RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 POLE3Q9NRF9 147 aa5.87□□□□□ -1.47
CAPRIN1-208ENST00000530008 IL16Q14005 1332 aa5.87□□□□□ -1.47
CAPRIN1-208ENST00000530008 FAM205AQ6ZU69 1335 aa5.86□□□□□ -1.47
CAPRIN1-208ENST00000530008 IGHV4OR15-8A0A075B7B6 117 aa5.86□□□□□ -1.47
CAPRIN1-208ENST00000530008 LOC101059948A0A1B0GTJ6 334 aa5.86□□□□□ -1.47
CAPRIN1-208ENST00000530008 MACROD2A1Z1Q3 448 aa5.86□□□□□ -1.47
CAPRIN1-208ENST00000530008 SLC15A5A6NIM6 579 aa5.86□□□□□ -1.47
CAPRIN1-208ENST00000530008 KPNA7A9QM74 516 aa5.86□□□□□ -1.47
CAPRIN1-208ENST00000530008 ZNF197O14709 1029 aa5.86□□□□□ -1.47
CAPRIN1-208ENST00000530008 GAS8O95995 478 aa5.86□□□□□ -1.47
CAPRIN1-208ENST00000530008 IFNB1P01574 187 aa5.86□□□□□ -1.47
CAPRIN1-208ENST00000530008 IGHV4-39P01824 125 aa5.86□□□□□ -1.47
CAPRIN1-208ENST00000530008 IGHDP01880 384 aa5.86□□□□□ -1.47
CAPRIN1-208ENST00000530008 GP1BBP13224 206 aa5.86□□□□□ -1.47
CAPRIN1-208ENST00000530008 CD59P13987 128 aa5.86□□□□□ -1.47
CAPRIN1-208ENST00000530008 DAOP14920 347 aa5.86□□□□□ -1.47
CAPRIN1-208ENST00000530008 MSH3P20585 1137 aa5.86□□□□□ -1.47
CAPRIN1-208ENST00000530008 ASMTP46597 345 aa5.86□□□□□ -1.47
CAPRIN1-208ENST00000530008 TKTL1P51854 596 aa5.86□□□□□ -1.47
CAPRIN1-208ENST00000530008 MAZP56270 477 aaKnown RBP5.86□□□□□ -1.47
CAPRIN1-208ENST00000530008 HUNKP57058 714 aa5.86□□□□□ -1.47
CAPRIN1-208ENST00000530008 PITX1P78337 314 aaPredicted RBP5.86□□□□□ -1.47
CAPRIN1-208ENST00000530008 GAGE5Q13069 117 aa5.86□□□□□ -1.47
CAPRIN1-208ENST00000530008 GAGE6Q13070 117 aa5.86□□□□□ -1.47
CAPRIN1-208ENST00000530008 GK2Q14410 553 aaPredicted RBP5.86□□□□□ -1.47
CAPRIN1-208ENST00000530008 EPC2Q52LR7 807 aa5.86□□□□□ -1.47
CAPRIN1-208ENST00000530008 TAF1BQ53T94 588 aaPredicted RBP5.86□□□□□ -1.47
CAPRIN1-208ENST00000530008 PSRC1Q6PGN9 363 aaPredicted RBP5.86□□□□□ -1.47
CAPRIN1-208ENST00000530008 DLEU7Q6UYE1 221 aa5.86□□□□□ -1.47
CAPRIN1-208ENST00000530008 KCTD8Q6ZWB6 473 aa5.86□□□□□ -1.47
CAPRIN1-208ENST00000530008 CREB3L2Q70SY1 520 aa5.86□□□□□ -1.47
CAPRIN1-208ENST00000530008 SMYD1Q8NB12 490 aa5.86□□□□□ -1.47
CAPRIN1-208ENST00000530008 CCDC110Q8TBZ0 833 aa5.86□□□□□ -1.47
CAPRIN1-208ENST00000530008 ELP5Q8TE02 316 aa5.86□□□□□ -1.47
CAPRIN1-208ENST00000530008 SYAP1Q96A49 352 aaPredicted RBP5.86□□□□□ -1.47
CAPRIN1-208ENST00000530008 WWTR1Q9GZV5 400 aa5.86□□□□□ -1.47
CAPRIN1-208ENST00000530008 NUDCQ9Y266 331 aa5.86□□□□□ -1.47
CAPRIN1-208ENST00000530008 PLEKHA6Q9Y2H5 1048 aa5.86□□□□□ -1.47
CAPRIN1-208ENST00000530008 DNAJC9-AS1A6NH13 148 aa5.85□□□□□ -1.47
CAPRIN1-208ENST00000530008 CD8B2A6NJW9 211 aa5.85□□□□□ -1.47
CAPRIN1-208ENST00000530008 C2CD4DB7Z1M9 353 aa5.85□□□□□ -1.47
CAPRIN1-208ENST00000530008 E5RGE8 158 aa5.85□□□□□ -1.47
CAPRIN1-208ENST00000530008 SLC28A1O00337 649 aa5.85□□□□□ -1.47
CAPRIN1-208ENST00000530008 PSMD3O43242 534 aa5.85□□□□□ -1.47
CAPRIN1-208ENST00000530008 OR6B1O95007 311 aa5.85□□□□□ -1.47
CAPRIN1-208ENST00000530008 CXCL10P02778 98 aa5.85□□□□□ -1.47
CAPRIN1-208ENST00000530008 KRT3P12035 628 aa5.85□□□□□ -1.47
CAPRIN1-208ENST00000530008 ZNF18P17022 549 aa5.85□□□□□ -1.47
CAPRIN1-208ENST00000530008 NR1D1P20393 614 aa5.85□□□□□ -1.47
CAPRIN1-208ENST00000530008 CHRNA3P32297 505 aa5.85□□□□□ -1.47
CAPRIN1-208ENST00000530008 PDLIM4P50479 330 aa5.85□□□□□ -1.47
CAPRIN1-208ENST00000530008 INHBEP58166 350 aa5.85□□□□□ -1.47
CAPRIN1-208ENST00000530008 RPP38P78345 283 aaKnown RBP5.85□□□□□ -1.47
CAPRIN1-208ENST00000530008 SLC3A1Q07837 685 aa5.85□□□□□ -1.47
CAPRIN1-208ENST00000530008 OPCMLQ14982 345 aa5.85□□□□□ -1.47
CAPRIN1-208ENST00000530008 HERC3Q15034 1050 aa5.85□□□□□ -1.47
CAPRIN1-208ENST00000530008 KARSQ15046 597 aaKnown RBP5.85□□□□□ -1.47
CAPRIN1-208ENST00000530008 ZC2HC1CQ53FD0 456 aaPredicted RBP5.85□□□□□ -1.47
CAPRIN1-208ENST00000530008 HSP90AA5PQ58FG0 334 aa5.85□□□□□ -1.47
CAPRIN1-208ENST00000530008 XKR3Q5GH77 459 aa5.85□□□□□ -1.47
CAPRIN1-208ENST00000530008 PRAMEF7Q5VXH5 474 aa5.85□□□□□ -1.47
CAPRIN1-208ENST00000530008 TAF8Q7Z7C8 310 aa5.85□□□□□ -1.47
CAPRIN1-208ENST00000530008 CCDC60Q8IWA6 550 aaPredicted RBP5.85□□□□□ -1.47
CAPRIN1-208ENST00000530008 FBXW8Q8N3Y1 598 aa5.85□□□□□ -1.47
CAPRIN1-208ENST00000530008 PRSS35Q8N3Z0 413 aa5.85□□□□□ -1.47
CAPRIN1-208ENST00000530008 NTPCRQ9BSD7 190 aaKnown RBP5.85□□□□□ -1.47
CAPRIN1-208ENST00000530008 LRRC1Q9BTT6 524 aa5.85□□□□□ -1.47
CAPRIN1-208ENST00000530008 KRTAP9-4Q9BYQ2 154 aa5.85□□□□□ -1.47
CAPRIN1-208ENST00000530008 NACAP1Q9BZK3 213 aa5.85□□□□□ -1.47
CAPRIN1-208ENST00000530008 MTMR12Q9C0I1 747 aa5.85□□□□□ -1.47
CAPRIN1-208ENST00000530008 C5orf66Q9H5L9 145 aa5.85□□□□□ -1.47
CAPRIN1-208ENST00000530008 ZDHHC6Q9H6R6 413 aa5.85□□□□□ -1.47
CAPRIN1-208ENST00000530008 RAVER2Q9HCJ3 691 aaKnown RBP5.85□□□□□ -1.47
CAPRIN1-208ENST00000530008 PIGVQ9NUD9 493 aa5.85□□□□□ -1.47
CAPRIN1-208ENST00000530008 NSG2Q9Y328 171 aa5.85□□□□□ -1.47
CAPRIN1-208ENST00000530008 TMED7Q9Y3B3 224 aa5.85□□□□□ -1.47
CAPRIN1-208ENST00000530008 ZNF521Q96K83 1311 aa5.84□□□□□ -1.47
CAPRIN1-208ENST00000530008 IGLV5-45A0A087WSX0 123 aa5.84□□□□□ -1.47
CAPRIN1-208ENST00000530008 ANTXRLA6NF34 631 aa5.84□□□□□ -1.47
CAPRIN1-208ENST00000530008 H3BMM5 538 aa5.84□□□□□ -1.47
CAPRIN1-208ENST00000530008 NOL3O60936 208 aaKnown RBP5.84□□□□□ -1.47
CAPRIN1-208ENST00000530008 ATP6V1G1O75348 118 aa5.84□□□□□ -1.47
CAPRIN1-208ENST00000530008 RAF1P04049 648 aa5.84□□□□□ -1.47
CAPRIN1-208ENST00000530008 PGK2P07205 417 aa5.84□□□□□ -1.47
CAPRIN1-208ENST00000530008 IGHV4-31P0DP07 118 aa5.84□□□□□ -1.47
CAPRIN1-208ENST00000530008 EFNA1P20827 205 aaPredicted RBP5.84□□□□□ -1.47
CAPRIN1-208ENST00000530008 CETN2P41208 172 aa5.84□□□□□ -1.47
CAPRIN1-208ENST00000530008 NR0B1P51843 470 aaKnown RBP5.84□□□□□ -1.47
CAPRIN1-208ENST00000530008 SLC26A5P58743 744 aa5.84□□□□□ -1.47
CAPRIN1-208ENST00000530008 GPR33Q49SQ1 333 aa5.84□□□□□ -1.47
CAPRIN1-208ENST00000530008 ZNF542PQ5EBM4 170 aa5.84□□□□□ -1.47
CAPRIN1-208ENST00000530008 ARMCX4Q5H9R4 360 aa5.84□□□□□ -1.47
CAPRIN1-208ENST00000530008 CD164L2Q6UWJ8 174 aa5.84□□□□□ -1.47
CAPRIN1-208ENST00000530008 OLFM4Q6UX06 510 aa5.84□□□□□ -1.47
CAPRIN1-208ENST00000530008 MARK2Q7KZI7 788 aaKnown RBP5.84□□□□□ -1.47
CAPRIN1-208ENST00000530008 STHQ8IWL8 128 aa5.84□□□□□ -1.47
CAPRIN1-208ENST00000530008 LRTM2Q8N967 370 aa5.84□□□□□ -1.47
CAPRIN1-208ENST00000530008 SIDT2Q8NBJ9 832 aaKnown RBP5.84□□□□□ -1.47
CAPRIN1-208ENST00000530008 ZNF540Q8NDQ6 660 aa5.84□□□□□ -1.47
CAPRIN1-208ENST00000530008 OR4A16Q8NH70 328 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms