RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 DBTP11182 482 aaKnown RBP16.06■□□□□ 0.16
CTSB-228ENST00000533455 PTPN2P17706 415 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 GRK5P34947 590 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 ETV6P41212 452 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 GATMP50440 423 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 LRIT3Q3SXY7 679 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 TOR1AIP1Q5JTV8 583 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 SLC8B1Q6J4K2 584 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 RETSATQ6NUM9 610 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 TSEN54Q7Z6J9 526 aaKnown RBP16.06■□□□□ 0.16
CTSB-228ENST00000533455 PCSK9Q8NBP7 692 aaKnown RBP16.06■□□□□ 0.16
CTSB-228ENST00000533455 FAM83FQ8NEG4 500 aaPredicted RBP16.06■□□□□ 0.16
CTSB-228ENST00000533455 ZNF675Q8TD23 568 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 COL21A1Q96P44 957 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 COPS8Q99627 209 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 DOHHQ9BU89 302 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 HOXD1Q9GZZ0 328 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 ABCG8Q9H221 673 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 HCSTQ9UBK5 93 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 RUVBL1Q9Y265 456 aaKnown RBP16.06■□□□□ 0.16
CTSB-228ENST00000533455 LYVE1Q9Y5Y7 322 aa16.06■□□□□ 0.16
CTSB-228ENST00000533455 C1orf226A1L170 272 aa16.05■□□□□ 0.16
CTSB-228ENST00000533455 ADAMDEC1O15204 470 aa16.05■□□□□ 0.16
CTSB-228ENST00000533455 DLGAP3O95886 979 aa16.05■□□□□ 0.16
CTSB-228ENST00000533455 GABRB1P18505 474 aa16.05■□□□□ 0.16
CTSB-228ENST00000533455 PTX3P26022 381 aaPredicted RBP16.05■□□□□ 0.16
CTSB-228ENST00000533455 S100A5P33763 92 aa16.05■□□□□ 0.16
CTSB-228ENST00000533455 CHIT1Q13231 466 aa16.05■□□□□ 0.16
CTSB-228ENST00000533455 KRR1Q13601 381 aaKnown RBP16.05■□□□□ 0.16
CTSB-228ENST00000533455 IRF3Q14653 427 aa16.05■□□□□ 0.16
CTSB-228ENST00000533455 Q6ZPB1 254 aaPredicted RBP16.05■□□□□ 0.16
CTSB-228ENST00000533455 TSPAN33Q86UF1 283 aa16.05■□□□□ 0.16
CTSB-228ENST00000533455 CCDC103Q8IW40 242 aa16.05■□□□□ 0.16
CTSB-228ENST00000533455 PARP16Q8N5Y8 322 aa16.05■□□□□ 0.16
CTSB-228ENST00000533455 METTL2AQ96IZ6 378 aaKnown RBP16.05■□□□□ 0.16
CTSB-228ENST00000533455 YME1L1Q96TA2 773 aa16.05■□□□□ 0.16
CTSB-228ENST00000533455 MOV10Q9HCE1 1003 aaKnown RBP16.05■□□□□ 0.16
CTSB-228ENST00000533455 FZD4Q9ULV1 537 aa16.05■□□□□ 0.16
CTSB-228ENST00000533455 SLC22A14Q9Y267 594 aa16.05■□□□□ 0.16
CTSB-228ENST00000533455 PCDHGA2Q9Y5H1 932 aa16.05■□□□□ 0.16
CTSB-228ENST00000533455 PEX16Q9Y5Y5 336 aa16.05■□□□□ 0.16
CTSB-228ENST00000533455 ALPK3Q96L96 1907 aa16.05■□□□□ 0.16
CTSB-228ENST00000533455 C2orf78A6NCI8 922 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 NPIPB15A6NHN6 443 aaPredicted RBP16.04■□□□□ 0.16
CTSB-228ENST00000533455 GFYI3L273 518 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 SCAMP2O15127 329 aaKnown RBP16.04■□□□□ 0.16
CTSB-228ENST00000533455 SNX4O95219 450 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 OR56A5P0C7T3 313 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 ADORA3P0DMS8 318 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 LAMP1P11279 417 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 SPNP16150 400 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 GKP32189 559 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 AP1S2P56377 157 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 CDH18Q13634 790 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 LIPJQ5W064 366 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 CRTC1Q6UUV9 634 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 CAMKMTQ7Z624 323 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 TMEM173Q86WV6 379 aaPredicted RBP16.04■□□□□ 0.16
CTSB-228ENST00000533455 IFNL1Q8IU54 200 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 OR4C15Q8NGM1 316 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 WDR20Q8TBZ3 569 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 CRELD1Q96HD1 420 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 FEVQ99581 238 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 TMEM175Q9BSA9 504 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 DUSP26Q9BV47 211 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 C2orf49Q9BVC5 232 aaPredicted RBP16.04■□□□□ 0.16
CTSB-228ENST00000533455 RUBCNLQ9H714 662 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 SPATA6Q9NWH7 488 aaPredicted RBP16.04■□□□□ 0.16
CTSB-228ENST00000533455 RAPGEFL1Q9UHV5 662 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 GABRQQ9UN88 632 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 POFUT2Q9Y2G5 429 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 IFT52Q9Y366 437 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 THSD7BQ9C0I4 1608 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 A8MVJ9 347 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 TNFRSF11BO00300 401 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 ASNA1O43681 348 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 DYRK3O43781 588 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 AOC2O75106 756 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 NUDT7P0C024 238 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 ANXA8P13928 327 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 CYP2A7P20853 494 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 S100A1P23297 94 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 CASP3P42574 277 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 SEPHS1P49903 392 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 PPIGQ13427 754 aaKnown RBP eCLIP16.04■□□□□ 0.162e-12■□□□□ 8.5
CTSB-228ENST00000533455 EIF4HQ15056 248 aaKnown RBP16.04■□□□□ 0.16
CTSB-228ENST00000533455 RGNQ15493 299 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 TEAD4Q15561 434 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 APCDD1Q8J025 514 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 DEPDC4Q8N2C3 294 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 METTL4Q8N3J2 472 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 RNF175Q8N4F7 328 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 PAF1Q8N7H5 531 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 DENND6BQ8NEG7 585 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 OR10G2Q8NGC3 310 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 BCL7CQ8WUZ0 217 aaPredicted RBP16.04■□□□□ 0.16
CTSB-228ENST00000533455 CHTF18Q8WVB6 975 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 SH3KBP1Q96B97 665 aa16.04■□□□□ 0.16
CTSB-228ENST00000533455 C11orf24Q96F05 449 aaPredicted RBP16.04■□□□□ 0.16
CTSB-228ENST00000533455 ZNF226Q9NYT6 803 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms