RNA–Protein interactions for RNA: ENST00000534406.1

SIPA1-210, Transcript of signal-induced proliferation-associated 1, humanhuman

TSL 3

Gene SIPA1, Length 351 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1-210ENST00000534406 KRT78Q8N1N4 520 aa23.09■■□□□ 1.29
SIPA1-210ENST00000534406 ZNF740Q8NDX6 193 aa23.09■■□□□ 1.29
SIPA1-210ENST00000534406 SMC6Q96SB8 1091 aa23.09■■□□□ 1.29
SIPA1-210ENST00000534406 LHX9Q9NQ69 397 aa23.09■■□□□ 1.29
SIPA1-210ENST00000534406 CUTCQ9NTM9 273 aa23.09■■□□□ 1.29
SIPA1-210ENST00000534406 GEMIN8Q9NWZ8 242 aaKnown RBP23.09■■□□□ 1.29
SIPA1-210ENST00000534406 A0A087WV48 116 aa23.08■■□□□ 1.29
SIPA1-210ENST00000534406 MEN1O00255 615 aa23.08■■□□□ 1.29
SIPA1-210ENST00000534406 E2F3O00716 465 aa23.08■■□□□ 1.29
SIPA1-210ENST00000534406 P2RX6O15547 441 aa23.08■■□□□ 1.29
SIPA1-210ENST00000534406 KATNA1O75449 491 aa23.08■■□□□ 1.29
SIPA1-210ENST00000534406 PROCP04070 461 aa23.08■■□□□ 1.29
SIPA1-210ENST00000534406 KLK3P07288 261 aaPredicted RBP23.08■■□□□ 1.29
SIPA1-210ENST00000534406 SCTRP47872 440 aa23.08■■□□□ 1.29
SIPA1-210ENST00000534406 GTF2H2Q13888 395 aa23.08■■□□□ 1.29
SIPA1-210ENST00000534406 HKDC1Q2TB90 917 aa23.08■■□□□ 1.29
SIPA1-210ENST00000534406 FAM214AQ32MH5 1076 aa23.08■■□□□ 1.29
SIPA1-210ENST00000534406 GTF2H2CQ6P1K8 395 aa23.08■■□□□ 1.29
SIPA1-210ENST00000534406 GOLGA7Q7Z5G4 137 aa23.08■■□□□ 1.29
SIPA1-210ENST00000534406 ASPGQ86U10 573 aa23.08■■□□□ 1.29
SIPA1-210ENST00000534406 MR1Q95460 341 aa23.08■■□□□ 1.29
SIPA1-210ENST00000534406 WDR34Q96EX3 536 aa23.08■■□□□ 1.29
SIPA1-210ENST00000534406 PTCD3Q96EY7 689 aaKnown RBP23.08■■□□□ 1.29
SIPA1-210ENST00000534406 RUFY1Q96T51 708 aa23.08■■□□□ 1.29
SIPA1-210ENST00000534406 EFCAB11Q9BUY7 163 aa23.08■■□□□ 1.29
SIPA1-210ENST00000534406 PITHD1Q9GZP4 211 aaPredicted RBP23.08■■□□□ 1.29
SIPA1-210ENST00000534406 CENPHQ9H3R5 247 aa23.08■■□□□ 1.29
SIPA1-210ENST00000534406 DHCR7Q9UBM7 475 aaKnown RBP23.08■■□□□ 1.29
SIPA1-210ENST00000534406 PCTPQ9UKL6 214 aa23.08■■□□□ 1.29
SIPA1-210ENST00000534406 PADI1Q9ULC6 663 aa23.08■■□□□ 1.29
SIPA1-210ENST00000534406 RUVBL1Q9Y265 456 aaKnown RBP23.08■■□□□ 1.29
SIPA1-210ENST00000534406 USP24Q9UPU5 2620 aa23.08■■□□□ 1.28
SIPA1-210ENST00000534406 A0A1B0GX78 115 aa23.07■■□□□ 1.28
SIPA1-210ENST00000534406 HYKKA2RU49 373 aa23.07■■□□□ 1.28
SIPA1-210ENST00000534406 LCMT2O60294 686 aaKnown RBP23.07■■□□□ 1.28
SIPA1-210ENST00000534406 PLIN3O60664 434 aa23.07■■□□□ 1.28
SIPA1-210ENST00000534406 PRAMEF4O60810 478 aa23.07■■□□□ 1.28
SIPA1-210ENST00000534406 RPS17P08708 135 aaKnown RBP23.07■■□□□ 1.28
SIPA1-210ENST00000534406 EMP3P54852 163 aa23.07■■□□□ 1.28
SIPA1-210ENST00000534406 CHIT1Q13231 466 aa23.07■■□□□ 1.28
SIPA1-210ENST00000534406 DOC2AQ14183 400 aa23.07■■□□□ 1.28
SIPA1-210ENST00000534406 CASP8Q14790 479 aa23.07■■□□□ 1.28
SIPA1-210ENST00000534406 RBBP5Q15291 538 aaKnown RBP23.07■■□□□ 1.28
SIPA1-210ENST00000534406 TBCCQ15814 346 aa23.07■■□□□ 1.28
SIPA1-210ENST00000534406 ST3GAL2Q16842 350 aa23.07■■□□□ 1.28
SIPA1-210ENST00000534406 MUM1Q2TAK8 710 aa23.07■■□□□ 1.28
SIPA1-210ENST00000534406 PAGE2BQ5JRK9 111 aa23.07■■□□□ 1.28
SIPA1-210ENST00000534406 MANEAQ5SRI9 462 aa23.07■■□□□ 1.28
SIPA1-210ENST00000534406 PRAMEF9Q5VWM5 478 aa23.07■■□□□ 1.28
SIPA1-210ENST00000534406 TTLL10Q6ZVT0 673 aa23.07■■□□□ 1.28
SIPA1-210ENST00000534406 VASH2Q86V25 355 aa23.07■■□□□ 1.28
SIPA1-210ENST00000534406 SLC22A9Q8IVM8 553 aa23.07■■□□□ 1.28
SIPA1-210ENST00000534406 BANPQ8N9N5 519 aa23.07■■□□□ 1.28
SIPA1-210ENST00000534406 CAMKVQ8NCB2 501 aa23.07■■□□□ 1.28
SIPA1-210ENST00000534406 KIAA1143Q96AT1 154 aaPredicted RBP23.07■■□□□ 1.28
SIPA1-210ENST00000534406 C10orf90Q96M02 699 aa23.07■■□□□ 1.28
SIPA1-210ENST00000534406 DPH2Q9BQC3 489 aaPredicted RBP23.07■■□□□ 1.28
SIPA1-210ENST00000534406 NDOR1Q9UHB4 597 aa23.07■■□□□ 1.28
SIPA1-210ENST00000534406 MID2Q9UJV3 735 aa23.07■■□□□ 1.28
SIPA1-210ENST00000534406 DSCR3O14972 297 aa23.06■■□□□ 1.28
SIPA1-210ENST00000534406 DLX3O60479 287 aa23.06■■□□□ 1.28
SIPA1-210ENST00000534406 STATHP02808 62 aa23.06■■□□□ 1.28
SIPA1-210ENST00000534406 SLC35G6P0C7Q6 338 aa23.06■■□□□ 1.28
SIPA1-210ENST00000534406 MYL2P10916 166 aa23.06■■□□□ 1.28
SIPA1-210ENST00000534406 H2AFXP16104 143 aaPredicted RBP23.06■■□□□ 1.28
SIPA1-210ENST00000534406 AHRP35869 848 aa23.06■■□□□ 1.28
SIPA1-210ENST00000534406 HERVK_113P63132 956 aa23.06■■□□□ 1.28
SIPA1-210ENST00000534406 PCDH1Q08174 1060 aa23.06■■□□□ 1.28
SIPA1-210ENST00000534406 LAPTM5Q13571 262 aa23.06■■□□□ 1.28
SIPA1-210ENST00000534406 C1orf189Q5VU69 101 aa23.06■■□□□ 1.28
SIPA1-210ENST00000534406 GARNL3Q5VVW2 1013 aa23.06■■□□□ 1.28
SIPA1-210ENST00000534406 BROXQ5VW32 411 aa23.06■■□□□ 1.28
SIPA1-210ENST00000534406 ZNF385CQ66K41 422 aaPredicted RBP23.06■■□□□ 1.28
SIPA1-210ENST00000534406 TMIGD1Q6UXZ0 262 aa23.06■■□□□ 1.28
SIPA1-210ENST00000534406 ZYG11AQ6WRX3 759 aa23.06■■□□□ 1.28
SIPA1-210ENST00000534406 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP23.06■■□□□ 1.28
SIPA1-210ENST00000534406 CCDC63Q8NA47 563 aa23.06■■□□□ 1.28
SIPA1-210ENST00000534406 TTLQ8NG68 377 aa23.06■■□□□ 1.28
SIPA1-210ENST00000534406 RDH11Q8TC12 318 aa23.06■■□□□ 1.28
SIPA1-210ENST00000534406 SLC13A3Q8WWT9 602 aa23.06■■□□□ 1.28
SIPA1-210ENST00000534406 GBP5Q96PP8 586 aa23.06■■□□□ 1.28
SIPA1-210ENST00000534406 ERVK-6Q9BXR3 956 aa23.06■■□□□ 1.28
SIPA1-210ENST00000534406 ZFP69BQ9UJL9 534 aa23.06■■□□□ 1.28
SIPA1-210ENST00000534406 CROTQ9UKG9 612 aa23.06■■□□□ 1.28
SIPA1-210ENST00000534406 SRRM3A6NNA2 597 aaPredicted RBP23.05■■□□□ 1.28
SIPA1-210ENST00000534406 NDUFS4O43181 175 aa23.05■■□□□ 1.28
SIPA1-210ENST00000534406 MYZAPP0CAP1 466 aa23.05■■□□□ 1.28
SIPA1-210ENST00000534406 AGXTP21549 392 aa23.05■■□□□ 1.28
SIPA1-210ENST00000534406 GSTM2P28161 218 aa23.05■■□□□ 1.28
SIPA1-210ENST00000534406 CASP2P42575 452 aa23.05■■□□□ 1.28
SIPA1-210ENST00000534406 TLE3Q04726 772 aa23.05■■□□□ 1.28
SIPA1-210ENST00000534406 COL9A2Q14055 689 aaPredicted RBP23.05■■□□□ 1.28
SIPA1-210ENST00000534406 E2F2Q14209 437 aa23.05■■□□□ 1.28
SIPA1-210ENST00000534406 NDUFA9Q16795 377 aa23.05■■□□□ 1.28
SIPA1-210ENST00000534406 ZNF517Q6ZMY9 492 aaPredicted RBP23.05■■□□□ 1.28
SIPA1-210ENST00000534406 ANKRD53Q8N9V6 530 aa23.05■■□□□ 1.28
SIPA1-210ENST00000534406 TM4SF19Q96DZ7 209 aa23.05■■□□□ 1.28
SIPA1-210ENST00000534406 CCDC126Q96EE4 140 aa23.05■■□□□ 1.28
SIPA1-210ENST00000534406 PGM2Q96G03 612 aa23.05■■□□□ 1.28
SIPA1-210ENST00000534406 C1QTNF3Q9BXJ4 246 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms