RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 NAP1L1P55209 391 aaKnown RBP9.83□□□□□ -0.84
COPB1-207ENST00000529866 MAT1AQ00266 395 aaKnown RBP9.83□□□□□ -0.84
COPB1-207ENST00000529866 PTK6Q13882 451 aa9.83□□□□□ -0.84
COPB1-207ENST00000529866 PARP6Q2NL67 630 aa9.83□□□□□ -0.84
COPB1-207ENST00000529866 P3H1Q32P28 736 aa9.83□□□□□ -0.84
COPB1-207ENST00000529866 FBXO42Q6P3S6 717 aa9.83□□□□□ -0.84
COPB1-207ENST00000529866 LANCL3Q6ZV70 420 aa9.83□□□□□ -0.84
COPB1-207ENST00000529866 SLC35B2Q8TB61 432 aa9.83□□□□□ -0.84
COPB1-207ENST00000529866 LKAAEAR1Q8TD35 194 aa9.83□□□□□ -0.84
COPB1-207ENST00000529866 ATG4AQ8WYN0 398 aa9.83□□□□□ -0.84
COPB1-207ENST00000529866 HDAC10Q969S8 669 aa9.83□□□□□ -0.84
COPB1-207ENST00000529866 TMEM125Q96AQ2 219 aa9.83□□□□□ -0.84
COPB1-207ENST00000529866 RMND5BQ96G75 393 aaPredicted RBP9.83□□□□□ -0.84
COPB1-207ENST00000529866 ALPK1Q96QP1 1244 aa9.83□□□□□ -0.84
COPB1-207ENST00000529866 CYTH2Q99418 400 aa9.83□□□□□ -0.84
COPB1-207ENST00000529866 GSX1Q9H4S2 264 aaPredicted RBP9.83□□□□□ -0.84
COPB1-207ENST00000529866 DLL4Q9NR61 685 aa9.83□□□□□ -0.84
COPB1-207ENST00000529866 RNF6Q9Y252 685 aa9.83□□□□□ -0.84
COPB1-207ENST00000529866 CSPG4Q6UVK1 2322 aa9.83□□□□□ -0.84
COPB1-207ENST00000529866 FAM237BA0A1B0GVD1 139 aa9.82□□□□□ -0.84
COPB1-207ENST00000529866 A0A1W2PPV9 198 aa9.82□□□□□ -0.84
COPB1-207ENST00000529866 IQCF5A8MTL0 148 aa9.82□□□□□ -0.84
COPB1-207ENST00000529866 PRMT5O14744 637 aaPredicted RBP9.82□□□□□ -0.84
COPB1-207ENST00000529866 NDC80O14777 642 aa9.82□□□□□ -0.84
COPB1-207ENST00000529866 KPNA5O15131 536 aa9.82□□□□□ -0.84
COPB1-207ENST00000529866 PSMD3O43242 534 aa9.82□□□□□ -0.84
COPB1-207ENST00000529866 ZNHIT1O43257 154 aa9.82□□□□□ -0.84
COPB1-207ENST00000529866 CDC40O60508 579 aaKnown RBP eCLIP9.82□□□□□ -0.84
COPB1-207ENST00000529866 PRMT3O60678 531 aa9.82□□□□□ -0.84
COPB1-207ENST00000529866 TJP3O95049 919 aa9.82□□□□□ -0.84
COPB1-207ENST00000529866 GOT2P00505 430 aaKnown RBP9.82□□□□□ -0.84
COPB1-207ENST00000529866 PTGER1P34995 402 aa9.82□□□□□ -0.84
COPB1-207ENST00000529866 RPA3P35244 121 aaPredicted RBP9.82□□□□□ -0.84
COPB1-207ENST00000529866 CYB561P49447 251 aa9.82□□□□□ -0.84
COPB1-207ENST00000529866 EFNA3P52797 238 aa9.82□□□□□ -0.84
COPB1-207ENST00000529866 PRAMEP78395 509 aa9.82□□□□□ -0.84
COPB1-207ENST00000529866 LTBQ06643 244 aa9.82□□□□□ -0.84
COPB1-207ENST00000529866 KCTD19Q17RG1 926 aaPredicted RBP9.82□□□□□ -0.84
COPB1-207ENST00000529866 FASTKD1Q53R41 847 aaKnown RBP9.82□□□□□ -0.84
COPB1-207ENST00000529866 PTRHD1Q6GMV3 140 aaKnown RBP9.82□□□□□ -0.84
COPB1-207ENST00000529866 ARHGAP11AQ6P4F7 1023 aa9.82□□□□□ -0.84
COPB1-207ENST00000529866 PAPD4Q6PIY7 484 aaKnown RBP9.82□□□□□ -0.84
COPB1-207ENST00000529866 ACAD11Q709F0 780 aa9.82□□□□□ -0.84
COPB1-207ENST00000529866 OTOAQ7RTW8 1153 aa9.82□□□□□ -0.84
COPB1-207ENST00000529866 ADCK2Q7Z695 626 aa9.82□□□□□ -0.84
COPB1-207ENST00000529866 FGD2Q7Z6J4 655 aa9.82□□□□□ -0.84
COPB1-207ENST00000529866 ANKRD37Q7Z713 158 aa9.82□□□□□ -0.84
COPB1-207ENST00000529866 PRUNE1Q86TP1 453 aa9.82□□□□□ -0.84
COPB1-207ENST00000529866 LINC00523Q86TU6 105 aa9.82□□□□□ -0.84
COPB1-207ENST00000529866 BIVMQ86UB2 503 aa9.82□□□□□ -0.84
COPB1-207ENST00000529866 PAQR7Q86WK9 346 aa9.82□□□□□ -0.84
COPB1-207ENST00000529866 MARVELD2Q8N4S9 558 aa9.82□□□□□ -0.84
COPB1-207ENST00000529866 CPSF7Q8N684 471 aaKnown RBP9.82□□□□□ -0.84
COPB1-207ENST00000529866 OR13J1Q8NGT2 312 aa9.82□□□□□ -0.84
COPB1-207ENST00000529866 OR4L1Q8NH43 312 aa9.82□□□□□ -0.84
COPB1-207ENST00000529866 SMPDL3AQ92484 453 aa9.82□□□□□ -0.84
COPB1-207ENST00000529866 OR2A5Q96R48 311 aa9.82□□□□□ -0.84
COPB1-207ENST00000529866 LPAR4Q99677 370 aa9.82□□□□□ -0.84
COPB1-207ENST00000529866 POLDIP3Q9BY77 421 aaKnown RBP9.82□□□□□ -0.84
COPB1-207ENST00000529866 UCK2Q9BZX2 261 aa9.82□□□□□ -0.84
COPB1-207ENST00000529866 ST6GALNAC2Q9UJ37 374 aa9.82□□□□□ -0.84
COPB1-207ENST00000529866 ANAPC5Q9UJX4 755 aa9.82□□□□□ -0.84
COPB1-207ENST00000529866 KLF13Q9Y2Y9 288 aaPredicted RBP9.82□□□□□ -0.84
COPB1-207ENST00000529866 A0A1B0GTH9 108 aa9.81□□□□□ -0.84
COPB1-207ENST00000529866 ZNF839A8K0R7 811 aa9.81□□□□□ -0.84
COPB1-207ENST00000529866 NSA2O95478 260 aaKnown RBP9.81□□□□□ -0.84
COPB1-207ENST00000529866 GRIA1P42261 906 aa9.81□□□□□ -0.84
COPB1-207ENST00000529866 XCR1P46094 333 aa9.81□□□□□ -0.84
COPB1-207ENST00000529866 ST13P50502 369 aaKnown RBP9.81□□□□□ -0.84
COPB1-207ENST00000529866 DGKQP52824 942 aa9.81□□□□□ -0.84
COPB1-207ENST00000529866 ACTN3Q08043 901 aaPredicted RBP9.81□□□□□ -0.84
COPB1-207ENST00000529866 TSTA3Q13630 321 aaPredicted RBP9.81□□□□□ -0.84
COPB1-207ENST00000529866 CCDC38Q502W7 563 aa9.81□□□□□ -0.84
COPB1-207ENST00000529866 RNFT1Q5M7Z0 435 aa9.81□□□□□ -0.84
COPB1-207ENST00000529866 PEX26Q7Z412 305 aa9.81□□□□□ -0.84
COPB1-207ENST00000529866 KIAA1328Q86T90 577 aa9.81□□□□□ -0.84
COPB1-207ENST00000529866 KRT222Q8N1A0 295 aa9.81□□□□□ -0.84
COPB1-207ENST00000529866 ARHGEF39Q8N4T4 335 aa9.81□□□□□ -0.84
COPB1-207ENST00000529866 AMER2Q8N7J2 671 aa9.81□□□□□ -0.84
COPB1-207ENST00000529866 OR6P1Q8NGX9 317 aa9.81□□□□□ -0.84
COPB1-207ENST00000529866 OR51Q1Q8NH59 317 aa9.81□□□□□ -0.84
COPB1-207ENST00000529866 HES6Q96HZ4 224 aa9.81□□□□□ -0.84
COPB1-207ENST00000529866 NPAS2Q99743 824 aa9.81□□□□□ -0.84
COPB1-207ENST00000529866 BAG1Q99933 345 aaPredicted RBP9.81□□□□□ -0.84
COPB1-207ENST00000529866 CLEC4MQ9H2X3 399 aaPredicted RBP9.81□□□□□ -0.84
COPB1-207ENST00000529866 PCYOX1Q9UHG3 505 aa9.81□□□□□ -0.84
COPB1-207ENST00000529866 AMFRQ9UKV5 643 aa9.81□□□□□ -0.84
COPB1-207ENST00000529866 RIMKLBQ9ULI2 386 aa9.81□□□□□ -0.84
COPB1-207ENST00000529866 RPH3AQ9Y2J0 694 aaPredicted RBP9.81□□□□□ -0.84
COPB1-207ENST00000529866 NFS1Q9Y697 457 aa9.81□□□□□ -0.84
COPB1-207ENST00000529866 CPAMD8Q8IZJ3 1885 aa9.81□□□□□ -0.84
COPB1-207ENST00000529866 KRT87PA6NCN2 255 aa9.8□□□□□ -0.84
COPB1-207ENST00000529866 KLRC4-KLRK1H3BQV0 150 aa9.8□□□□□ -0.84
COPB1-207ENST00000529866 KLK8O60259 260 aa9.8□□□□□ -0.84
COPB1-207ENST00000529866 MAN1A2O60476 641 aa9.8□□□□□ -0.84
COPB1-207ENST00000529866 CTAG2O75638 210 aa9.8□□□□□ -0.84
COPB1-207ENST00000529866 ETS1P14921 441 aa9.8□□□□□ -0.84
COPB1-207ENST00000529866 TFEBP19484 476 aa9.8□□□□□ -0.84
COPB1-207ENST00000529866 HSD17B2P37059 387 aa9.8□□□□□ -0.84
COPB1-207ENST00000529866 CETN2P41208 172 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms