RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 STRADBQ9C0K7 418 aa1.76□□□□□ -2.13
ECHDC1-219ENST00000526299 OSGEPL1Q9H4B0 414 aa1.76□□□□□ -2.13
ECHDC1-219ENST00000526299 MOB1AQ9H8S9 216 aa1.76□□□□□ -2.13
ECHDC1-219ENST00000526299 EQTNQ9NQ60 294 aa1.76□□□□□ -2.13
ECHDC1-219ENST00000526299 PLSCR3Q9NRY6 295 aa1.76□□□□□ -2.13
ECHDC1-219ENST00000526299 DHRS4-AS1Q9P1J3 65 aa1.76□□□□□ -2.13
ECHDC1-219ENST00000526299 KLK11Q9UBX7 282 aa1.76□□□□□ -2.13
ECHDC1-219ENST00000526299 ABT1Q9ULW3 272 aaKnown RBP1.76□□□□□ -2.13
ECHDC1-219ENST00000526299 TMEM98Q9Y2Y6 226 aa1.76□□□□□ -2.13
ECHDC1-219ENST00000526299 RSPH10B2B2RC85 870 aa1.75□□□□□ -2.13
ECHDC1-219ENST00000526299 B4DLN1 442 aa1.75□□□□□ -2.13
ECHDC1-219ENST00000526299 K7EQG2 157 aa1.75□□□□□ -2.13
ECHDC1-219ENST00000526299 SLC33A1O00400 549 aaPredicted RBP1.75□□□□□ -2.13
ECHDC1-219ENST00000526299 IPO8O15397 1037 aaKnown RBP1.75□□□□□ -2.13
ECHDC1-219ENST00000526299 TOMM70O94826 608 aa1.75□□□□□ -2.13
ECHDC1-219ENST00000526299 RSPH10BP0C881 870 aa1.75□□□□□ -2.13
ECHDC1-219ENST00000526299 SLC1A4P43007 532 aa1.75□□□□□ -2.13
ECHDC1-219ENST00000526299 MATR3P43243 847 aaKnown RBP eCLIP1.75□□□□□ -2.13
ECHDC1-219ENST00000526299 ZNF133P52736 654 aaPredicted RBP1.75□□□□□ -2.13
ECHDC1-219ENST00000526299 MRPL12P52815 198 aaKnown RBP1.75□□□□□ -2.13
ECHDC1-219ENST00000526299 ZRSR2Q15696 482 aaKnown RBP1.75□□□□□ -2.13
ECHDC1-219ENST00000526299 FAM106AQ4KMX7 169 aa1.75□□□□□ -2.13
ECHDC1-219ENST00000526299 FGD3Q5JSP0 725 aa1.75□□□□□ -2.13
ECHDC1-219ENST00000526299 CELF3Q5SZQ8 465 aaKnown RBP1.75□□□□□ -2.13
ECHDC1-219ENST00000526299 OR4C11Q6IEV9 310 aa1.75□□□□□ -2.13
ECHDC1-219ENST00000526299 CTR9Q6PD62 1173 aa1.75□□□□□ -2.13
ECHDC1-219ENST00000526299 LRRC49Q8IUZ0 686 aa1.75□□□□□ -2.13
ECHDC1-219ENST00000526299 RCOR2Q8IZ40 523 aa1.75□□□□□ -2.13
ECHDC1-219ENST00000526299 GBP7Q8N8V2 638 aaPredicted RBP1.75□□□□□ -2.13
ECHDC1-219ENST00000526299 UCMAQ8WVF2 138 aa1.75□□□□□ -2.13
ECHDC1-219ENST00000526299 SLC22A18Q96BI1 424 aa1.75□□□□□ -2.13
ECHDC1-219ENST00000526299 KLHL5Q96PQ7 755 aa1.75□□□□□ -2.13
ECHDC1-219ENST00000526299 Q9H8V8 135 aa1.75□□□□□ -2.13
ECHDC1-219ENST00000526299 MYNNQ9NPC7 610 aa1.75□□□□□ -2.13
ECHDC1-219ENST00000526299 ZNF275Q9NSD4 429 aaPredicted RBP1.75□□□□□ -2.13
ECHDC1-219ENST00000526299 TBC1D13Q9NVG8 400 aa1.75□□□□□ -2.13
ECHDC1-219ENST00000526299 AASSQ9UDR5 926 aa1.75□□□□□ -2.13
ECHDC1-219ENST00000526299 PILRAQ9UKJ1 303 aa1.75□□□□□ -2.13
ECHDC1-219ENST00000526299 HMCN1Q96RW7 5635 aa1.75□□□□□ -2.13
ECHDC1-219ENST00000526299 NEDD4P46934 1319 aa1.74□□□□□ -2.13
ECHDC1-219ENST00000526299 NPHP3Q7Z494 1330 aa1.74□□□□□ -2.13
ECHDC1-219ENST00000526299 SALL1Q9NSC2 1324 aa1.74□□□□□ -2.13
ECHDC1-219ENST00000526299 OR2A25A4D2G3 310 aa1.74□□□□□ -2.13
ECHDC1-219ENST00000526299 PTGES3LE9PB15 166 aa1.74□□□□□ -2.13
ECHDC1-219ENST00000526299 CCL24O00175 119 aa1.74□□□□□ -2.13
ECHDC1-219ENST00000526299 RNF103O00237 685 aa1.74□□□□□ -2.13
ECHDC1-219ENST00000526299 BAIAP3O94812 1187 aa1.74□□□□□ -2.13
ECHDC1-219ENST00000526299 SEMA4FO95754 770 aa1.74□□□□□ -2.13
ECHDC1-219ENST00000526299 BAG3O95817 575 aa1.74□□□□□ -2.13
ECHDC1-219ENST00000526299 GPX3P22352 226 aa1.74□□□□□ -2.13
ECHDC1-219ENST00000526299 HADHAP40939 763 aa1.74□□□□□ -2.13
ECHDC1-219ENST00000526299 SLC15A1P46059 708 aa1.74□□□□□ -2.13
ECHDC1-219ENST00000526299 KRT32Q14532 448 aa1.74□□□□□ -2.13
ECHDC1-219ENST00000526299 MLF2Q15773 248 aaPredicted RBP1.74□□□□□ -2.13
ECHDC1-219ENST00000526299 CYB5D1Q6P9G0 228 aa1.74□□□□□ -2.13
ECHDC1-219ENST00000526299 CARM1Q86X55 608 aa1.74□□□□□ -2.13
ECHDC1-219ENST00000526299 ZNF595Q8IYB9 648 aa1.74□□□□□ -2.13
ECHDC1-219ENST00000526299 TTC39CQ8N584 583 aa1.74□□□□□ -2.13
ECHDC1-219ENST00000526299 MCUQ8NE86 351 aa1.74□□□□□ -2.13
ECHDC1-219ENST00000526299 OR9Q2Q8NGE9 314 aa1.74□□□□□ -2.13
ECHDC1-219ENST00000526299 SPACA9Q96E40 222 aaPredicted RBP1.74□□□□□ -2.13
ECHDC1-219ENST00000526299 BTBD9Q96Q07 612 aa1.74□□□□□ -2.13
ECHDC1-219ENST00000526299 SEPHS2Q99611 448 aa1.74□□□□□ -2.13
ECHDC1-219ENST00000526299 PI4K2AQ9BTU6 479 aa1.74□□□□□ -2.13
ECHDC1-219ENST00000526299 EIF2B3Q9NR50 452 aaKnown RBP1.74□□□□□ -2.13
ECHDC1-219ENST00000526299 PSD3Q9NYI0 1048 aa1.74□□□□□ -2.13
ECHDC1-219ENST00000526299 MYH14Q7Z406 1995 aaKnown RBP1.73□□□□□ -2.13
ECHDC1-219ENST00000526299 A0A087WZ39 114 aa1.73□□□□□ -2.13
ECHDC1-219ENST00000526299 hCG_38984A0A1B0GV85 526 aa1.73□□□□□ -2.13
ECHDC1-219ENST00000526299 MTMR11A4FU01 709 aa1.73□□□□□ -2.13
ECHDC1-219ENST00000526299 CASTOR2A6NHX0 329 aa1.73□□□□□ -2.13
ECHDC1-219ENST00000526299 C2CD4DB7Z1M9 353 aa1.73□□□□□ -2.13
ECHDC1-219ENST00000526299 CTDSP2O14595 271 aa1.73□□□□□ -2.13
ECHDC1-219ENST00000526299 MAGEB2O15479 319 aa1.73□□□□□ -2.13
ECHDC1-219ENST00000526299 ZNF253O75346 499 aa1.73□□□□□ -2.13
ECHDC1-219ENST00000526299 CD1DP15813 335 aa1.73□□□□□ -2.13
ECHDC1-219ENST00000526299 TRIM21P19474 475 aaKnown RBP1.73□□□□□ -2.13
ECHDC1-219ENST00000526299 GIFP27352 417 aa1.73□□□□□ -2.13
ECHDC1-219ENST00000526299 IST1P53990 364 aa1.73□□□□□ -2.13
ECHDC1-219ENST00000526299 OR1D5P58170 312 aa1.73□□□□□ -2.13
ECHDC1-219ENST00000526299 NAAAQ02083 359 aa1.73□□□□□ -2.13
ECHDC1-219ENST00000526299 CKAP4Q07065 602 aaKnown RBP1.73□□□□□ -2.13
ECHDC1-219ENST00000526299 AIMP2Q13155 320 aaKnown RBP1.73□□□□□ -2.13
ECHDC1-219ENST00000526299 DHX8Q14562 1220 aaKnown RBP1.73□□□□□ -2.13
ECHDC1-219ENST00000526299 LRTM2Q8N967 370 aa1.73□□□□□ -2.13
ECHDC1-219ENST00000526299 OR6T1Q8NGN1 323 aa1.73□□□□□ -2.13
ECHDC1-219ENST00000526299 PTPMT1Q8WUK0 201 aaPredicted RBP1.73□□□□□ -2.13
ECHDC1-219ENST00000526299 C11orf52Q96A22 123 aa1.73□□□□□ -2.13
ECHDC1-219ENST00000526299 NABP1Q96AH0 204 aa1.73□□□□□ -2.13
ECHDC1-219ENST00000526299 NXNL1Q96CM4 212 aa1.73□□□□□ -2.13
ECHDC1-219ENST00000526299 PPP1R16AQ96I34 528 aa1.73□□□□□ -2.13
ECHDC1-219ENST00000526299 NEDD4LQ96PU5 975 aa1.73□□□□□ -2.13
ECHDC1-219ENST00000526299 DEFB126Q9BYW3 111 aa1.73□□□□□ -2.13
ECHDC1-219ENST00000526299 SLC35C2Q9NQQ7 365 aa1.73□□□□□ -2.13
ECHDC1-219ENST00000526299 RPS6KB2Q9UBS0 482 aa1.73□□□□□ -2.13
ECHDC1-219ENST00000526299 RSPH14Q9UHP6 348 aa1.73□□□□□ -2.13
ECHDC1-219ENST00000526299 GPR75-ASB3A0A0A6YYF3 556 aa1.72□□□□□ -2.13
ECHDC1-219ENST00000526299 TNFSF11O14788 317 aa1.72□□□□□ -2.13
ECHDC1-219ENST00000526299 ADAMDEC1O15204 470 aa1.72□□□□□ -2.13
ECHDC1-219ENST00000526299 TNFSF12O43508 249 aa1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms