RNA–Protein interactions for RNA: ENST00000526280.1

SMPD1-202, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,344 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-202ENST00000526280 RORAP35398 523 aa12.35□□□□□ -0.43
SMPD1-202ENST00000526280 BCL6P41182 706 aa12.35□□□□□ -0.43
SMPD1-202ENST00000526280 CASP2P42575 452 aa12.35□□□□□ -0.43
SMPD1-202ENST00000526280 ARSFP54793 590 aa12.35□□□□□ -0.43
SMPD1-202ENST00000526280 EMP3P54852 163 aa12.35□□□□□ -0.43
SMPD1-202ENST00000526280 NFKB2Q00653 900 aa12.35□□□□□ -0.43
SMPD1-202ENST00000526280 E2F2Q14209 437 aa12.35□□□□□ -0.43
SMPD1-202ENST00000526280 GRM7Q14831 915 aa12.35□□□□□ -0.43
SMPD1-202ENST00000526280 TBCCQ15814 346 aa12.35□□□□□ -0.43
SMPD1-202ENST00000526280 CCDC153Q494R4 210 aa12.35□□□□□ -0.43
SMPD1-202ENST00000526280 TNFAIP8L3Q5GJ75 292 aa12.35□□□□□ -0.43
SMPD1-202ENST00000526280 YOD1Q5VVQ6 348 aaPredicted RBP12.35□□□□□ -0.43
SMPD1-202ENST00000526280 RHBDD2Q6NTF9 364 aa12.35□□□□□ -0.43
SMPD1-202ENST00000526280 VN1R4Q7Z5H5 301 aa12.35□□□□□ -0.43
SMPD1-202ENST00000526280 CACNA2D3Q8IZS8 1091 aa12.35□□□□□ -0.43
SMPD1-202ENST00000526280 TBC1D19Q8N5T2 526 aa12.35□□□□□ -0.43
SMPD1-202ENST00000526280 TEX9Q8N6V9 391 aa12.35□□□□□ -0.43
SMPD1-202ENST00000526280 CSNK1A1LQ8N752 337 aa12.35□□□□□ -0.43
SMPD1-202ENST00000526280 GOLGA6L1Q8N7Z2 621 aa12.35□□□□□ -0.43
SMPD1-202ENST00000526280 MFSD9Q8NBP5 474 aa12.35□□□□□ -0.43
SMPD1-202ENST00000526280 CLIP3Q96DZ5 547 aa12.35□□□□□ -0.43
SMPD1-202ENST00000526280 TM4SF19Q96DZ7 209 aa12.35□□□□□ -0.43
SMPD1-202ENST00000526280 NAF1Q96HR8 494 aaKnown RBP12.35□□□□□ -0.43
SMPD1-202ENST00000526280 RUFY1Q96T51 708 aa12.35□□□□□ -0.43
SMPD1-202ENST00000526280 NDC1Q9BTX1 674 aa12.35□□□□□ -0.43
SMPD1-202ENST00000526280 PITHD1Q9GZP4 211 aaPredicted RBP12.35□□□□□ -0.43
SMPD1-202ENST00000526280 GEMIN8Q9NWZ8 242 aaKnown RBP12.35□□□□□ -0.43
SMPD1-202ENST00000526280 SENP1Q9P0U3 644 aa12.35□□□□□ -0.43
SMPD1-202ENST00000526280 PADI1Q9ULC6 663 aa12.35□□□□□ -0.43
SMPD1-202ENST00000526280 SRPK3Q9UPE1 567 aa12.35□□□□□ -0.43
SMPD1-202ENST00000526280 SSUH2Q9Y2M2 353 aa12.35□□□□□ -0.43
SMPD1-202ENST00000526280 A0A087WV48 116 aa12.34□□□□□ -0.43
SMPD1-202ENST00000526280 HYKKA2RU49 373 aa12.34□□□□□ -0.43
SMPD1-202ENST00000526280 G3V2L1 256 aa12.34□□□□□ -0.43
SMPD1-202ENST00000526280 MEN1O00255 615 aa12.34□□□□□ -0.43
SMPD1-202ENST00000526280 TXNDC9O14530 226 aa12.34□□□□□ -0.43
SMPD1-202ENST00000526280 P2RX6O15547 441 aa12.34□□□□□ -0.43
SMPD1-202ENST00000526280 OR1F1O43749 312 aa12.34□□□□□ -0.43
SMPD1-202ENST00000526280 WFS1O76024 890 aa12.34□□□□□ -0.43
SMPD1-202ENST00000526280 KLK3P07288 261 aaPredicted RBP12.34□□□□□ -0.43
SMPD1-202ENST00000526280 CCNYL3P0C7X3 344 aa12.34□□□□□ -0.43
SMPD1-202ENST00000526280 CREB1P16220 341 aa12.34□□□□□ -0.43
SMPD1-202ENST00000526280 CXCR2P25025 360 aa12.34□□□□□ -0.43
SMPD1-202ENST00000526280 AHRP35869 848 aa12.34□□□□□ -0.43
SMPD1-202ENST00000526280 SCTRP47872 440 aa12.34□□□□□ -0.43
SMPD1-202ENST00000526280 PIK3CGP48736 1102 aa12.34□□□□□ -0.43
SMPD1-202ENST00000526280 IRF8Q02556 426 aa12.34□□□□□ -0.43
SMPD1-202ENST00000526280 ABHD18Q0P651 414 aa12.34□□□□□ -0.43
SMPD1-202ENST00000526280 CHIT1Q13231 466 aa12.34□□□□□ -0.43
SMPD1-202ENST00000526280 GTF2H2Q13888 395 aa12.34□□□□□ -0.43
SMPD1-202ENST00000526280 DOC2AQ14183 400 aa12.34□□□□□ -0.43
SMPD1-202ENST00000526280 FAM214AQ32MH5 1076 aa12.34□□□□□ -0.43
SMPD1-202ENST00000526280 XKR6Q5GH73 641 aa12.34□□□□□ -0.43
SMPD1-202ENST00000526280 GTF2H2CQ6P1K8 395 aa12.34□□□□□ -0.43
SMPD1-202ENST00000526280 ZNF517Q6ZMY9 492 aaPredicted RBP12.34□□□□□ -0.43
SMPD1-202ENST00000526280 GOLGA7Q7Z5G4 137 aa12.34□□□□□ -0.43
SMPD1-202ENST00000526280 SLC22A9Q8IVM8 553 aa12.34□□□□□ -0.43
SMPD1-202ENST00000526280 DSELQ8IZU8 1212 aa12.34□□□□□ -0.43
SMPD1-202ENST00000526280 TTC29Q8NA56 475 aaPredicted RBP12.34□□□□□ -0.43
SMPD1-202ENST00000526280 PTCD3Q96EY7 689 aaKnown RBP12.34□□□□□ -0.43
SMPD1-202ENST00000526280 PGM2Q96G03 612 aa12.34□□□□□ -0.43
SMPD1-202ENST00000526280 APOPT1Q96IL0 206 aa12.34□□□□□ -0.43
SMPD1-202ENST00000526280 DCBLD2Q96PD2 775 aa12.34□□□□□ -0.43
SMPD1-202ENST00000526280 SMC6Q96SB8 1091 aa12.34□□□□□ -0.43
SMPD1-202ENST00000526280 C1QTNF3Q9BXJ4 246 aa12.34□□□□□ -0.43
SMPD1-202ENST00000526280 SLC7A5P2Q9GIP4 190 aa12.34□□□□□ -0.43
SMPD1-202ENST00000526280 C12orf65Q9H3J6 166 aaKnown RBP12.34□□□□□ -0.43
SMPD1-202ENST00000526280 NT5DC2Q9H857 520 aa12.34□□□□□ -0.43
SMPD1-202ENST00000526280 AKIRIN1Q9H9L7 192 aaPredicted RBP12.34□□□□□ -0.43
SMPD1-202ENST00000526280 LHX9Q9NQ69 397 aa12.34□□□□□ -0.43
SMPD1-202ENST00000526280 CUTCQ9NTM9 273 aa12.34□□□□□ -0.43
SMPD1-202ENST00000526280 COPG2Q9UBF2 871 aa12.34□□□□□ -0.43
SMPD1-202ENST00000526280 DHCR7Q9UBM7 475 aaKnown RBP12.34□□□□□ -0.43
SMPD1-202ENST00000526280 PCTPQ9UKL6 214 aa12.34□□□□□ -0.43
SMPD1-202ENST00000526280 RUVBL1Q9Y265 456 aaKnown RBP12.34□□□□□ -0.43
SMPD1-202ENST00000526280 PLLPQ9Y342 182 aa12.34□□□□□ -0.43
SMPD1-202ENST00000526280 ANGPTL3Q9Y5C1 460 aa12.34□□□□□ -0.43
SMPD1-202ENST00000526280 KMT2BQ9UMN6 2715 aaPredicted RBP12.33□□□□□ -0.44
SMPD1-202ENST00000526280 KLK10O43240 276 aa12.33□□□□□ -0.44
SMPD1-202ENST00000526280 SPAG7O75391 227 aa12.33□□□□□ -0.44
SMPD1-202ENST00000526280 KATNA1O75449 491 aa12.33□□□□□ -0.44
SMPD1-202ENST00000526280 MED26O95402 600 aa12.33□□□□□ -0.44
SMPD1-202ENST00000526280 RPS17P08708 135 aaKnown RBP12.33□□□□□ -0.44
SMPD1-202ENST00000526280 CD22P20273 847 aa12.33□□□□□ -0.44
SMPD1-202ENST00000526280 IMPDH1P20839 514 aa12.33□□□□□ -0.44
SMPD1-202ENST00000526280 STAT5AP42229 794 aa12.33□□□□□ -0.44
SMPD1-202ENST00000526280 ATP1A2P50993 1020 aa12.33□□□□□ -0.44
SMPD1-202ENST00000526280 PRKAA2P54646 552 aa12.33□□□□□ -0.44
SMPD1-202ENST00000526280 HERVK_113P63132 956 aa12.33□□□□□ -0.44
SMPD1-202ENST00000526280 LAPTM5Q13571 262 aa12.33□□□□□ -0.44
SMPD1-202ENST00000526280 SLBPQ14493 270 aaKnown RBP eCLIP12.33□□□□□ -0.44
SMPD1-202ENST00000526280 RBBP5Q15291 538 aaKnown RBP12.33□□□□□ -0.44
SMPD1-202ENST00000526280 HKDC1Q2TB90 917 aa12.33□□□□□ -0.44
SMPD1-202ENST00000526280 MANEAQ5SRI9 462 aa12.33□□□□□ -0.44
SMPD1-202ENST00000526280 GARNL3Q5VVW2 1013 aa12.33□□□□□ -0.44
SMPD1-202ENST00000526280 ZNF385CQ66K41 422 aaPredicted RBP12.33□□□□□ -0.44
SMPD1-202ENST00000526280 TMIGD1Q6UXZ0 262 aa12.33□□□□□ -0.44
SMPD1-202ENST00000526280 ZYG11AQ6WRX3 759 aa12.33□□□□□ -0.44
SMPD1-202ENST00000526280 TTLL10Q6ZVT0 673 aa12.33□□□□□ -0.44
SMPD1-202ENST00000526280 ASPGQ86U10 573 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms