RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 GLYATQ6IB77 296 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 KRT80Q6KB66 452 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 CAPN13Q6MZZ7 669 aaPredicted RBP5.38□□□□□ -1.55
PCF11-205ENST00000530906 GALNT18Q6P9A2 607 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 AGTRAPQ6RW13 159 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 CYP2R1Q6VVX0 501 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 ERN2Q76MJ5 926 aaKnown RBP5.38□□□□□ -1.55
PCF11-205ENST00000530906 PARS2Q7L3T8 475 aaKnown RBP5.38□□□□□ -1.55
PCF11-205ENST00000530906 CAMKMTQ7Z624 323 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 SPRED1Q7Z699 444 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 GPR180Q86V85 440 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 THOC6Q86W42 341 aaKnown RBP5.38□□□□□ -1.55
PCF11-205ENST00000530906 CARM1Q86X55 608 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 SPPL2CQ8IUH8 684 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 RIMKLAQ8IXN7 391 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 SVOPLQ8N434 492 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 NATD1Q8N6N6 113 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 RASGEF1AQ8N9B8 481 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 TERB1Q8NA31 727 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 ZNF548Q8NEK5 533 aaPredicted RBP5.38□□□□□ -1.55
PCF11-205ENST00000530906 VPS37AQ8NEZ2 397 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 VN1R2Q8NFZ6 395 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 OR8J2Q8NGG1 315 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 DNAJB14Q8TBM8 379 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 PNPT1Q8TCS8 783 aaKnown RBP5.38□□□□□ -1.55
PCF11-205ENST00000530906 SETD7Q8WTS6 366 aaKnown RBP5.38□□□□□ -1.55
PCF11-205ENST00000530906 LRTOMTQ8WZ04 291 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 SUSD6Q92537 303 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 TFAP2CQ92754 450 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 NELL1Q92832 810 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 ESAMQ96AP7 390 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 TBC1D20Q96BZ9 403 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 SDCCAG3Q96C92 435 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 NUS1Q96E22 293 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 MTERF3Q96E29 417 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 REXO5Q96IC2 774 aaKnown RBP5.38□□□□□ -1.55
PCF11-205ENST00000530906 RNF145Q96MT1 663 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 OR52E6Q96RD3 313 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 P2RY13Q9BPV8 354 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 PCBD2Q9H0N5 130 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 IL1RL2Q9HB29 575 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 TRIM39Q9HCM9 518 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 INTS7Q9NVH2 962 aaKnown RBP5.38□□□□□ -1.55
PCF11-205ENST00000530906 SPATA6Q9NWH7 488 aaPredicted RBP5.38□□□□□ -1.55
PCF11-205ENST00000530906 STOX2Q9P2F5 926 aaPredicted RBP5.38□□□□□ -1.55
PCF11-205ENST00000530906 VPS29Q9UBQ0 182 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 ALPK3Q96L96 1907 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 DOCK6Q96HP0 2047 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 MYOFQ9NZM1 2061 aa5.38□□□□□ -1.55
PCF11-205ENST00000530906 RNF103-CHMP3A0A140T963 221 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 ARHGAP10A1A4S6 786 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 ELOVL7A1L3X0 281 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 MGAT4DA6NG13 374 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 ARHGEF33A8MVX0 844 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 FADS2P1A8MWK0 482 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 A8MX80 341 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 EIF1AYO14602 144 aaKnown RBP5.37□□□□□ -1.55
PCF11-205ENST00000530906 FFAR3O14843 346 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 CLOCKO15516 846 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 GPR42O15529 346 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 NDUFB5O43674 189 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 PI15O43692 258 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 AHCYL1O43865 530 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 DPM1O60762 260 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 TIPRLO75663 272 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 H6PDO95479 791 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 FESP07332 822 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 ABCB1P08183 1280 aaPredicted RBP5.37□□□□□ -1.55
PCF11-205ENST00000530906 GSTP1P09211 210 aaKnown RBP5.37□□□□□ -1.55
PCF11-205ENST00000530906 ADRB3P13945 408 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 ARSAP15289 507 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 AMD1P17707 334 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 SDC1P18827 310 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 MYF6P23409 242 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 MSX2P35548 267 aaPredicted RBP5.37□□□□□ -1.55
PCF11-205ENST00000530906 HPCAL1P37235 193 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 PIK3CBP42338 1070 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 GDF5P43026 501 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 PFN3P60673 137 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 NTHL1P78549 312 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 HMGCS1Q01581 520 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 FCHO2Q0JRZ9 810 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 APOFQ13790 326 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 ENPP2Q13822 863 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 PTGR1Q14914 329 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 ZNF124Q15973 351 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 DUOXA1Q1HG43 343 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 C18orf21Q32NC0 220 aaPredicted RBP5.37□□□□□ -1.55
PCF11-205ENST00000530906 XKR6Q5GH73 641 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 NHSL2Q5HYW2 709 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 FAM78AQ5JUQ0 283 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 SPANXN4Q5MJ08 99 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 HMBOX1Q6NT76 420 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 NOXRED1Q6NXP6 359 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 MED27Q6P2C8 311 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 NEK5Q6P3R8 708 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 SLC2A7Q6PXP3 512 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 TMEM220Q6QAJ8 160 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 SCIMPQ6UWF3 145 aa5.37□□□□□ -1.55
PCF11-205ENST00000530906 SERPINA13PQ6UXR4 307 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms