RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 TNRC6BQ9UPQ9 1833 aaKnown RBP1.52□□□□□ -2.17
CD44-212ENST00000524922 UTP20O75691 2785 aaKnown RBP1.52□□□□□ -2.17
CD44-212ENST00000524922 IGLV3-22A0A075B6J6 115 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 IGHV1OR15-9A0A0B4J2B8 117 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 A0A1B0GTQ1 180 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 CXorf51AA0A1B0GTR3 108 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 DVL1O14640 695 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 LDLRAD4O15165 306 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 VILLO15195 856 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 SLC22A2O15244 555 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 ZNHIT1O43257 154 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 ANP32CO43423 234 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 SYNGR3O43761 229 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 SH3BP5O60239 455 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 TSPAN1O60635 241 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 JAK2O60674 1132 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 TACC1O75410 805 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 TADA2AO75478 443 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 ERLIN2O94905 339 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 REC8O95072 547 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 CCNE2O96020 404 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 IGLV1-44P01699 117 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 TFP02787 698 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 PRB1P04280 392 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 ADRB2P07550 413 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 FAM106CPP0CH98 169 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 CSH1P0DML2 217 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 CSH2P0DML3 217 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 LIPCP11150 499 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 CD1EP15812 388 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 CKMT2P17540 419 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 PBX3P40426 434 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 APOBEC1P41238 236 aaKnown RBP1.52□□□□□ -2.17
CD44-212ENST00000524922 CCR2P41597 374 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 PTGER3P43115 390 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 OR1G1P47890 313 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 ARCN1P48444 511 aaKnown RBP1.52□□□□□ -2.17
CD44-212ENST00000524922 ARRB1P49407 418 aaPredicted RBP1.52□□□□□ -2.17
CD44-212ENST00000524922 DVL1P1P54792 670 aaPredicted RBP1.52□□□□□ -2.17
CD44-212ENST00000524922 PSMC5P62195 406 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 SLC7A9P82251 487 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 EFNB1P98172 346 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 PDE1BQ01064 536 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 SRSF5Q13243 272 aaKnown RBP1.52□□□□□ -2.17
CD44-212ENST00000524922 ITGADQ13349 1161 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 DHX8Q14562 1220 aaKnown RBP1.52□□□□□ -2.17
CD44-212ENST00000524922 VEPH1Q14D04 833 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 PON2Q15165 354 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 TAF5Q15542 800 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 TAF11Q15544 211 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 ZNF77Q15935 545 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 DECR1Q16698 335 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 CFAP221Q4G0U5 840 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 MCMDC2Q4G0Z9 681 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 RAB6CQ53S08 254 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 SLC45A4Q5BKX6 768 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 ATF7IP2Q5U623 682 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 SNX30Q5VWJ9 437 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 FRG2Q64ET8 278 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 GALNT17Q6IS24 598 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 METTL2BQ6P1Q9 378 aaKnown RBP1.52□□□□□ -2.17
CD44-212ENST00000524922 TMEM81Q6P7N7 255 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 KCTD18Q6PI47 426 aaPredicted RBP1.52□□□□□ -2.17
CD44-212ENST00000524922 ALKAL1Q6UXT8 129 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 RSRC2Q7L4I2 434 aaKnown RBP1.52□□□□□ -2.17
CD44-212ENST00000524922 CATSPER4Q7RTX7 472 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 TADA2BQ86TJ2 420 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 MYLK4Q86YV6 388 aaPredicted RBP1.52□□□□□ -2.17
CD44-212ENST00000524922 CPOQ8IVL8 374 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 ARID3BQ8IVW6 561 aaPredicted RBP1.52□□□□□ -2.17
CD44-212ENST00000524922 CD302Q8IX05 232 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 C4orf19Q8IY42 314 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 FBXL16Q8N461 479 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 ARL14Q8N4G2 192 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 RBM15BQ8NDT2 890 aaKnown RBP1.52□□□□□ -2.17
CD44-212ENST00000524922 OR52I2Q8NH67 350 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 RPLP0P6Q8NHW5 317 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 SPPL2BQ8TCT7 592 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 SAP25Q8TEE9 199 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 SSC4DQ8WTU2 575 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 EVI5LQ96CN4 794 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 RRP36Q96EU6 259 aaKnown RBP1.52□□□□□ -2.17
CD44-212ENST00000524922 METTL2AQ96IZ6 378 aaKnown RBP1.52□□□□□ -2.17
CD44-212ENST00000524922 COG8Q96MW5 612 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 ZNF570Q96NI8 536 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 GCNAQ96QF7 691 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 CCNL2Q96S94 520 aaPredicted RBP1.52□□□□□ -2.17
CD44-212ENST00000524922 CD180Q99467 661 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 LGMNQ99538 433 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 MTERF1Q99551 399 aaKnown RBP1.52□□□□□ -2.17
CD44-212ENST00000524922 UBAC1Q9BSL1 405 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 FAM167BQ9BTA0 163 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 PLA2G2FQ9BZM2 168 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 RAB6CQ9H0N0 254 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 C2orf40Q9H1Z8 148 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 FZD8Q9H461 694 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 ECT2Q9H8V3 914 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 RIC8AQ9NPQ8 531 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 HPS4Q9NQG7 708 aa1.52□□□□□ -2.17
CD44-212ENST00000524922 ITM2CQ9NQX7 267 aa1.52□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms