RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 TPT1P8Q9HAU6 139 aa14.57□□□□□ -0.08
USP47-207ENST00000527733 PNPLA3Q9NST1 481 aa14.57□□□□□ -0.08
USP47-207ENST00000527733 THAP10Q9P2Z0 257 aaPredicted RBP14.57□□□□□ -0.08
USP47-207ENST00000527733 ARFGEF1Q9Y6D6 1849 aa14.57□□□□□ -0.08
USP47-207ENST00000527733 NUAK1O60285 661 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 MGRN1O60291 552 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 C1SP09871 688 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 CD247P20963 164 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 GCAP28676 217 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 GSTM5P46439 218 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 CTSCP53634 463 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 MCCD1P59942 119 aaPredicted RBP14.56□□□□□ -0.08
USP47-207ENST00000527733 ABHD18Q0P651 414 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 GRIK2Q13002 908 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 ABRAXAS2Q15018 415 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 FAM214AQ32MH5 1076 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 NEK5Q6P3R8 708 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 SLC36A4Q6YBV0 504 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 ZNF765Q7L2R6 523 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 ZNF248Q8NDW4 579 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 OR5AK3PQ8NH89 298 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 TRAPPC9Q96Q05 1148 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 REEP4Q9H6H4 257 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 APBB3O95704 486 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 EIF2DP41214 584 aaKnown RBP14.56□□□□□ -0.08
USP47-207ENST00000527733 CXCL12P48061 93 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 NEK10Q6ZWH5 1172 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 TMC8Q8IU68 726 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 KDM1BQ8NB78 822 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 LRTOMTQ8WZ04 291 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 TOE1Q96GM8 510 aaKnown RBP14.56□□□□□ -0.08
USP47-207ENST00000527733 HHIPQ96QV1 700 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 PKP4Q99569 1192 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 BCKDHAP12694 445 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 CASP9P55211 416 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 SCARB2Q14108 478 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 DCST1Q5T197 706 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 METTL2BQ6P1Q9 378 aaKnown RBP14.56□□□□□ -0.08
USP47-207ENST00000527733 PARM1Q6UWI2 310 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 FAM92BQ6ZTR7 304 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 TREML1Q86YW5 311 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 CBR4Q8N4T8 237 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 ELSPBP1Q96BH3 223 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 AXIN1O15169 862 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 HTRA2O43464 458 aaPredicted RBP14.56□□□□□ -0.08
USP47-207ENST00000527733 AGR2O95994 175 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 AGXTP21549 392 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 SLC7A1P30825 629 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 TIA1P31483 386 aaKnown RBP eCLIP14.56□□□□□ -0.089e-7■■■■□ 22.4
USP47-207ENST00000527733 CSTF2P33240 577 aaKnown RBP eCLIP14.56□□□□□ -0.08
USP47-207ENST00000527733 ST13P50502 369 aaKnown RBP14.56□□□□□ -0.08
USP47-207ENST00000527733 SLC5A9Q2M3M2 681 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 TMEM164Q5U3C3 297 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 CD300LGQ6UXG3 332 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 VN1R5Q7Z5H4 357 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 IL21RQ9HBE5 538 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 RDH14Q9HBH5 336 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 AIG1Q9NVV5 245 aa14.56□□□□□ -0.08
USP47-207ENST00000527733 MTHFD1P11586 935 aaKnown RBP14.55□□□□□ -0.08
USP47-207ENST00000527733 IGFBP5P24593 272 aa14.55□□□□□ -0.08
USP47-207ENST00000527733 CCR7P32248 378 aa14.55□□□□□ -0.08
USP47-207ENST00000527733 RYKP34925 604 aa14.55□□□□□ -0.08
USP47-207ENST00000527733 SOX6P35712 828 aa14.55□□□□□ -0.08
USP47-207ENST00000527733 P2RY2P41231 377 aa14.55□□□□□ -0.08
USP47-207ENST00000527733 AP1ARQ63HQ0 302 aa14.55□□□□□ -0.08
USP47-207ENST00000527733 ASPGQ86U10 573 aa14.55□□□□□ -0.08
USP47-207ENST00000527733 EPHX4Q8IUS5 362 aa14.55□□□□□ -0.08
USP47-207ENST00000527733 TSPAN14Q8NG11 270 aa14.55□□□□□ -0.08
USP47-207ENST00000527733 ARRDC3Q96B67 414 aa14.55□□□□□ -0.08
USP47-207ENST00000527733 LYARQ9NX58 379 aaKnown RBP14.55□□□□□ -0.08
USP47-207ENST00000527733 C9J4A7 227 aa14.55□□□□□ -0.08
USP47-207ENST00000527733 hCG_2039718K7EN88 272 aa14.55□□□□□ -0.08
USP47-207ENST00000527733 RGS5O15539 181 aa14.55□□□□□ -0.08
USP47-207ENST00000527733 PRLP01236 227 aa14.55□□□□□ -0.08
USP47-207ENST00000527733 ALOX5P09917 674 aa14.55□□□□□ -0.08
USP47-207ENST00000527733 NR2F6P10588 404 aa14.55□□□□□ -0.08
USP47-207ENST00000527733 TPP2P29144 1249 aaPredicted RBP14.55□□□□□ -0.08
USP47-207ENST00000527733 CTHP32929 405 aa14.55□□□□□ -0.08
USP47-207ENST00000527733 PXNP49023 591 aaPredicted RBP14.55□□□□□ -0.08
USP47-207ENST00000527733 DUSP3P51452 185 aaPredicted RBP14.55□□□□□ -0.08
USP47-207ENST00000527733 ERVPABLB-1P60509 514 aa14.55□□□□□ -0.08
USP47-207ENST00000527733 LRP8Q14114 963 aa14.55□□□□□ -0.08
USP47-207ENST00000527733 Q6ZSR6 202 aa14.55□□□□□ -0.08
USP47-207ENST00000527733 OR52J3Q8NH60 311 aa14.55□□□□□ -0.08
USP47-207ENST00000527733 JPH3Q8WXH2 748 aaPredicted RBP14.55□□□□□ -0.08
USP47-207ENST00000527733 MS4A12Q9NXJ0 267 aa14.55□□□□□ -0.08
USP47-207ENST00000527733 P2RX2Q9UBL9 471 aa14.55□□□□□ -0.08
USP47-207ENST00000527733 ARPC2O15144 300 aa14.55□□□□□ -0.08
USP47-207ENST00000527733 CYP4B1P13584 511 aa14.55□□□□□ -0.08
USP47-207ENST00000527733 CLDN2P57739 230 aa14.55□□□□□ -0.08
USP47-207ENST00000527733 UAP1L1Q3KQV9 507 aa14.55□□□□□ -0.08
USP47-207ENST00000527733 CDC73Q6P1J9 531 aa14.55□□□□□ -0.08
USP47-207ENST00000527733 RANBP3LQ86VV4 465 aaPredicted RBP14.55□□□□□ -0.08
USP47-207ENST00000527733 DDHD1Q8NEL9 900 aa14.55□□□□□ -0.08
USP47-207ENST00000527733 DGAT2Q96PD7 388 aa14.55□□□□□ -0.08
USP47-207ENST00000527733 CLEC4EQ9ULY5 219 aa14.55□□□□□ -0.08
USP47-207ENST00000527733 PRSS21Q9Y6M0 314 aa14.55□□□□□ -0.08
USP47-207ENST00000527733 LTBP1Q14766 1721 aa14.55□□□□□ -0.08
USP47-207ENST00000527733 FADS2P1A8MWK0 482 aa14.54□□□□□ -0.08
USP47-207ENST00000527733 CHURC1-FNTBB4DL54 471 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms