RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 NPAS3Q8IXF0 933 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 PNLDC1Q8NA58 520 aaKnown RBP6.81□□□□□ -1.32
CTNND1-236ENST00000533667 DCAF4L2Q8NA75 395 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 LSM14AQ8ND56 463 aaKnown RBP6.81□□□□□ -1.32
CTNND1-236ENST00000533667 KAT2AQ92830 837 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 ZNF382Q96SR6 550 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 SERINC1Q9NRX5 453 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 GALPQ9UBC7 116 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 ERVK-11Q9UQG0 969 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 EXOSC1Q9Y3B2 195 aaKnown RBP6.81□□□□□ -1.32
CTNND1-236ENST00000533667 ZNF451Q9Y4E5 1061 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 A0A1W2PRQ8 180 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 TOR1BO14657 336 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 NRP1O14786 923 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 KAT7O95251 611 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 DLDP09622 509 aaKnown RBP6.81□□□□□ -1.32
CTNND1-236ENST00000533667 MAP3K8P41279 467 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 OR3A3P47888 321 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 OR3A2P47893 321 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 TXNL4AP83876 142 aaKnown RBP6.81□□□□□ -1.32
CTNND1-236ENST00000533667 OGDHQ02218 1023 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 GANABQ14697 944 aaKnown RBP6.81□□□□□ -1.32
CTNND1-236ENST00000533667 COL19A1Q14993 1142 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 PDGFRLQ15198 375 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 CHRNA6Q15825 494 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 PPP2R2DQ66LE6 453 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 ATG9BQ674R7 924 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 SLC39A4Q6P5W5 647 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 PRSS55Q6UWB4 352 aaPredicted RBP6.81□□□□□ -1.32
CTNND1-236ENST00000533667 MARCH9Q86YJ5 346 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 PQLC3Q8N755 202 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 ZNF676Q8N7Q3 588 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 SH3RF2Q8TEC5 729 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 DDX1Q92499 740 aaKnown RBP6.81□□□□□ -1.32
CTNND1-236ENST00000533667 RPL10LQ96L21 214 aaKnown RBP6.81□□□□□ -1.32
CTNND1-236ENST00000533667 KXD1Q9BQD3 176 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 RIOK2Q9BVS4 552 aaKnown RBP6.81□□□□□ -1.32
CTNND1-236ENST00000533667 TPT1P8Q9HAU6 139 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 NKX1-2Q9UD57 310 aaPredicted RBP6.81□□□□□ -1.32
CTNND1-236ENST00000533667 NUP50Q9UKX7 468 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 HCN4Q9Y3Q4 1203 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 ZNF541Q9H0D2 1346 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 KANTRA0A1W2PQU2 76 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 E7ESA3 106 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 FBP2O00757 339 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 SLC16A5O15375 505 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 CPNE3O75131 537 aaKnown RBP6.81□□□□□ -1.32
CTNND1-236ENST00000533667 EPCAMP16422 314 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 PDX1P52945 283 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 KCNC4Q03721 635 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 GRSF1Q12849 480 aaKnown RBP eCLIP6.81□□□□□ -1.32
CTNND1-236ENST00000533667 KLF1Q13351 362 aaPredicted RBP6.81□□□□□ -1.32
CTNND1-236ENST00000533667 DSG2Q14126 1118 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 MYLK3Q32MK0 819 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 MSS51Q4VC12 460 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 KLHL26Q53HC5 615 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 SNAP47Q5SQN1 464 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 PLEKHS1Q5SXH7 462 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 C1QTNF12Q5T7M4 302 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 SLC2A7Q6PXP3 512 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 CEP68Q76N32 757 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 ZDHHC14Q8IZN3 488 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 FAM46DQ8NEK8 389 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 C1orf216Q8TAB5 229 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 RHEBL1Q8TAI7 183 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 CPNE2Q96FN4 548 aaPredicted RBP6.81□□□□□ -1.32
CTNND1-236ENST00000533667 TMEM80Q96HE8 168 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 LRCH3Q96II8 777 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 KCNC2Q96PR1 638 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 CDK15Q96Q40 435 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 GAL3ST4Q96RP7 486 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 IL12RB2Q99665 862 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 CD244Q9BZW8 370 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 DPEP2Q9H4A9 486 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 ADAP2Q9NPF8 381 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 FAM53CQ9NYF3 392 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 EIF3KQ9UBQ5 218 aaKnown RBP6.81□□□□□ -1.32
CTNND1-236ENST00000533667 PCDHGB5Q9Y5G0 923 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 EDDM13A0A1B0GTR0 161 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 UPK3BL1B0FP48 263 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 UPK3BL2E5RIL1 263 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 ZNF670-ZNF695F2Z2N8 137 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 ZNF20P17024 532 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 MAGEA2P43356 314 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 MAZP56270 477 aaKnown RBP6.81□□□□□ -1.32
CTNND1-236ENST00000533667 TAS2R50P59544 299 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 UFM1P61960 85 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 ZNF45Q02386 682 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 MAB21L1Q13394 359 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 CLCA4Q14CN2 919 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 ATP6AP1Q15904 470 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 HACD2Q6Y1H2 254 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 PHC2Q8IXK0 858 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 PHTF2Q8N3S3 785 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 DBF4BQ8NFT6 615 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 OR6K6Q8NGW6 343 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 HSH2DQ96JZ2 352 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 TMEM168Q9H0V1 697 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 MMP27Q9H306 513 aa6.81□□□□□ -1.32
CTNND1-236ENST00000533667 SLC17A6Q9P2U8 582 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms