RNA–Protein interactions for RNA: ENST00000533728.1

CHKA-207, Transcript of choline kinase alpha, humanhuman

TSL 2

Gene CHKA, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-207ENST00000533728 C11orf24Q96F05 449 aaPredicted RBP9.34□□□□□ -0.91
CHKA-207ENST00000533728 REXO5Q96IC2 774 aaKnown RBP9.34□□□□□ -0.91
CHKA-207ENST00000533728 CNBD2Q96M20 576 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 ASB16Q96NS5 453 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 LRRC3BQ96PB8 259 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 PHF12Q96QT6 1004 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 CIB1Q99828 191 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 ADI1Q9BV57 179 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 TMEM245Q9H330 911 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 KAT8Q9H7Z6 458 aaKnown RBP9.34□□□□□ -0.91
CHKA-207ENST00000533728 TRIM39Q9HCM9 518 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 SERHLQ9NQF3 203 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 PRMT8Q9NR22 394 aaPredicted RBP9.34□□□□□ -0.91
CHKA-207ENST00000533728 THG1LQ9NWX6 298 aaKnown RBP9.34□□□□□ -0.91
CHKA-207ENST00000533728 GMPR2Q9P2T1 348 aaKnown RBP9.34□□□□□ -0.91
CHKA-207ENST00000533728 VPS29Q9UBQ0 182 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.34□□□□□ -0.91
CHKA-207ENST00000533728 CD84Q9UIB8 345 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 SUFUQ9UMX1 484 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 MYRFQ9Y2G1 1151 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 DNMT3AQ9Y6K1 912 aaPredicted RBP9.34□□□□□ -0.91
CHKA-207ENST00000533728 COMMD3-BMI1R4GMX3 469 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 LRBAP50851 2863 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 UTP20O75691 2785 aaKnown RBP9.34□□□□□ -0.91
CHKA-207ENST00000533728 MGAQ8IWI9 3026 aa9.34□□□□□ -0.91
CHKA-207ENST00000533728 NUP214P35658 2090 aaPredicted RBP9.33□□□□□ -0.92
CHKA-207ENST00000533728 GPR89AB7ZAQ6 455 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 FOXE1O00358 373 aaPredicted RBP9.33□□□□□ -0.92
CHKA-207ENST00000533728 KPNA3O00505 521 aaPredicted RBP9.33□□□□□ -0.92
CHKA-207ENST00000533728 DLGAP1O14490 977 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 GSTA4O15217 222 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 CLOCKO15516 846 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 SPINT1O43278 529 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 TSPAN6O43657 245 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 PRAMEF4O60810 478 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 TFAP2AP05549 437 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 GPR89BP0CG08 455 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 MTHFD1P11586 935 aaKnown RBP9.33□□□□□ -0.92
CHKA-207ENST00000533728 CKMT2P17540 419 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 PAX7P23759 505 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 PTPN6P29350 595 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 HSD17B2P37059 387 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 RPL3P39023 403 aaKnown RBP9.33□□□□□ -0.92
CHKA-207ENST00000533728 KIR3DL1P43629 444 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 CTSCP53634 463 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 STARD6P59095 220 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 YBX1P67809 324 aaKnown RBP9.33□□□□□ -0.92
CHKA-207ENST00000533728 MERTKQ12866 999 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 AGERQ15109 404 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 NRF1Q16656 503 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 SLC36A3Q495N2 470 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 SPIN4Q56A73 249 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.33□□□□□ -0.92
CHKA-207ENST00000533728 PRAMEF9Q5VWM5 478 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 KRT80Q6KB66 452 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 CAPN13Q6MZZ7 669 aaPredicted RBP9.33□□□□□ -0.92
CHKA-207ENST00000533728 GALNT18Q6P9A2 607 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 TMEM220Q6QAJ8 160 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 ERN2Q76MJ5 926 aaKnown RBP9.33□□□□□ -0.92
CHKA-207ENST00000533728 SERPINA11Q86U17 422 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 GPR180Q86V85 440 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 NPAS3Q8IXF0 933 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 MSRB3Q8IXL7 192 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 CPA6Q8N4T0 437 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 CBR4Q8N4T8 237 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 DHRSXQ8N5I4 330 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 PHC3Q8NDX5 983 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 SETD7Q8WTS6 366 aaKnown RBP9.33□□□□□ -0.92
CHKA-207ENST00000533728 SKA2Q8WVK7 121 aaPredicted RBP9.33□□□□□ -0.92
CHKA-207ENST00000533728 SORCS1Q8WY21 1168 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 UBE2E3Q969T4 207 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 ARRDC3Q96B67 414 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 RSPRY1Q96DX4 576 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 NUS1Q96E22 293 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 CRELD1Q96HD1 420 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 SHDQ96IW2 340 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 HBEGFQ99075 208 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 EFCAB11Q9BUY7 163 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 CHID1Q9BWS9 393 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 SGPP1Q9BX95 441 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 ZFP14Q9HCL3 533 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 SMPD3Q9NY59 655 aaPredicted RBP9.33□□□□□ -0.92
CHKA-207ENST00000533728 SLC25A37Q9NYZ2 338 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 USE1Q9NZ43 259 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 DNAJB9Q9UBS3 223 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 ZNHIT2Q9UHR6 403 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 MBD1Q9UIS9 605 aaPredicted RBP9.33□□□□□ -0.92
CHKA-207ENST00000533728 CORO2BQ9UQ03 480 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 DLGAP4Q9Y2H0 992 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 RAXQ9Y2V3 346 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 KCNE2Q9Y6J6 123 aa9.33□□□□□ -0.92
CHKA-207ENST00000533728 RNF103-CHMP3A0A140T963 221 aa9.32□□□□□ -0.92
CHKA-207ENST00000533728 ARHGAP10A1A4S6 786 aa9.32□□□□□ -0.92
CHKA-207ENST00000533728 SAC3D1A6NKF1 404 aa9.32□□□□□ -0.92
CHKA-207ENST00000533728 OR2AG2A6NM03 316 aa9.32□□□□□ -0.92
CHKA-207ENST00000533728 EVPLLA8MZ36 301 aa9.32□□□□□ -0.92
CHKA-207ENST00000533728 ANHXE9PGG2 379 aa9.32□□□□□ -0.92
CHKA-207ENST00000533728 H3BM21 787 aa9.32□□□□□ -0.92
CHKA-207ENST00000533728 CXCR6O00574 342 aa9.32□□□□□ -0.92
CHKA-207ENST00000533728 DPM1O60762 260 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms