RNA–Protein interactions for RNA: ENST00000533346.5

NUP98-220, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-220ENST00000533346 STAG3L4Q8TBR4 150 aa9.36□□□□□ -0.91
NUP98-220ENST00000533346 NT5CQ8TCD5 201 aa9.36□□□□□ -0.91
NUP98-220ENST00000533346 SLC44A1Q8WWI5 657 aa9.36□□□□□ -0.91
NUP98-220ENST00000533346 NEIL2Q969S2 332 aa9.36□□□□□ -0.91
NUP98-220ENST00000533346 RNF31Q96EP0 1072 aa9.36□□□□□ -0.91
NUP98-220ENST00000533346 VPS50Q96JG6 964 aa9.36□□□□□ -0.91
NUP98-220ENST00000533346 ATOH8Q96SQ7 321 aa9.36□□□□□ -0.91
NUP98-220ENST00000533346 ING2Q9H160 280 aa9.36□□□□□ -0.91
NUP98-220ENST00000533346 CAB39LQ9H9S4 337 aa9.36□□□□□ -0.91
NUP98-220ENST00000533346 NMRAL1Q9HBL8 299 aa9.36□□□□□ -0.91
NUP98-220ENST00000533346 MKKSQ9NPJ1 570 aaPredicted RBP9.36□□□□□ -0.91
NUP98-220ENST00000533346 C14orf105Q9NVL8 296 aa9.36□□□□□ -0.91
NUP98-220ENST00000533346 IRAK4Q9NWZ3 460 aa9.36□□□□□ -0.91
NUP98-220ENST00000533346 C5AR2Q9P296 337 aa9.36□□□□□ -0.91
NUP98-220ENST00000533346 ZNF282Q9UDV7 671 aaPredicted RBP9.36□□□□□ -0.91
NUP98-220ENST00000533346 FETUBQ9UGM5 382 aa9.36□□□□□ -0.91
NUP98-220ENST00000533346 ZFP69BQ9UJL9 534 aa9.36□□□□□ -0.91
NUP98-220ENST00000533346 PTBP2Q9UKA9 531 aaKnown RBP9.36□□□□□ -0.91
NUP98-220ENST00000533346 SH2B3Q9UQQ2 575 aa9.36□□□□□ -0.91
NUP98-220ENST00000533346 SLC22A14Q9Y267 594 aa9.36□□□□□ -0.91
NUP98-220ENST00000533346 PTRH2Q9Y3E5 179 aaKnown RBP9.36□□□□□ -0.91
NUP98-220ENST00000533346 MAP4K5Q9Y4K4 846 aa9.36□□□□□ -0.91
NUP98-220ENST00000533346 ZNF462Q96JM2 2506 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 A0A087X1B8 175 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 NPEPPSL1A6NEC2 478 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 AGPSO00116 658 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 TAPBPO15533 448 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 P2RX6O15547 441 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 PHGDHO43175 533 aaKnown RBP9.35□□□□□ -0.91
NUP98-220ENST00000533346 KLK8O60259 260 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 FAM155BO75949 473 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 GUCA1CO95843 209 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 C2P06681 752 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 LTA4HP09960 611 aaKnown RBP9.35□□□□□ -0.91
NUP98-220ENST00000533346 ZGLP1P0C6A0 271 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 SMIM10L1P0DMW3 83 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 CDH1P12830 882 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 GNAZP19086 355 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 SAT1P21673 171 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 CXCR2P25025 360 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 BCL6P41182 706 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 CASP2P42575 452 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 OR1D4P47884 311 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 SERPINB9P50453 376 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 REEP5Q00765 189 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 DLG1Q12959 904 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 TSTA3Q13630 321 aaPredicted RBP9.35□□□□□ -0.91
NUP98-220ENST00000533346 CSHL1Q14406 222 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 ACAP2Q15057 778 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 DCAF10Q5QP82 559 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 ATG9BQ674R7 924 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 METTL2BQ6P1Q9 378 aaKnown RBP9.35□□□□□ -0.91
NUP98-220ENST00000533346 NXPE4Q6UWF7 544 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 TRMT10CQ7L0Y3 403 aaKnown RBP9.35□□□□□ -0.91
NUP98-220ENST00000533346 PPP1R32Q7Z5V6 425 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 MRGPREQ86SM8 312 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 ASPGQ86U10 573 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 TBC1D19Q8N5T2 526 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 AMER3Q8N944 861 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 TRPV3Q8NET8 790 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 C9orf43Q8TAL5 461 aaPredicted RBP9.35□□□□□ -0.91
NUP98-220ENST00000533346 STT3BQ8TCJ2 826 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.35□□□□□ -0.91
NUP98-220ENST00000533346 DOCK10Q96BY6 2186 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 PYCR2Q96C36 320 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 SMIM10Q96HG1 83 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 CABS1Q96KC9 395 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 SMAD5Q99717 465 aaKnown RBP9.35□□□□□ -0.91
NUP98-220ENST00000533346 TRIM55Q9BYV6 548 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 TXLNGYQ9BZA5 131 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 DRC3Q9H069 523 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 CNOT10Q9H9A5 744 aaKnown RBP9.35□□□□□ -0.91
NUP98-220ENST00000533346 ACSS2Q9NR19 701 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 IGSF5Q9NSI5 407 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 ANAPC2Q9UJX6 822 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 TLK1Q9UKI8 766 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 ACOT9Q9Y305 439 aa9.35□□□□□ -0.91
NUP98-220ENST00000533346 A0A087WUV0 522 aaPredicted RBP9.34□□□□□ -0.91
NUP98-220ENST00000533346 LOC102723996A0A087X1L8 192 aa9.34□□□□□ -0.91
NUP98-220ENST00000533346 PYCARD-AS1I3L0S3 204 aa9.34□□□□□ -0.91
NUP98-220ENST00000533346 SOCS6O14544 535 aa9.34□□□□□ -0.91
NUP98-220ENST00000533346 KERAO60938 352 aa9.34□□□□□ -0.91
NUP98-220ENST00000533346 KLHL2O95198 593 aa9.34□□□□□ -0.91
NUP98-220ENST00000533346 EIF2S1P05198 315 aaKnown RBP9.34□□□□□ -0.91
NUP98-220ENST00000533346 SLC35G6P0C7Q6 338 aa9.34□□□□□ -0.91
NUP98-220ENST00000533346 C1GALT1C1LP0DN25 315 aa9.34□□□□□ -0.91
NUP98-220ENST00000533346 COL6A2P12110 1019 aa9.34□□□□□ -0.91
NUP98-220ENST00000533346 MTHFD2P13995 350 aa9.34□□□□□ -0.91
NUP98-220ENST00000533346 TNFRSF8P28908 595 aa9.34□□□□□ -0.91
NUP98-220ENST00000533346 AVPR1BP47901 424 aa9.34□□□□□ -0.91
NUP98-220ENST00000533346 KCNC1P48547 511 aa9.34□□□□□ -0.91
NUP98-220ENST00000533346 OCA2Q04671 838 aa9.34□□□□□ -0.91
NUP98-220ENST00000533346 OR4D1Q15615 310 aa9.34□□□□□ -0.91
NUP98-220ENST00000533346 TBCCQ15814 346 aa9.34□□□□□ -0.91
NUP98-220ENST00000533346 LACTB2Q53H82 288 aaPredicted RBP9.34□□□□□ -0.91
NUP98-220ENST00000533346 CATSPEREQ5SY80 951 aa9.34□□□□□ -0.91
NUP98-220ENST00000533346 TMEM205Q6UW68 189 aa9.34□□□□□ -0.91
NUP98-220ENST00000533346 IGFL3Q6UXB1 125 aa9.34□□□□□ -0.91
NUP98-220ENST00000533346 SLCO4C1Q6ZQN7 724 aa9.34□□□□□ -0.91
NUP98-220ENST00000533346 FRA10AC1Q70Z53 315 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms