RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 FOXA2Q9Y261 457 aaPredicted RBP2.7□□□□□ -1.98
CD44-234ENST00000531873 TDRKHQ9Y2W6 561 aaKnown RBP2.7□□□□□ -1.98
CD44-234ENST00000531873 SYCE3A1L190 88 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 ANTXRLA6NF34 631 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 CCDC69A6NI79 296 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 LACTBL1A8MY62 500 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 C16orf97H3BN30 126 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 SCO2O43819 266 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 PRPSAP2O60256 369 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 B3GALNT1O75752 331 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 STAM2O75886 525 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 NTN1O95631 604 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 ATP1B1P05026 303 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 UGT1A6P19224 532 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 IL10P22301 178 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 LHCGRP22888 699 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 SRD5A2P31213 254 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 CLDN17P56750 224 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 FKBP1BP68106 108 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 GPR17Q13304 367 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 MSLNQ13421 630 aaPredicted RBP2.69□□□□□ -1.98
CD44-234ENST00000531873 PDE7AQ13946 482 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 KEAP1Q14145 624 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 PDK1Q15118 436 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 MAPK11Q15759 364 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 EXT1Q16394 746 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 ACKR1Q16570 336 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 XKR6Q5GH73 641 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 TECRLQ5HYJ1 363 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 WDR38Q5JTN6 314 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 CCNYL2Q5T2Q4 361 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 NADSYN1Q6IA69 706 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 OR4C11Q6IEV9 310 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 FUT10Q6P4F1 479 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 CTR9Q6PD62 1173 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 ZCCHC12Q6PEW1 402 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 ZNF771Q7L3S4 317 aaPredicted RBP2.69□□□□□ -1.98
CD44-234ENST00000531873 PRUNE1Q86TP1 453 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 ISCA2Q86U28 154 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 NFE4Q86UQ8 179 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 TMEM126BQ8IUX1 230 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 HDDC3Q8N4P3 179 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 SMYD1Q8NB12 490 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 KBTBD8Q8NFY9 601 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 KIAA1524Q8TCG1 905 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 SCARB1Q8WTV0 552 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 FCAMRQ8WWV6 532 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 PIK3R3Q92569 461 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 RFT1Q96AA3 541 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 EEF2KMTQ96G04 330 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 RUNDC3BQ96NL0 473 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 ZPBPQ9BS86 351 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 RHNO1Q9BSD3 238 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 ZNF577Q9BSK1 485 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 ALKBH7Q9BT30 221 aaPredicted RBP2.69□□□□□ -1.98
CD44-234ENST00000531873 FSD1Q9BTV5 496 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 TRMT61BQ9BVS5 477 aaKnown RBP2.69□□□□□ -1.98
CD44-234ENST00000531873 XPO4Q9C0E2 1151 aaKnown RBP2.69□□□□□ -1.98
CD44-234ENST00000531873 THAP2Q9H0W7 228 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 C1orf21Q9H246 121 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 HSD3B7Q9H2F3 369 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 CPVLQ9H3G5 476 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 C6orf106Q9H6K1 298 aaPredicted RBP2.69□□□□□ -1.98
CD44-234ENST00000531873 ZDHHC6Q9H6R6 413 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 SYTL2Q9HCH5 934 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 KCNMB3Q9NPA1 279 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 CHST11Q9NPF2 352 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 MIS18AQ9NYP9 233 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 AGTPBP1Q9UPW5 1226 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 TNNQ9UQP3 1299 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 ITM2BQ9Y287 266 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 EXOC6BQ9Y2D4 811 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 MTF2Q9Y483 593 aaPredicted RBP2.69□□□□□ -1.98
CD44-234ENST00000531873 R4GN57 208 aa2.69□□□□□ -1.98
CD44-234ENST00000531873 IL16Q14005 1332 aa2.68□□□□□ -1.98
CD44-234ENST00000531873 TRBV2A0A0J9YWF9 115 aa2.68□□□□□ -1.98
CD44-234ENST00000531873 RNF103-CHMP3A0A140T963 221 aa2.68□□□□□ -1.98
CD44-234ENST00000531873 C2orf92A0A1B0GVN3 265 aa2.68□□□□□ -1.98
CD44-234ENST00000531873 TMEM129A0AVI4 362 aa2.68□□□□□ -1.98
CD44-234ENST00000531873 MAGEB16A2A368 324 aa2.68□□□□□ -1.98
CD44-234ENST00000531873 SLC15A5A6NIM6 579 aa2.68□□□□□ -1.98
CD44-234ENST00000531873 E5RGE8 158 aa2.68□□□□□ -1.98
CD44-234ENST00000531873 RNF103O00237 685 aa2.68□□□□□ -1.98
CD44-234ENST00000531873 STBD1O95210 358 aa2.68□□□□□ -1.98
CD44-234ENST00000531873 BMP15O95972 392 aa2.68□□□□□ -1.98
CD44-234ENST00000531873 RAF1P04049 648 aa2.68□□□□□ -1.98
CD44-234ENST00000531873 GPIP06744 558 aa2.68□□□□□ -1.98
CD44-234ENST00000531873 NUDT17P0C025 328 aa2.68□□□□□ -1.98
CD44-234ENST00000531873 SKILP12757 684 aa2.68□□□□□ -1.98
CD44-234ENST00000531873 CCNA2P20248 432 aa2.68□□□□□ -1.98
CD44-234ENST00000531873 CA6P23280 308 aa2.68□□□□□ -1.98
CD44-234ENST00000531873 ALDH4A1P30038 563 aa2.68□□□□□ -1.98
CD44-234ENST00000531873 SFTPDP35247 375 aa2.68□□□□□ -1.98
CD44-234ENST00000531873 ATXN3P54252 364 aaPredicted RBP2.68□□□□□ -1.98
CD44-234ENST00000531873 DVL1P1P54792 670 aaPredicted RBP2.68□□□□□ -1.98
CD44-234ENST00000531873 RPP38P78345 283 aaKnown RBP2.68□□□□□ -1.98
CD44-234ENST00000531873 CETN1Q12798 172 aa2.68□□□□□ -1.98
CD44-234ENST00000531873 GK2Q14410 553 aaPredicted RBP2.68□□□□□ -1.98
CD44-234ENST00000531873 RBM39Q14498 530 aaKnown RBP2.68□□□□□ -1.98
CD44-234ENST00000531873 OPCMLQ14982 345 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms