RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	G6PD	P11413	515 aa		4.4	□□□□□ -1.71
ATM-223	ENST00000533979	NR1D1	P20393	614 aa		4.4	□□□□□ -1.71
ATM-223	ENST00000533979	MAGEB1	P43366	347 aa		4.4	□□□□□ -1.71
ATM-223	ENST00000533979	LHX1	P48742	406 aa		4.4	□□□□□ -1.71
ATM-223	ENST00000533979	LBX1	P52954	281 aa		4.4	□□□□□ -1.71
ATM-223	ENST00000533979	MFAP3	P55082	362 aa		4.4	□□□□□ -1.71
ATM-223	ENST00000533979	SRP54	P61011	504 aa	Known RBP	4.4	□□□□□ -1.71
ATM-223	ENST00000533979	DLK1	P80370	383 aa		4.4	□□□□□ -1.71
ATM-223	ENST00000533979	GALK2	Q01415	458 aa		4.4	□□□□□ -1.71
ATM-223	ENST00000533979	RUNX1T1	Q06455	604 aa		4.4	□□□□□ -1.71
ATM-223	ENST00000533979	RIPK1	Q13546	671 aa		4.4	□□□□□ -1.71
ATM-223	ENST00000533979	RAPSN	Q13702	412 aa		4.4	□□□□□ -1.71
ATM-223	ENST00000533979	HSP90B2P	Q58FF3	399 aa		4.4	□□□□□ -1.71
ATM-223	ENST00000533979	ALS2CL	Q60I27	953 aa		4.4	□□□□□ -1.71
ATM-223	ENST00000533979	KLHL10	Q6JEL2	608 aa		4.4	□□□□□ -1.71
ATM-223	ENST00000533979	PHLDB2	Q86SQ0	1253 aa		4.4	□□□□□ -1.71
ATM-223	ENST00000533979	KLHDC8A	Q8IYD2	350 aa		4.4	□□□□□ -1.71
ATM-223	ENST00000533979	ZNF611	Q8N823	705 aa		4.4	□□□□□ -1.71
ATM-223	ENST00000533979	TMEM185A	Q8NFB2	350 aa		4.4	□□□□□ -1.71
ATM-223	ENST00000533979	OR52K2	Q8NGK3	314 aa		4.4	□□□□□ -1.71
ATM-223	ENST00000533979	OR2AJ1	Q8NGZ0	328 aa		4.4	□□□□□ -1.71
ATM-223	ENST00000533979	GPT2	Q8TD30	523 aa		4.4	□□□□□ -1.71
ATM-223	ENST00000533979	RNF139	Q8WU17	664 aa		4.4	□□□□□ -1.71
ATM-223	ENST00000533979	ARHGAP45	Q92619	1136 aa		4.4	□□□□□ -1.71
ATM-223	ENST00000533979	ERGIC1	Q969X5	290 aa		4.4	□□□□□ -1.71
ATM-223	ENST00000533979	SFXN2	Q96NB2	322 aa		4.4	□□□□□ -1.71
ATM-223	ENST00000533979	SLC22A12	Q96S37	553 aa		4.4	□□□□□ -1.71
ATM-223	ENST00000533979	C16orf70	Q9BSU1	422 aa		4.4	□□□□□ -1.71
ATM-223	ENST00000533979	CARD6	Q9BX69	1037 aa		4.4	□□□□□ -1.71
ATM-223	ENST00000533979	RAB17	Q9H0T7	212 aa		4.4	□□□□□ -1.71
ATM-223	ENST00000533979	DPAGT1	Q9H3H5	408 aa		4.4	□□□□□ -1.71
ATM-223	ENST00000533979	ECT2	Q9H8V3	914 aa		4.4	□□□□□ -1.71
ATM-223	ENST00000533979	RPF1	Q9H9Y2	349 aa	Known RBP	4.4	□□□□□ -1.71
ATM-223	ENST00000533979	CLK4	Q9HAZ1	481 aa	Known RBP	4.4	□□□□□ -1.71
ATM-223	ENST00000533979	PPAN	Q9NQ55	473 aa	Known RBP	4.4	□□□□□ -1.71
ATM-223	ENST00000533979	TXLNG	Q9NUQ3	528 aa		4.4	□□□□□ -1.71
ATM-223	ENST00000533979	TMEM51	Q9NW97	253 aa		4.4	□□□□□ -1.71
ATM-223	ENST00000533979	OCIAD1	Q9NX40	245 aa		4.4	□□□□□ -1.71
ATM-223	ENST00000533979	TMOD3	Q9NYL9	352 aa		4.4	□□□□□ -1.71
ATM-223	ENST00000533979	UBQLN2	Q9UHD9	624 aa		4.4	□□□□□ -1.71
ATM-223	ENST00000533979	KCNG2	Q9UJ96	466 aa		4.4	□□□□□ -1.71
ATM-223	ENST00000533979	ABT1	Q9ULW3	272 aa	Known RBP	4.4	□□□□□ -1.71
ATM-223	ENST00000533979	NUDC	Q9Y266	331 aa		4.4	□□□□□ -1.71
ATM-223	ENST00000533979	EXOC6B	Q9Y2D4	811 aa		4.4	□□□□□ -1.71
ATM-223	ENST00000533979	PADI2	Q9Y2J8	665 aa		4.4	□□□□□ -1.71
ATM-223	ENST00000533979	ASB3	Q9Y575	518 aa		4.4	□□□□□ -1.71
ATM-223	ENST00000533979	UBE4B	O95155	1302 aa		4.4	□□□□□ -1.71
ATM-223	ENST00000533979	ADGRB2	O60241	1585 aa		4.4	□□□□□ -1.71
ATM-223	ENST00000533979	ANKRD30A	Q9BXX3	1397 aa		4.4	□□□□□ -1.71
ATM-223	ENST00000533979	DISP2	A7MBM2	1401 aa		4.39	□□□□□ -1.71
ATM-223	ENST00000533979	ERVK-7	P63135	1459 aa		4.39	□□□□□ -1.71
ATM-223	ENST00000533979	RGPD1	P0DJD0	1748 aa		4.39	□□□□□ -1.71
ATM-223	ENST00000533979	MEIS2	O14770	477 aa		4.39	□□□□□ -1.71
ATM-223	ENST00000533979	T	O15178	435 aa		4.39	□□□□□ -1.71
ATM-223	ENST00000533979	CLDN3	O15551	220 aa		4.39	□□□□□ -1.71
ATM-223	ENST00000533979	XRCC3	O43542	346 aa		4.39	□□□□□ -1.71
ATM-223	ENST00000533979	GMFG	O60234	142 aa		4.39	□□□□□ -1.71
ATM-223	ENST00000533979	OR10H2	O60403	315 aa		4.39	□□□□□ -1.71
ATM-223	ENST00000533979	ATP9A	O75110	1047 aa		4.39	□□□□□ -1.71
ATM-223	ENST00000533979	KRT8	P05787	483 aa		4.39	□□□□□ -1.71
ATM-223	ENST00000533979	CSN3	P07498	182 aa		4.39	□□□□□ -1.71
ATM-223	ENST00000533979	OR2T7	P0C7T2	308 aa		4.39	□□□□□ -1.71
ATM-223	ENST00000533979	CD58	P19256	250 aa		4.39	□□□□□ -1.71
ATM-223	ENST00000533979	FUT1	P19526	365 aa		4.39	□□□□□ -1.71
ATM-223	ENST00000533979	HRH2	P25021	359 aa		4.39	□□□□□ -1.71
ATM-223	ENST00000533979	MPZ	P25189	248 aa		4.39	□□□□□ -1.71
ATM-223	ENST00000533979	C21orf33	P30042	268 aa	Predicted RBP	4.39	□□□□□ -1.71
ATM-223	ENST00000533979	IER3	P46695	156 aa		4.39	□□□□□ -1.71
ATM-223	ENST00000533979	PEX5	P50542	639 aa		4.39	□□□□□ -1.71
ATM-223	ENST00000533979	SMS	P52788	366 aa		4.39	□□□□□ -1.71
ATM-223	ENST00000533979	KRTAP10-7	P60409	375 aa	Predicted RBP	4.39	□□□□□ -1.71
ATM-223	ENST00000533979	ARHGAP1	Q07960	439 aa		4.39	□□□□□ -1.71
ATM-223	ENST00000533979	GPM6B	Q13491	265 aa		4.39	□□□□□ -1.71
ATM-223	ENST00000533979	TSTA3	Q13630	321 aa	Predicted RBP	4.39	□□□□□ -1.71
ATM-223	ENST00000533979	LRRC38	Q5VT99	294 aa		4.39	□□□□□ -1.71
ATM-223	ENST00000533979	ZDHHC20	Q5W0Z9	365 aa		4.39	□□□□□ -1.71
ATM-223	ENST00000533979	WBP2NL	Q6ICG8	309 aa		4.39	□□□□□ -1.71
ATM-223	ENST00000533979	LCN10	Q6JVE6	187 aa		4.39	□□□□□ -1.71
ATM-223	ENST00000533979	SLC36A4	Q6YBV0	504 aa		4.39	□□□□□ -1.71
ATM-223	ENST00000533979	LIN28B	Q6ZN17	250 aa	Known RBP eCLIP	4.39	□□□□□ -1.71
ATM-223	ENST00000533979	MACC1	Q6ZN28	852 aa		4.39	□□□□□ -1.71
ATM-223	ENST00000533979	NRARP	Q7Z6K4	114 aa		4.39	□□□□□ -1.71
ATM-223	ENST00000533979	TAF8	Q7Z7C8	310 aa		4.39	□□□□□ -1.71
ATM-223	ENST00000533979	GPR180	Q86V85	440 aa		4.39	□□□□□ -1.71
ATM-223	ENST00000533979	NR2C2AP	Q86WQ0	139 aa		4.39	□□□□□ -1.71
ATM-223	ENST00000533979	FAM133A	Q8N9E0	248 aa		4.39	□□□□□ -1.71
ATM-223	ENST00000533979	OR52M1	Q8NGK5	317 aa		4.39	□□□□□ -1.71
ATM-223	ENST00000533979	TRIB2	Q92519	343 aa		4.39	□□□□□ -1.71
ATM-223	ENST00000533979	APBB2	Q92870	758 aa		4.39	□□□□□ -1.71
ATM-223	ENST00000533979	TUBGCP3	Q96CW5	907 aa		4.39	□□□□□ -1.71
ATM-223	ENST00000533979	CDKN2AIPNL	Q96HQ2	116 aa		4.39	□□□□□ -1.71
ATM-223	ENST00000533979	PRMT6	Q96LA8	375 aa	Predicted RBP	4.39	□□□□□ -1.71
ATM-223	ENST00000533979	ATG101	Q9BSB4	218 aa		4.39	□□□□□ -1.71
ATM-223	ENST00000533979	DDX47	Q9H0S4	455 aa	Known RBP	4.39	□□□□□ -1.71
ATM-223	ENST00000533979	KCNN2	Q9H2S1	579 aa		4.39	□□□□□ -1.71
ATM-223	ENST00000533979	TFB2M	Q9H5Q4	396 aa	Known RBP	4.39	□□□□□ -1.71
ATM-223	ENST00000533979	YY1AP1	Q9H869	796 aa		4.39	□□□□□ -1.71
ATM-223	ENST00000533979	SEBOX	Q9HB31	216 aa	Predicted RBP	4.39	□□□□□ -1.71
ATM-223	ENST00000533979	TM9SF3	Q9HD45	589 aa		4.39	□□□□□ -1.71
ATM-223	ENST00000533979	KCNMB3	Q9NPA1	279 aa		4.39	□□□□□ -1.71

Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms