RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 ATXN7L1Q9ULK2 861 aaPredicted RBP12□□□□□ -0.49
COPB1-208ENST00000532088 EPB41L3Q9Y2J2 1087 aaPredicted RBP12□□□□□ -0.49
COPB1-208ENST00000532088 GPC6Q9Y625 555 aaPredicted RBP12□□□□□ -0.49
COPB1-208ENST00000532088 PCM1Q15154 2024 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 ZNF292O60281 2723 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 IGHV5-51A0A0C4DH38 117 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 SPAARA0A1B0GVQ0 90 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 TRBC2A0A5B9 178 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 TERTO14746 1132 aaKnown RBP11.99□□□□□ -0.49
COPB1-208ENST00000532088 RASSF9O75901 435 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 ESRRBO95718 433 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 MT-CO3P00414 261 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 ENO1P06733 434 aaKnown RBP11.99□□□□□ -0.49
COPB1-208ENST00000532088 NEFHP12036 1026 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 JUPP14923 745 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 NELFEP18615 380 aaKnown RBP11.99□□□□□ -0.49
COPB1-208ENST00000532088 PDX1P52945 283 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 CDH13P55290 713 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 RPS15AP62244 130 aaKnown RBP11.99□□□□□ -0.49
COPB1-208ENST00000532088 CHIT1Q13231 466 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 STX3Q13277 289 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 EIF3IQ13347 325 aaKnown RBP11.99□□□□□ -0.49
COPB1-208ENST00000532088 HIST2H2ACQ16777 129 aaPredicted RBP11.99□□□□□ -0.49
COPB1-208ENST00000532088 XKR6Q5GH73 641 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 CATSPEREQ5SY80 951 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 FCRL6Q6DN72 434 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 HIST2H2AA3Q6FI13 130 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 RIPOR1Q6ZS17 1223 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 RNF165Q6ZSG1 346 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 GPRIN3Q6ZVF9 776 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 MILR1Q7Z6M3 343 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 TRIM73Q86UV7 250 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 ALYREFQ86V81 257 aaKnown RBP11.99□□□□□ -0.49
COPB1-208ENST00000532088 GALNT15Q8N3T1 639 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 DCBLD1Q8N8Z6 715 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 TRPC4APQ8TEL6 797 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 AGAP11Q8TF27 550 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 DYDC1Q8WWB3 177 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 CKAP2Q8WWK9 683 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 ATP6V1E2Q96A05 226 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 REPS1Q96D71 796 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 LIN37Q96GY3 246 aaPredicted RBP11.99□□□□□ -0.49
COPB1-208ENST00000532088 CCDC74BQ96LY2 380 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 MAGEB18Q96M61 343 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 ZFYVE21Q9BQ24 234 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 SLC29A3Q9BZD2 475 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 STRADBQ9C0K7 418 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 CCDC134Q9H6E4 229 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 SYNDIG1Q9H7V2 258 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 MANSC1Q9H8J5 431 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 ACTR8Q9H981 624 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 PDE7BQ9NP56 450 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 MLXIPLQ9NP71 852 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 SEMA4BQ9NPR2 832 aaPredicted RBP11.99□□□□□ -0.49
COPB1-208ENST00000532088 THAP1Q9NVV9 213 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 GEMIN8Q9NWZ8 242 aaKnown RBP11.99□□□□□ -0.49
COPB1-208ENST00000532088 PSD3Q9NYI0 1048 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 AKAP7Q9P0M2 348 aaPredicted RBP11.99□□□□□ -0.49
COPB1-208ENST00000532088 ADGRE2Q9UHX3 823 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 PILRAQ9UKJ1 303 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 SH2B3Q9UQQ2 575 aa11.99□□□□□ -0.49
COPB1-208ENST00000532088 WDR91A4D1P6 747 aa11.98□□□□□ -0.49
COPB1-208ENST00000532088 SLC9B1P1A6NJY1 282 aa11.98□□□□□ -0.49
COPB1-208ENST00000532088 H0YIV9 168 aa11.98□□□□□ -0.49
COPB1-208ENST00000532088 H7BY64 318 aa11.98□□□□□ -0.49
COPB1-208ENST00000532088 KIF1CO43896 1103 aaKnown RBP11.98□□□□□ -0.49
COPB1-208ENST00000532088 SRPX2O60687 465 aaPredicted RBP11.98□□□□□ -0.49
COPB1-208ENST00000532088 PRAMEF4O60810 478 aa11.98□□□□□ -0.49
COPB1-208ENST00000532088 SNNO75324 88 aaPredicted RBP11.98□□□□□ -0.49
COPB1-208ENST00000532088 FGF4P08620 206 aa11.98□□□□□ -0.49
COPB1-208ENST00000532088 BGNP21810 368 aa11.98□□□□□ -0.49
COPB1-208ENST00000532088 AHRP35869 848 aa11.98□□□□□ -0.49
COPB1-208ENST00000532088 ABCE1P61221 599 aaKnown RBP11.98□□□□□ -0.49
COPB1-208ENST00000532088 ACY1Q03154 408 aa11.98□□□□□ -0.49
COPB1-208ENST00000532088 DOC2AQ14183 400 aa11.98□□□□□ -0.49
COPB1-208ENST00000532088 PUM1Q14671 1186 aaKnown RBP eCLIP11.98□□□□□ -0.49
COPB1-208ENST00000532088 ZIC1Q15915 447 aa11.98□□□□□ -0.49
COPB1-208ENST00000532088 RBBP7Q16576 425 aa11.98□□□□□ -0.49
COPB1-208ENST00000532088 ISXQ2M1V0 245 aa11.98□□□□□ -0.49
COPB1-208ENST00000532088 ARL13AQ5H913 290 aaPredicted RBP11.98□□□□□ -0.49
COPB1-208ENST00000532088 MANEAQ5SRI9 462 aa11.98□□□□□ -0.49
COPB1-208ENST00000532088 TMTC4Q5T4D3 741 aa11.98□□□□□ -0.49
COPB1-208ENST00000532088 PRAMEF9Q5VWM5 478 aa11.98□□□□□ -0.49
COPB1-208ENST00000532088 DHRS13Q6UX07 377 aa11.98□□□□□ -0.49
COPB1-208ENST00000532088 LAS2Q8IYD9 372 aa11.98□□□□□ -0.49
COPB1-208ENST00000532088 DNAJC22Q8N4W6 341 aa11.98□□□□□ -0.49
COPB1-208ENST00000532088 AGBL5Q8NDL9 886 aa11.98□□□□□ -0.49
COPB1-208ENST00000532088 OR4F6Q8NGB9 312 aa11.98□□□□□ -0.49
COPB1-208ENST00000532088 OR52B6Q8NGF0 335 aa11.98□□□□□ -0.49
COPB1-208ENST00000532088 OR8K5Q8NH50 307 aa11.98□□□□□ -0.49
COPB1-208ENST00000532088 LRRC8CQ8TDW0 803 aa11.98□□□□□ -0.49
COPB1-208ENST00000532088 NANOS1Q8WY41 292 aaKnown RBP11.98□□□□□ -0.49
COPB1-208ENST00000532088 ZNF75CPQ92670 426 aaPredicted RBP11.98□□□□□ -0.49
COPB1-208ENST00000532088 ZNF285Q96NJ3 590 aa11.98□□□□□ -0.49
COPB1-208ENST00000532088 PRAP1Q96NZ9 151 aa11.98□□□□□ -0.49
COPB1-208ENST00000532088 RHBGQ9H310 441 aa11.98□□□□□ -0.49
COPB1-208ENST00000532088 RUBCNLQ9H714 662 aa11.98□□□□□ -0.49
COPB1-208ENST00000532088 ABCF3Q9NUQ8 709 aa11.98□□□□□ -0.49
COPB1-208ENST00000532088 PPT2Q9UMR5 302 aa11.98□□□□□ -0.49
COPB1-208ENST00000532088 CLCA2Q9UQC9 943 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms