RNA–Protein interactions for RNA: ENST00000532149.1

CHD7-211, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 2

Gene CHD7, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-211ENST00000532149 MFSD2AQ8NA29 543 aa11.83□□□□□ -0.52
CHD7-211ENST00000532149 OR2L8Q8NGY9 312 aa11.83□□□□□ -0.52
CHD7-211ENST00000532149 GOT1L1Q8NHS2 421 aaPredicted RBP11.83□□□□□ -0.52
CHD7-211ENST00000532149 NAT14Q8WUY8 206 aa11.83□□□□□ -0.52
CHD7-211ENST00000532149 SNX19Q92543 992 aa11.83□□□□□ -0.52
CHD7-211ENST00000532149 GATA6Q92908 595 aa11.83□□□□□ -0.52
CHD7-211ENST00000532149 FAM120BQ96EK7 910 aaKnown RBP11.83□□□□□ -0.52
CHD7-211ENST00000532149 APIPQ96GX9 242 aa11.83□□□□□ -0.52
CHD7-211ENST00000532149 ZNF597Q96LX8 424 aa11.83□□□□□ -0.52
CHD7-211ENST00000532149 ZNF583Q96ND8 569 aa11.83□□□□□ -0.52
CHD7-211ENST00000532149 SLC39A3Q9BRY0 314 aa11.83□□□□□ -0.52
CHD7-211ENST00000532149 DUSP26Q9BV47 211 aa11.83□□□□□ -0.52
CHD7-211ENST00000532149 SARGQ9BW04 601 aa11.83□□□□□ -0.52
CHD7-211ENST00000532149 PAIP1Q9H074 479 aaKnown RBP11.83□□□□□ -0.52
CHD7-211ENST00000532149 REEP4Q9H6H4 257 aa11.83□□□□□ -0.52
CHD7-211ENST00000532149 KIR3DX1Q9H7L2 352 aa11.83□□□□□ -0.52
CHD7-211ENST00000532149 CD320Q9NPF0 282 aa11.83□□□□□ -0.52
CHD7-211ENST00000532149 DMRT3Q9NQL9 472 aa11.83□□□□□ -0.52
CHD7-211ENST00000532149 AGPAT4Q9NRZ5 378 aa11.83□□□□□ -0.52
CHD7-211ENST00000532149 NDUFA13Q9P0J0 144 aa11.83□□□□□ -0.52
CHD7-211ENST00000532149 MMP17Q9ULZ9 603 aa11.83□□□□□ -0.52
CHD7-211ENST00000532149 ZFR2Q9UPR6 939 aaKnown RBP11.83□□□□□ -0.52
CHD7-211ENST00000532149 SAMD4AQ9UPU9 718 aaKnown RBP11.83□□□□□ -0.52
CHD7-211ENST00000532149 DLGAP4Q9Y2H0 992 aa11.83□□□□□ -0.52
CHD7-211ENST00000532149 TMEM98Q9Y2Y6 226 aa11.83□□□□□ -0.52
CHD7-211ENST00000532149 GNG14A0A1W2PPG7 69 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 MAGEB17A8MXT2 336 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 PCDH7O60245 1069 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 PRAMEF4O60810 478 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 CLEC3AO75596 197 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 CEACAM5P06731 702 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 GPX2P18283 190 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 CD22P20273 847 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 SHMT2P34897 504 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 CCR5P51681 352 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 NEK2P51955 445 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 DGKEP52429 567 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 DGKQP52824 942 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 TXNL4AP83876 142 aaKnown RBP11.82□□□□□ -0.52
CHD7-211ENST00000532149 RELAQ04206 551 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 FOLH1Q04609 750 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 PRDX1Q06830 199 aaKnown RBP11.82□□□□□ -0.52
CHD7-211ENST00000532149 RBBP4Q09028 425 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 SLBPQ14493 270 aaKnown RBP eCLIP11.82□□□□□ -0.52
CHD7-211ENST00000532149 NFATC4Q14934 902 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 ATP6AP1Q15904 470 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 AAK1Q2M2I8 961 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 PRAMEF9Q5VWM5 478 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 ABRAXAS1Q6UWZ7 409 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 ZBTB49Q6ZSB9 765 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 TRIM74Q86UV6 250 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 CALHM3Q86XJ0 350 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 DCP2Q8IU60 420 aaKnown RBP11.82□□□□□ -0.52
CHD7-211ENST00000532149 SPPL2CQ8IUH8 684 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 ADGRG5Q8IZF4 528 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 SLC44A3Q8N4M1 653 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 AVL9Q8NBF6 648 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 CANT1Q8WVQ1 401 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 N4BP2L2Q92802 583 aaPredicted RBP11.82□□□□□ -0.52
CHD7-211ENST00000532149 NCLNQ969V3 563 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 TBC1D20Q96BZ9 403 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 PPM1MQ96MI6 270 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 WDR92Q96MX6 357 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 TSSK3Q96PN8 268 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 OR2M4Q96R27 311 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 PANX1Q96RD7 426 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 HBEGFQ99075 208 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 MTERF1Q99551 399 aaKnown RBP11.82□□□□□ -0.52
CHD7-211ENST00000532149 PKP2Q99959 881 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 MKRN2Q9H000 416 aaKnown RBP11.82□□□□□ -0.52
CHD7-211ENST00000532149 PCED1AQ9H1Q7 454 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 TMEM184CQ9NVA4 438 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 TRNAU1APQ9NX07 287 aaKnown RBP11.82□□□□□ -0.52
CHD7-211ENST00000532149 THUMPD1Q9NXG2 353 aaKnown RBP11.82□□□□□ -0.52
CHD7-211ENST00000532149 OR6C2Q9NZP2 312 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 VAPAQ9P0L0 249 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 FAM8A1Q9UBU6 413 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 RPS6KA6Q9UK32 745 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 PACSIN3Q9UKS6 424 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 VPS4AQ9UN37 437 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 ICKQ9UPZ9 632 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 MRPS17Q9Y2R5 130 aaKnown RBP11.82□□□□□ -0.52
CHD7-211ENST00000532149 TICRRQ7Z2Z1 1910 aa11.82□□□□□ -0.52
CHD7-211ENST00000532149 LAMA2P24043 3122 aaKnown RBP11.81□□□□□ -0.52
CHD7-211ENST00000532149 TCRBV5S2A0A599 114 aa11.81□□□□□ -0.52
CHD7-211ENST00000532149 ARHGAP10A1A4S6 786 aa11.81□□□□□ -0.52
CHD7-211ENST00000532149 OR5K4A6NMS3 321 aa11.81□□□□□ -0.52
CHD7-211ENST00000532149 PLK4O00444 970 aa11.81□□□□□ -0.52
CHD7-211ENST00000532149 DPM1O60762 260 aa11.81□□□□□ -0.52
CHD7-211ENST00000532149 ADAM23O75077 832 aa11.81□□□□□ -0.52
CHD7-211ENST00000532149 EGFP01133 1207 aa11.81□□□□□ -0.52
CHD7-211ENST00000532149 ZNF26P17031 533 aaPredicted RBP11.81□□□□□ -0.52
CHD7-211ENST00000532149 ATP6V1B2P21281 511 aa11.81□□□□□ -0.52
CHD7-211ENST00000532149 AHRP35869 848 aa11.81□□□□□ -0.52
CHD7-211ENST00000532149 WASP42768 502 aa11.81□□□□□ -0.52
CHD7-211ENST00000532149 RPS6KA3P51812 740 aa11.81□□□□□ -0.52
CHD7-211ENST00000532149 SEC13P55735 322 aa11.81□□□□□ -0.52
CHD7-211ENST00000532149 SH3BGRP55822 239 aaPredicted RBP11.81□□□□□ -0.52
CHD7-211ENST00000532149 TGM3Q08188 693 aa11.81□□□□□ -0.52
CHD7-211ENST00000532149 VAC14Q08AM6 782 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms