RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 ETHE1O95571 254 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 RETP07949 1114 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 ZCCHC18P0CG32 403 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 HRH2P25021 359 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 RPL10P27635 214 aaKnown RBP12.88□□□□□ -0.35
BEST1-208ENST00000534553 PTPN6P29350 595 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 OR4D2P58180 307 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 PHC1P78364 1004 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 RAE1P78406 368 aaKnown RBP12.88□□□□□ -0.35
BEST1-208ENST00000534553 ABATP80404 500 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 OR4F3Q6IEY1 312 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 ERICH5Q6P6B1 374 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 KIAA1324Q6UXG2 1013 aaKnown RBP12.88□□□□□ -0.35
BEST1-208ENST00000534553 WASH2PQ6VEQ5 465 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 PAGE2Q7Z2X7 111 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 COMMD6Q7Z4G1 85 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 CALHM3Q86XJ0 350 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 DTWD1Q8N5C7 304 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 OR4K1Q8NGD4 311 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 OR2L8Q8NGY9 312 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 OR10A6Q8NH74 314 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 FAM3CQ92520 227 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 SNX19Q92543 992 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 GATA6Q92908 595 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 COQ8BQ96D53 544 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 FAM120BQ96EK7 910 aaKnown RBP12.88□□□□□ -0.35
BEST1-208ENST00000534553 QRFPRQ96P65 431 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 IL17FQ96PD4 163 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 PHF12Q96QT6 1004 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 INSM2Q96T92 566 aaPredicted RBP12.88□□□□□ -0.35
BEST1-208ENST00000534553 C9orf16Q9BUW7 83 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 PHF7Q9BWX1 381 aaPredicted RBP12.88□□□□□ -0.35
BEST1-208ENST00000534553 PRO3102Q9H379 93 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 RPF2Q9H7B2 306 aaKnown RBP12.88□□□□□ -0.35
BEST1-208ENST00000534553 POLMQ9NP87 494 aaPredicted RBP12.88□□□□□ -0.35
BEST1-208ENST00000534553 MYNNQ9NPC7 610 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 SLC2A4RGQ9NR83 387 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 GMPR2Q9P2T1 348 aaKnown RBP12.88□□□□□ -0.35
BEST1-208ENST00000534553 TAC3Q9UHF0 121 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 ATP6V1HQ9UI12 483 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 GPSM3Q9Y4H4 160 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 AP1M2Q9Y6Q5 423 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 A0A1W2PPC1 479 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 PDZK1P1A8MUH7 402 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 RNASET2O00584 256 aaKnown RBP12.88□□□□□ -0.35
BEST1-208ENST00000534553 SLC31A1O15431 190 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 LRATO95237 230 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 CCNDBP1O95273 360 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 RAP2AP10114 183 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 MTHFD1P11586 935 aaKnown RBP12.88□□□□□ -0.35
BEST1-208ENST00000534553 ZNF26P17031 533 aaPredicted RBP12.88□□□□□ -0.35
BEST1-208ENST00000534553 NDUFV2P19404 249 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 IGFBP4P22692 258 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 PKLRP30613 574 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 MAT2AP31153 395 aaKnown RBP12.88□□□□□ -0.35
BEST1-208ENST00000534553 PPP2CBP62714 309 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 PPP2CAP67775 309 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 REEP5Q00765 189 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 SELPLGQ14242 412 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 MICU2Q8IYU8 434 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 RNF175Q8N4F7 328 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 BIRC7Q96CA5 298 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 ZNF597Q96LX8 424 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 WDR92Q96MX6 357 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 CAMK1GQ96NX5 476 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 TRIM8Q9BZR9 551 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 SLC6A17Q9H1V8 727 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 REEP4Q9H6H4 257 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 IMP3Q9NV31 184 aaKnown RBP12.88□□□□□ -0.35
BEST1-208ENST00000534553 ZNF282Q9UDV7 671 aaPredicted RBP12.88□□□□□ -0.35
BEST1-208ENST00000534553 LIMD1Q9UGP4 676 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 SH2B3Q9UQQ2 575 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 PCDHB11Q9Y5F2 797 aa12.88□□□□□ -0.35
BEST1-208ENST00000534553 TCRBV21S2A2A0A5A6 115 aa12.87□□□□□ -0.35
BEST1-208ENST00000534553 H3BQ06 376 aaPredicted RBP12.87□□□□□ -0.35
BEST1-208ENST00000534553 MBTPS2O43462 519 aa12.87□□□□□ -0.35
BEST1-208ENST00000534553 SCN2BO60939 215 aa12.87□□□□□ -0.35
BEST1-208ENST00000534553 TIPRLO75663 272 aa12.87□□□□□ -0.35
BEST1-208ENST00000534553 FUCA1P04066 466 aa12.87□□□□□ -0.35
BEST1-208ENST00000534553 AKT2P31751 481 aa12.87□□□□□ -0.35
BEST1-208ENST00000534553 NUDT1P36639 197 aa12.87□□□□□ -0.35
BEST1-208ENST00000534553 TPMTP51580 245 aa12.87□□□□□ -0.35
BEST1-208ENST00000534553 PLIN5Q00G26 463 aa12.87□□□□□ -0.35
BEST1-208ENST00000534553 FOLH1Q04609 750 aa12.87□□□□□ -0.35
BEST1-208ENST00000534553 TMTC4Q5T4D3 741 aa12.87□□□□□ -0.35
BEST1-208ENST00000534553 PPP4R4Q6NUP7 873 aa12.87□□□□□ -0.35
BEST1-208ENST00000534553 DNAJC14Q6Y2X3 702 aaPredicted RBP12.87□□□□□ -0.35
BEST1-208ENST00000534553 EID3Q8N140 333 aa12.87□□□□□ -0.35
BEST1-208ENST00000534553 MARVELD2Q8N4S9 558 aa12.87□□□□□ -0.35
BEST1-208ENST00000534553 TBC1D19Q8N5T2 526 aa12.87□□□□□ -0.35
BEST1-208ENST00000534553 GPR156Q8NFN8 814 aa12.87□□□□□ -0.35
BEST1-208ENST00000534553 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.87□□□□□ -0.35
BEST1-208ENST00000534553 GAS2L1Q99501 681 aaPredicted RBP12.87□□□□□ -0.35
BEST1-208ENST00000534553 BDH2Q9BUT1 245 aa12.87□□□□□ -0.35
BEST1-208ENST00000534553 OSBPL11Q9BXB4 747 aa12.87□□□□□ -0.35
BEST1-208ENST00000534553 KIR3DX1Q9H7L2 352 aa12.87□□□□□ -0.35
BEST1-208ENST00000534553 CARS2Q9HA77 564 aaKnown RBP12.87□□□□□ -0.35
BEST1-208ENST00000534553 OLAHQ9NV23 265 aa12.87□□□□□ -0.35
BEST1-208ENST00000534553 MOSPD1Q9UJG1 213 aa12.87□□□□□ -0.35
BEST1-208ENST00000534553 PLAGL1Q9UM63 463 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms