RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 HMGB1P1B2RPK0 211 aaPredicted RBP10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 OR7A17O14581 309 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 ZSCAN9O15535 394 aaPredicted RBP10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 ZNF749O43361 778 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 UGDHO60701 494 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 PRAMEF4O60810 478 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 CLDN9O95484 217 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 MLYCDO95822 493 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 OTCP00480 354 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 NTRK1P04629 796 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 BPGMP07738 259 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 GSTM2P28161 218 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 ALDH3A1P30838 453 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 AHRP35869 848 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 BCL6P41182 706 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 HNF4AP41235 474 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 SCTRP47872 440 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 CCNG1P51959 295 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 SLC18A1P54219 525 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 ARSFP54793 590 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 REEP5Q00765 189 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 RBBP7Q16576 425 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 MANEAQ5SRI9 462 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 YOD1Q5VVQ6 348 aaPredicted RBP10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 PRAMEF9Q5VWM5 478 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 MED27Q6P2C8 311 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 MILR1Q7Z6M3 343 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 ASPGQ86U10 573 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 ZNF655Q8N720 491 aaPredicted RBP10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 CSNK1A1LQ8N752 337 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 TTC29Q8NA56 475 aaPredicted RBP10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 CAMKVQ8NCB2 501 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 ZNF740Q8NDX6 193 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 TTLQ8NG68 377 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 TRPC4APQ8TEL6 797 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 SLC13A3Q8WWT9 602 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 FGF11Q92914 225 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 PMEPA1Q969W9 287 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 SEC16BQ96JE7 1060 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 MAGEB10Q96LZ2 347 aaPredicted RBP10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 ZNF285Q96NJ3 590 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 NSUN5Q96P11 429 aaKnown RBP10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 NTMT1Q9BV86 223 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 ULBP3Q9BZM4 244 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 DRC3Q9H069 523 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 CCDC86Q9H6F5 360 aaKnown RBP10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 ACTR5Q9H9F9 607 aaPredicted RBP10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 ZBTB26Q9HCK0 441 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 PRM3Q9NNZ6 103 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 ENAMQ9NRM1 1142 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 STARD5Q9NSY2 213 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 ZFP69BQ9UJL9 534 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 STK38LQ9Y2H1 464 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 PCDHB3Q9Y5E6 796 aa10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 COL27A1Q8IZC6 1860 aaPredicted RBP10.74□□□□□ -0.69
TRAPPC4-211ENST00000533012 TMEM120BA0PK00 339 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 HYKKA2RU49 373 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 H3BMH7 237 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 STMND1H3BQB6 276 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 BIRC5O15392 142 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 CPNE3O75131 537 aaKnown RBP10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 STK17BO94768 372 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 KIAA0754O94854 1291 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 TIAF1O95411 115 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 SERPIND1P05546 499 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 CTSBP07858 339 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 SLC35G6P0C7Q6 338 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 CCNYL3P0C7X3 344 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 ZNF28P17035 718 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 TSPAN8P19075 237 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 ALAS2P22557 587 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 ETV4P43268 484 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 EMP3P54852 163 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 RGS1Q08116 209 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 PWP1Q13610 501 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 MPP2Q14168 576 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 E2F2Q14209 437 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 PCLAFQ15004 111 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 NDUFA9Q16795 377 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 TBC1D25Q3MII6 688 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 PRAMEF17Q5VTA0 474 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 HHATQ5VTY9 493 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 RPS27LQ71UM5 84 aaKnown RBP10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 ZNF771Q7L3S4 317 aaPredicted RBP10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 NUDCD3Q8IVD9 361 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 ANKRD42Q8N9B4 389 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 L3MBTL4Q8NA19 623 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 TRPV3Q8NET8 790 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 OR52B6Q8NGF0 335 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 MDM1Q8TC05 714 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 GATA6Q92908 595 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 REPS1Q96D71 796 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 CLIP3Q96DZ5 547 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 TM4SF19Q96DZ7 209 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 MOCOSQ96EN8 888 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 CNDP1Q96KN2 507 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 CDK15Q96Q40 435 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 SPRY4Q9C004 299 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 SPNS1Q9H2V7 528 aa10.73□□□□□ -0.69
TRAPPC4-211ENST00000533012 ACSS2Q9NR19 701 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms