RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 FCF1Q9Y324 198 aaKnown RBP12.11□□□□□ -0.47
CAPN1-208ENST00000527323 MYO16Q9Y6X6 1858 aa12.11□□□□□ -0.47
CAPN1-208ENST00000527323 LAMA1P25391 3075 aa12.11□□□□□ -0.47
CAPN1-208ENST00000527323 PABPN1LA6NDY0 278 aaKnown RBP12.1□□□□□ -0.47
CAPN1-208ENST00000527323 TAF4O00268 1085 aa12.1□□□□□ -0.47
CAPN1-208ENST00000527323 KCNK2O95069 426 aa12.1□□□□□ -0.47
CAPN1-208ENST00000527323 MED26O95402 600 aa12.1□□□□□ -0.47
CAPN1-208ENST00000527323 SDC1P18827 310 aa12.1□□□□□ -0.47
CAPN1-208ENST00000527323 HMGCLP35914 325 aa12.1□□□□□ -0.47
CAPN1-208ENST00000527323 SOWAHCQ53LP3 525 aaPredicted RBP12.1□□□□□ -0.47
CAPN1-208ENST00000527323 INO80DQ53TQ3 878 aaPredicted RBP12.1□□□□□ -0.47
CAPN1-208ENST00000527323 NCEH1Q6PIU2 408 aa12.1□□□□□ -0.47
CAPN1-208ENST00000527323 USP43Q70EL4 1123 aa12.1□□□□□ -0.47
CAPN1-208ENST00000527323 C12orf76Q8N812 135 aaPredicted RBP12.1□□□□□ -0.47
CAPN1-208ENST00000527323 MYDGFQ969H8 173 aa12.1□□□□□ -0.47
CAPN1-208ENST00000527323 TXNDC15Q96J42 360 aa12.1□□□□□ -0.47
CAPN1-208ENST00000527323 SPOCK3Q9BQ16 436 aa12.1□□□□□ -0.47
CAPN1-208ENST00000527323 CHCHD6Q9BRQ6 235 aa12.1□□□□□ -0.47
CAPN1-208ENST00000527323 RNF38Q9H0F5 515 aa12.1□□□□□ -0.47
CAPN1-208ENST00000527323 RNF167Q9H6Y7 350 aa12.1□□□□□ -0.47
CAPN1-208ENST00000527323 ELAC1Q9H777 363 aaKnown RBP12.1□□□□□ -0.47
CAPN1-208ENST00000527323 ASIC5Q9NY37 505 aa12.1□□□□□ -0.47
CAPN1-208ENST00000527323 ANKRD36A6QL64 1941 aa12.1□□□□□ -0.47
CAPN1-208ENST00000527323 H3BNC9 293 aa12.1□□□□□ -0.47
CAPN1-208ENST00000527323 CCL16O15467 120 aa12.1□□□□□ -0.47
CAPN1-208ENST00000527323 CXCL14O95715 111 aa12.1□□□□□ -0.47
CAPN1-208ENST00000527323 APOA1P02647 267 aa12.1□□□□□ -0.47
CAPN1-208ENST00000527323 DNTTP04053 509 aa12.1□□□□□ -0.47
CAPN1-208ENST00000527323 KRT8P05787 483 aa12.1□□□□□ -0.47
CAPN1-208ENST00000527323 CA3P07451 260 aa12.1□□□□□ -0.47
CAPN1-208ENST00000527323 MAPK1P28482 360 aa12.1□□□□□ -0.47
CAPN1-208ENST00000527323 NTHL1P78549 312 aa12.1□□□□□ -0.47
CAPN1-208ENST00000527323 UBE2UQ5VVX9 321 aa12.1□□□□□ -0.47
CAPN1-208ENST00000527323 CCBE1Q6UXH8 406 aaPredicted RBP12.1□□□□□ -0.47
CAPN1-208ENST00000527323 SYT12Q8IV01 421 aa12.1□□□□□ -0.47
CAPN1-208ENST00000527323 FAM9CQ8IZT9 166 aa12.1□□□□□ -0.47
CAPN1-208ENST00000527323 STX19Q8N4C7 294 aa12.1□□□□□ -0.47
CAPN1-208ENST00000527323 ATL1Q8WXF7 558 aa12.1□□□□□ -0.47
CAPN1-208ENST00000527323 FCGR1BQ92637 280 aa12.1□□□□□ -0.47
CAPN1-208ENST00000527323 TCF25Q9BQ70 676 aa12.1□□□□□ -0.47
CAPN1-208ENST00000527323 SLC29A3Q9BZD2 475 aa12.1□□□□□ -0.47
CAPN1-208ENST00000527323 ZFYVE1Q9HBF4 777 aa12.1□□□□□ -0.47
CAPN1-208ENST00000527323 IFT52Q9Y366 437 aa12.1□□□□□ -0.47
CAPN1-208ENST00000527323 TESMINQ9Y4I5 508 aa12.1□□□□□ -0.47
CAPN1-208ENST00000527323 MRPS14O60783 128 aaKnown RBP12.09□□□□□ -0.47
CAPN1-208ENST00000527323 CCNKO75909 580 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 KCNK5O95279 499 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 RPLP0P05388 317 aaKnown RBP12.09□□□□□ -0.47
CAPN1-208ENST00000527323 PTPN6P29350 595 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 CORO1AP31146 461 aaKnown RBP12.09□□□□□ -0.47
CAPN1-208ENST00000527323 COPZ1P61923 177 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 CSNK2BP67870 215 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 ARF5P84085 180 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 DUOXA1Q1HG43 343 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 LRIT3Q3SXY7 679 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 TTLL9Q3SXZ7 439 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 TUBA3EQ6PEY2 450 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 SERPINA11Q86U17 422 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 PARP16Q8N5Y8 322 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 SPPL2AQ8TCT8 520 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 UTP15Q8TED0 518 aaKnown RBP12.09□□□□□ -0.47
CAPN1-208ENST00000527323 MYLIPQ8WY64 445 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 MRPL9Q9BYD2 267 aaKnown RBP12.09□□□□□ -0.47
CAPN1-208ENST00000527323 ROGDIQ9GZN7 287 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 SLC32A1Q9H598 525 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 MARCH7Q9H992 704 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 KLHL3Q9UH77 587 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 F5P12259 2224 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 ABHD14A-ACY1A0A1B0GW23 586 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 M0R082 166 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 C9P02748 559 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 URODP06132 367 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 COX7A2P14406 83 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 DEFA1P59665 94 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 DEFA3P59666 94 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 SEMG2Q02383 582 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 GPR17Q13304 367 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 NFATC2Q13469 925 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 EIF3MQ7L2H7 374 aaKnown RBP12.09□□□□□ -0.47
CAPN1-208ENST00000527323 NANOGNBQ7Z5D8 188 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 ZZZ3Q8IYH5 903 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 ADGRG2Q8IZP9 1017 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 TBC1D20Q96BZ9 403 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 HOXD1Q9GZZ0 328 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 OR51E2Q9H255 320 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 IL23AQ9NPF7 189 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 SPG21Q9NZD8 308 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 SNX8Q9Y5X2 465 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 A0A1B0GVM2 712 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 MAGEB17A8MXT2 336 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 DYRK3O43781 588 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 CLDN7O95471 211 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 BMP1P13497 986 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 RRM2P31350 389 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 UGT2B10P36537 528 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 DDX39BQ13838 428 aaKnown RBP12.09□□□□□ -0.47
CAPN1-208ENST00000527323 CHRNA6Q15825 494 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.09□□□□□ -0.47
CAPN1-208ENST00000527323 ANGPTL8Q6UXH0 198 aa12.09□□□□□ -0.47
CAPN1-208ENST00000527323 ANKS3Q6ZW76 656 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms