01
SF3B2-216ENST00000534765 FCGR1AP12314 374 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 GPC1P35052 558 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 HTR3AP46098 478 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 PTPN5P54829 565 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 SLC7A9P82251 487 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 DEFA5Q01523 94 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 ZNF181Q2M3W8 571 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 GAB4Q2WGN9 574 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 NCEH1Q6PIU2 408 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 HTR3DQ70Z44 454 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 PELI3Q8N2H9 469 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 FSTL5Q8N475 847 aaPredicted RBP8.75□□□□□ -1.01
SF3B2-216ENST00000534765 YIPF7Q8N8F6 280 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 LPCAT1Q8NF37 534 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 OR4K2Q8NGD2 314 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 CYB5D2Q8WUJ1 264 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 SH3KBP1Q96B97 665 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 BOCQ9BWV1 1114 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 FAM126AQ9BYI3 521 aaPredicted RBP8.75□□□□□ -1.01
SF3B2-216ENST00000534765 POLR1EQ9GZS1 481 aaKnown RBP8.75□□□□□ -1.01
SF3B2-216ENST00000534765 RACGAP1Q9H0H5 632 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 CUEDC1Q9NWM3 386 aaPredicted RBP8.75□□□□□ -1.01
SF3B2-216ENST00000534765 KIF17Q9P2E2 1029 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 ZDHHC2Q9UIJ5 367 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 FBXO5Q9UKT4 447 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 RAI2Q9Y5P3 530 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 NUP210Q8TEM1 1887 aaPredicted RBP8.75□□□□□ -1.01
SF3B2-216ENST00000534765 A0A0G2JPF8 293 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 HNRNPCL3B7ZW38 293 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 ACOT8O14734 319 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 CLDN11O75508 207 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 FHP07954 510 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 HNRNPCL4P0DMR1 293 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 BNC1Q01954 994 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 MXD1Q05195 221 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 STARD3Q14849 445 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 UAP1L1Q3KQV9 507 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 POM121L1PQ3SYA9 428 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 TMPRSS9Q7Z410 1059 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 ADIPOR2Q86V24 386 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 HS3ST5Q8IZT8 346 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 LILRB2Q8N423 598 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 HEXDCQ8WVB3 486 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 Q96MT0 163 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 C1QTNF6Q9BXI9 259 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 ALOXE3Q9BYJ1 711 aa8.75□□□□□ -1.01
SF3B2-216ENST00000534765 VPS28Q9UK41 221 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms