RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 MSH3P20585 1137 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 NSG1P42857 185 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 IRF9Q00978 393 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 LDLRAP1Q5SW96 308 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 ZNF648Q5T619 568 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 DUS1LQ6P1R4 473 aaKnown RBP10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 GFRALQ6UXV0 394 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 PLD6Q8N2A8 252 aaKnown RBP10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 DDHD1Q8NEL9 900 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 NAT14Q8WUY8 206 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 HEXDCQ8WVB3 486 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 NACC2Q96BF6 587 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 PTERQ96BW5 349 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 FAM136AQ96C01 138 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 GPR21Q99679 349 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 SPOCK3Q9BQ16 436 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 EPS8L2Q9H6S3 715 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 GPAMQ9HCL2 828 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 ZNF358Q9NW07 568 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 TAS2R13Q9NYV9 303 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 SLC17A7Q9P2U7 560 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 GNPTGQ9UJJ9 305 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 GRID1Q9ULK0 1009 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 WDR37Q9Y2I8 494 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 MED16Q9Y2X0 877 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 PLLPQ9Y342 182 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 PTRH2Q9Y3E5 179 aaKnown RBP10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 SPG11Q96JI7 2443 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 MYO7BQ6PIF6 2116 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 CFAP99D6REC4 459 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 H3BMM5 538 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 GLRA3O75311 464 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 MTX2O75431 263 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 VPS26AO75436 327 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 ZWINTO95229 277 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 WISP3O95389 354 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 RALBP11234 206 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 ATP1B2P14415 290 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 CD9P21926 228 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 AKT1P31749 480 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 MDH1P40925 334 aaKnown RBP10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 SKIV2L2P42285 1042 aaKnown RBP10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 CA7P43166 264 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 PREPP48147 710 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 TDGF1P3P51864 188 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 SMSP52788 366 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 CASP6P55212 293 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 WDR4P57081 412 aaKnown RBP10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 CBX1P83916 185 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 TMEM115Q12893 351 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 PDAP1Q13442 181 aaKnown RBP10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 KHDC1Q4VXA5 237 aaKnown RBP10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 HHATQ5VTY9 493 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 MLIPQ5VWP3 458 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 ZNF324BQ6AW86 544 aaPredicted RBP10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 PAQR3Q6TCH7 311 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 SPATA6LQ8N4H0 392 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 OR2Y1Q8NGV0 311 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 OR1L3Q8NH93 324 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 KCTD4Q8WVF5 259 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 ANKRD49Q8WVL7 239 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 NXNL1Q96CM4 212 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 MTFMTQ96DP5 389 aaKnown RBP10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 PAIP2Q9BPZ3 127 aaKnown RBP10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 IQCGQ9H095 443 aaKnown RBP10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 POPDC3Q9HBV1 291 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 INTS9Q9NV88 658 aaKnown RBP10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 TMEM216Q9P0N5 145 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 ADAM21Q9UKJ8 722 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 DHRS7Q9Y394 339 aa10.84□□□□□ -0.67
TRAPPC4-213ENST00000533149 E5RI56 91 aa10.83□□□□□ -0.68
TRAPPC4-213ENST00000533149 E7EQ34 232 aa10.83□□□□□ -0.68
TRAPPC4-213ENST00000533149 TM9SF1O15321 606 aa10.83□□□□□ -0.68
TRAPPC4-213ENST00000533149 CDK14O94921 469 aa10.83□□□□□ -0.68
TRAPPC4-213ENST00000533149 AP2A2O94973 939 aa10.83□□□□□ -0.68
TRAPPC4-213ENST00000533149 KLHL2O95198 593 aa10.83□□□□□ -0.68
TRAPPC4-213ENST00000533149 OR56A5P0C7T3 313 aa10.83□□□□□ -0.68
TRAPPC4-213ENST00000533149 CCDC166P0CW27 439 aa10.83□□□□□ -0.68
TRAPPC4-213ENST00000533149 SLC26A3P40879 764 aa10.83□□□□□ -0.68
TRAPPC4-213ENST00000533149 GUCY1A3Q02108 690 aa10.83□□□□□ -0.68
TRAPPC4-213ENST00000533149 DLG1Q12959 904 aa10.83□□□□□ -0.68
TRAPPC4-213ENST00000533149 CSHL1Q14406 222 aa10.83□□□□□ -0.68
TRAPPC4-213ENST00000533149 INAQ16352 499 aa10.83□□□□□ -0.68
TRAPPC4-213ENST00000533149 RPE65Q16518 533 aa10.83□□□□□ -0.68
TRAPPC4-213ENST00000533149 PRAMEF13Q5VWM6 474 aa10.83□□□□□ -0.68
TRAPPC4-213ENST00000533149 ZNF385CQ66K41 422 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC4-213ENST00000533149 TTC19Q6DKK2 380 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC4-213ENST00000533149 UGT3A1Q6NUS8 523 aa10.83□□□□□ -0.68
TRAPPC4-213ENST00000533149 DET1Q7L5Y6 550 aa10.83□□□□□ -0.68
TRAPPC4-213ENST00000533149 PPP1R32Q7Z5V6 425 aa10.83□□□□□ -0.68
TRAPPC4-213ENST00000533149 CCDC91Q7Z6B0 441 aa10.83□□□□□ -0.68
TRAPPC4-213ENST00000533149 TBC1D1Q86TI0 1168 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC4-213ENST00000533149 ZNF547Q8IVP9 402 aa10.83□□□□□ -0.68
TRAPPC4-213ENST00000533149 CENPLQ8N0S6 344 aaPredicted RBP10.83□□□□□ -0.68
TRAPPC4-213ENST00000533149 RASGEF1AQ8N9B8 481 aa10.83□□□□□ -0.68
TRAPPC4-213ENST00000533149 ARMC2Q8NEN0 867 aa10.83□□□□□ -0.68
TRAPPC4-213ENST00000533149 LKAAEAR1Q8TD35 194 aa10.83□□□□□ -0.68
TRAPPC4-213ENST00000533149 ZFPM2Q8WW38 1151 aa10.83□□□□□ -0.68
TRAPPC4-213ENST00000533149 NR4A3Q92570 626 aa10.83□□□□□ -0.68
TRAPPC4-213ENST00000533149 KCNJ9Q92806 393 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms