RNA–Protein interactions for RNA: ENST00000532550.1

PHRF1-204, Transcript of PHD and ring finger domains 1, humanhuman

TSL 3

Gene PHRF1, Length 748 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-204ENST00000532550 ACPPP15309 386 aa16.36■□□□□ 0.21
PHRF1-204ENST00000532550 CD97P48960 835 aa16.36■□□□□ 0.21
PHRF1-204ENST00000532550 CSHL1Q14406 222 aa16.36■□□□□ 0.21
PHRF1-204ENST00000532550 ZXDCQ2QGD7 858 aaPredicted RBP16.36■□□□□ 0.21
PHRF1-204ENST00000532550 AGAP7PQ5VUJ5 663 aa16.36■□□□□ 0.21
PHRF1-204ENST00000532550 ATG9BQ674R7 924 aa16.36■□□□□ 0.21
PHRF1-204ENST00000532550 SLC6A19Q695T7 634 aa16.36■□□□□ 0.21
PHRF1-204ENST00000532550 IGFL3Q6UXB1 125 aa16.36■□□□□ 0.21
PHRF1-204ENST00000532550 CYS1Q717R9 158 aa16.36■□□□□ 0.21
PHRF1-204ENST00000532550 VN1R4Q7Z5H5 301 aa16.36■□□□□ 0.21
PHRF1-204ENST00000532550 ASPGQ86U10 573 aa16.36■□□□□ 0.21
PHRF1-204ENST00000532550 TBC1D19Q8N5T2 526 aa16.36■□□□□ 0.21
PHRF1-204ENST00000532550 AMER3Q8N944 861 aa16.36■□□□□ 0.21
PHRF1-204ENST00000532550 TM4SF19Q96DZ7 209 aa16.36■□□□□ 0.21
PHRF1-204ENST00000532550 AGAP4Q96P64 663 aa16.36■□□□□ 0.21
PHRF1-204ENST00000532550 MACROD1Q9BQ69 325 aa16.36■□□□□ 0.21
PHRF1-204ENST00000532550 TGIF2Q9GZN2 237 aa16.36■□□□□ 0.21
PHRF1-204ENST00000532550 SMYD2Q9NRG4 433 aa16.36■□□□□ 0.21
PHRF1-204ENST00000532550 GRHL1Q9NZI5 618 aa16.36■□□□□ 0.21
PHRF1-204ENST00000532550 VPS4AQ9UN37 437 aa16.36■□□□□ 0.21
PHRF1-204ENST00000532550 IDSB3KWA1 339 aa16.35■□□□□ 0.21
PHRF1-204ENST00000532550 H0YIG0 161 aa16.35■□□□□ 0.21
PHRF1-204ENST00000532550 CDC7O00311 574 aa16.35■□□□□ 0.21
PHRF1-204ENST00000532550 PIAS1O75925 651 aa16.35■□□□□ 0.21
PHRF1-204ENST00000532550 SORBS2O94875 1100 aaKnown RBP16.35■□□□□ 0.21
PHRF1-204ENST00000532550 GSTA2P09210 222 aa16.35■□□□□ 0.21
PHRF1-204ENST00000532550 VARSP26640 1264 aaKnown RBP16.35■□□□□ 0.21
PHRF1-204ENST00000532550 BCL6P41182 706 aa16.35■□□□□ 0.21
PHRF1-204ENST00000532550 POU4F1Q01851 419 aa16.35■□□□□ 0.21
PHRF1-204ENST00000532550 ZNF460Q14592 562 aa16.35■□□□□ 0.21
PHRF1-204ENST00000532550 SYT16Q17RD7 645 aa16.35■□□□□ 0.21
PHRF1-204ENST00000532550 PLEKHN1Q494U1 663 aaPredicted RBP16.35■□□□□ 0.21
PHRF1-204ENST00000532550 SBSNQ6UWP8 590 aa16.35■□□□□ 0.21
PHRF1-204ENST00000532550 NDUFAF7Q7L592 441 aa16.35■□□□□ 0.21
PHRF1-204ENST00000532550 CCDC25Q86WR0 208 aa16.35■□□□□ 0.21
PHRF1-204ENST00000532550 CEP97Q8IW35 865 aa16.35■□□□□ 0.21
PHRF1-204ENST00000532550 MFSD9Q8NBP5 474 aa16.35■□□□□ 0.21
PHRF1-204ENST00000532550 ABHD11Q8NFV4 315 aa16.35■□□□□ 0.21
PHRF1-204ENST00000532550 OR9A4Q8NGU2 314 aa16.35■□□□□ 0.21
PHRF1-204ENST00000532550 TSPAN17Q96FV3 270 aa16.35■□□□□ 0.21
PHRF1-204ENST00000532550 THOC3Q96J01 351 aaKnown RBP16.35■□□□□ 0.21
PHRF1-204ENST00000532550 EGFL8Q99944 293 aa16.35■□□□□ 0.21
PHRF1-204ENST00000532550 LHPPQ9H008 270 aa16.35■□□□□ 0.21
PHRF1-204ENST00000532550 POPDC3Q9HBV1 291 aa16.35■□□□□ 0.21
PHRF1-204ENST00000532550 ANKHQ9HCJ1 492 aa16.35■□□□□ 0.21
PHRF1-204ENST00000532550 LUZP4Q9P127 313 aa16.35■□□□□ 0.21
PHRF1-204ENST00000532550 CTNNAL1Q9UBT7 734 aa16.35■□□□□ 0.21
PHRF1-204ENST00000532550 IKZF3Q9UKT9 509 aa16.35■□□□□ 0.21
PHRF1-204ENST00000532550 B3GNT3Q9Y2A9 372 aa16.35■□□□□ 0.21
PHRF1-204ENST00000532550 MTO1Q9Y2Z2 717 aaKnown RBP16.35■□□□□ 0.21
PHRF1-204ENST00000532550 MRPS2Q9Y399 296 aaKnown RBP16.35■□□□□ 0.21
PHRF1-204ENST00000532550 DYRK1BQ9Y463 629 aa16.35■□□□□ 0.21
PHRF1-204ENST00000532550 UBR5O95071 2799 aaPredicted RBP16.35■□□□□ 0.21
PHRF1-204ENST00000532550 NPEPPSL1A6NEC2 478 aa16.34■□□□□ 0.21
PHRF1-204ENST00000532550 PCDH17O14917 1159 aa16.34■□□□□ 0.21
PHRF1-204ENST00000532550 OR1F1O43749 312 aa16.34■□□□□ 0.21
PHRF1-204ENST00000532550 NSA2O95478 260 aaKnown RBP16.34■□□□□ 0.21
PHRF1-204ENST00000532550 HPP00738 406 aa16.34■□□□□ 0.21
PHRF1-204ENST00000532550 SLC35G6P0C7Q6 338 aa16.34■□□□□ 0.21
PHRF1-204ENST00000532550 MAT1AQ00266 395 aaKnown RBP16.34■□□□□ 0.21
PHRF1-204ENST00000532550 CKAP4Q07065 602 aaKnown RBP16.34■□□□□ 0.21
PHRF1-204ENST00000532550 INPP5JQ15735 1006 aaPredicted RBP16.34■□□□□ 0.21
PHRF1-204ENST00000532550 FAAH2Q6GMR7 532 aa16.34■□□□□ 0.21
PHRF1-204ENST00000532550 TMEM214Q6NUQ4 689 aaKnown RBP16.34■□□□□ 0.21
PHRF1-204ENST00000532550 FRA10AC1Q70Z53 315 aa16.34■□□□□ 0.21
PHRF1-204ENST00000532550 OR4K1Q8NGD4 311 aa16.34■□□□□ 0.21
PHRF1-204ENST00000532550 ANKRD49Q8WVL7 239 aa16.34■□□□□ 0.21
PHRF1-204ENST00000532550 SLC5A11Q8WWX8 675 aa16.34■□□□□ 0.21
PHRF1-204ENST00000532550 C8orf44Q96CB5 159 aa16.34■□□□□ 0.21
PHRF1-204ENST00000532550 OR4K3Q96R72 315 aa16.34■□□□□ 0.21
PHRF1-204ENST00000532550 CPNE1Q99829 537 aa16.34■□□□□ 0.21
PHRF1-204ENST00000532550 ZNF160Q9HCG1 818 aa16.34■□□□□ 0.21
PHRF1-204ENST00000532550 MAP10Q9P2G4 905 aa16.34■□□□□ 0.21
PHRF1-204ENST00000532550 MKL2Q9ULH7 1088 aa16.34■□□□□ 0.21
PHRF1-204ENST00000532550 PRRC2CQ9Y520 2896 aaKnown RBP16.33■□□□□ 0.21
PHRF1-204ENST00000532550 NSG1A0A0A6YYJ2 146 aa16.33■□□□□ 0.2
PHRF1-204ENST00000532550 TCRBV9S1A1TA0A576 114 aa16.33■□□□□ 0.2
PHRF1-204ENST00000532550 CXorf49A8MYA2 514 aaPredicted RBP16.33■□□□□ 0.2
PHRF1-204ENST00000532550 HNMTP50135 292 aa16.33■□□□□ 0.2
PHRF1-204ENST00000532550 CDKL1Q00532 357 aa16.33■□□□□ 0.2
PHRF1-204ENST00000532550 MEF2AQ02078 507 aaPredicted RBP16.33■□□□□ 0.2
PHRF1-204ENST00000532550 USP10Q14694 798 aaKnown RBP16.33■□□□□ 0.2
PHRF1-204ENST00000532550 PPP1R3AQ16821 1122 aa16.33■□□□□ 0.2
PHRF1-204ENST00000532550 CATSPEREQ5SY80 951 aa16.33■□□□□ 0.2
PHRF1-204ENST00000532550 ZNF572Q7Z3I7 529 aaPredicted RBP16.33■□□□□ 0.2
PHRF1-204ENST00000532550 ADAMTSL2Q86TH1 951 aa16.33■□□□□ 0.2
PHRF1-204ENST00000532550 THOC6Q86W42 341 aaKnown RBP16.33■□□□□ 0.2
PHRF1-204ENST00000532550 CTAGE3PQ8IX95 158 aa16.33■□□□□ 0.2
PHRF1-204ENST00000532550 KBTBD2Q8IY47 623 aa16.33■□□□□ 0.2
PHRF1-204ENST00000532550 Q8NA96 180 aa16.33■□□□□ 0.2
PHRF1-204ENST00000532550 KCT2Q8NC54 265 aa16.33■□□□□ 0.2
PHRF1-204ENST00000532550 OR51Q1Q8NH59 317 aa16.33■□□□□ 0.2
PHRF1-204ENST00000532550 ZCCHC10Q8TBK6 192 aa16.33■□□□□ 0.2
PHRF1-204ENST00000532550 FBXO25Q8TCJ0 367 aa16.33■□□□□ 0.2
PHRF1-204ENST00000532550 METTL21AQ8WXB1 218 aa16.33■□□□□ 0.2
PHRF1-204ENST00000532550 NEIL2Q969S2 332 aa16.33■□□□□ 0.2
PHRF1-204ENST00000532550 MESP1Q9BRJ9 268 aa16.33■□□□□ 0.2
PHRF1-204ENST00000532550 MCMBPQ9BTE3 642 aa16.33■□□□□ 0.2
PHRF1-204ENST00000532550 SARGQ9BW04 601 aa16.33■□□□□ 0.2
PHRF1-204ENST00000532550 PHACTR1Q9C0D0 580 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms