RNA–Protein interactions for RNA: ENST00000522900.5

SPIDR-220, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 3

Gene SPIDR, Length 692 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-220ENST00000522900 LHPPQ9H008 270 aa17.73■□□□□ 0.43
SPIDR-220ENST00000522900 MKKSQ9NPJ1 570 aaPredicted RBP17.73■□□□□ 0.43
SPIDR-220ENST00000522900 MAP10Q9P2G4 905 aa17.73■□□□□ 0.43
SPIDR-220ENST00000522900 ANKRD12Q6UB98 2062 aa17.73■□□□□ 0.43
SPIDR-220ENST00000522900 NBASA2RRP1 2371 aa17.73■□□□□ 0.43
SPIDR-220ENST00000522900 RELNP78509 3460 aa17.73■□□□□ 0.43
SPIDR-220ENST00000522900 FAM95CA0A1B0GW59 222 aa17.72■□□□□ 0.43
SPIDR-220ENST00000522900 FAM187AA6NFU0 413 aa17.72■□□□□ 0.43
SPIDR-220ENST00000522900 MAP2K7O14733 419 aa17.72■□□□□ 0.43
SPIDR-220ENST00000522900 KLHL41O60662 606 aa17.72■□□□□ 0.43
SPIDR-220ENST00000522900 IPO13O94829 963 aaKnown RBP17.72■□□□□ 0.43
SPIDR-220ENST00000522900 HPP00738 406 aa17.72■□□□□ 0.43
SPIDR-220ENST00000522900 CCND1P24385 295 aa17.72■□□□□ 0.43
SPIDR-220ENST00000522900 SSTR1P30872 391 aa17.72■□□□□ 0.43
SPIDR-220ENST00000522900 NDUFA9Q16795 377 aa17.72■□□□□ 0.43
SPIDR-220ENST00000522900 CRB2Q5IJ48 1285 aa17.72■□□□□ 0.43
SPIDR-220ENST00000522900 AGAP7PQ5VUJ5 663 aa17.72■□□□□ 0.43
SPIDR-220ENST00000522900 TMEM214Q6NUQ4 689 aaKnown RBP17.72■□□□□ 0.43
SPIDR-220ENST00000522900 CUZD1Q86UP6 607 aa17.72■□□□□ 0.43
SPIDR-220ENST00000522900 SLC26A11Q86WA9 606 aa17.72■□□□□ 0.43
SPIDR-220ENST00000522900 CEP97Q8IW35 865 aa17.72■□□□□ 0.43
SPIDR-220ENST00000522900 ANKRD49Q8WVL7 239 aa17.72■□□□□ 0.43
SPIDR-220ENST00000522900 FBXL8Q96CD0 374 aa17.72■□□□□ 0.43
SPIDR-220ENST00000522900 THAP11Q96EK4 314 aa17.72■□□□□ 0.43
SPIDR-220ENST00000522900 AGAP4Q96P64 663 aa17.72■□□□□ 0.43
SPIDR-220ENST00000522900 MCMBPQ9BTE3 642 aa17.72■□□□□ 0.43
SPIDR-220ENST00000522900 TRIM54Q9BYV2 358 aa17.72■□□□□ 0.43
SPIDR-220ENST00000522900 GRHL1Q9NZI5 618 aa17.72■□□□□ 0.43
SPIDR-220ENST00000522900 OR2W5A6NFC9 320 aa17.71■□□□□ 0.43
SPIDR-220ENST00000522900 CXorf49A8MYA2 514 aaPredicted RBP17.71■□□□□ 0.43
SPIDR-220ENST00000522900 TCP11X1B4DZS4 312 aa17.71■□□□□ 0.43
SPIDR-220ENST00000522900 SGK494L7N484 410 aa17.71■□□□□ 0.43
SPIDR-220ENST00000522900 KLHL18O94889 574 aa17.71■□□□□ 0.43
SPIDR-220ENST00000522900 BMP10O95393 424 aa17.71■□□□□ 0.43
SPIDR-220ENST00000522900 HEXBP07686 556 aa17.71■□□□□ 0.43
SPIDR-220ENST00000522900 COX6A1P12074 109 aa17.71■□□□□ 0.43
SPIDR-220ENST00000522900 ZNF37AP17032 561 aaPredicted RBP17.71■□□□□ 0.43
SPIDR-220ENST00000522900 IL1RNP18510 177 aa17.71■□□□□ 0.43
SPIDR-220ENST00000522900 CASQ1P31415 396 aa17.71■□□□□ 0.43
SPIDR-220ENST00000522900 AVPR1BP47901 424 aa17.71■□□□□ 0.43
SPIDR-220ENST00000522900 AP1S2P56377 157 aa17.71■□□□□ 0.43
SPIDR-220ENST00000522900 EEF1A2Q05639 463 aaKnown RBP17.71■□□□□ 0.43
SPIDR-220ENST00000522900 PPP1R3AQ16821 1122 aa17.71■□□□□ 0.43
SPIDR-220ENST00000522900 CATSPEREQ5SY80 951 aa17.71■□□□□ 0.43
SPIDR-220ENST00000522900 IGFL2Q6UWQ7 119 aa17.71■□□□□ 0.43
SPIDR-220ENST00000522900 SYT10Q6XYQ8 523 aa17.71■□□□□ 0.43
SPIDR-220ENST00000522900 Q6ZS92 163 aa17.71■□□□□ 0.43
SPIDR-220ENST00000522900 ASPGQ86U10 573 aa17.71■□□□□ 0.43
SPIDR-220ENST00000522900 MFSD9Q8NBP5 474 aa17.71■□□□□ 0.43
SPIDR-220ENST00000522900 BBOF1Q8ND07 529 aa17.71■□□□□ 0.43
SPIDR-220ENST00000522900 ZNF740Q8NDX6 193 aa17.71■□□□□ 0.43
SPIDR-220ENST00000522900 ABHD11Q8NFV4 315 aa17.71■□□□□ 0.43
SPIDR-220ENST00000522900 OR4K1Q8NGD4 311 aa17.71■□□□□ 0.43
SPIDR-220ENST00000522900 ZCCHC10Q8TBK6 192 aa17.71■□□□□ 0.43
SPIDR-220ENST00000522900 PYROXD1Q8WU10 500 aa17.71■□□□□ 0.43
SPIDR-220ENST00000522900 SLC13A3Q8WWT9 602 aa17.71■□□□□ 0.43
SPIDR-220ENST00000522900 MOCOSQ96EN8 888 aa17.71■□□□□ 0.43
SPIDR-220ENST00000522900 VPS50Q96JG6 964 aa17.71■□□□□ 0.43
SPIDR-220ENST00000522900 HAUS8Q9BT25 410 aa17.71■□□□□ 0.43
SPIDR-220ENST00000522900 SPNS1Q9H2V7 528 aa17.71■□□□□ 0.43
SPIDR-220ENST00000522900 SAYSD1Q9NPB0 183 aa17.71■□□□□ 0.43
SPIDR-220ENST00000522900 C14orf105Q9NVL8 296 aa17.71■□□□□ 0.43
SPIDR-220ENST00000522900 ASF1BQ9NVP2 202 aa17.71■□□□□ 0.43
SPIDR-220ENST00000522900 WHRNQ9P202 907 aa17.71■□□□□ 0.43
SPIDR-220ENST00000522900 MKL2Q9ULH7 1088 aa17.71■□□□□ 0.43
SPIDR-220ENST00000522900 MTO1Q9Y2Z2 717 aaKnown RBP17.71■□□□□ 0.43
SPIDR-220ENST00000522900 HEATR5BQ9P2D3 2071 aa17.7■□□□□ 0.42
SPIDR-220ENST00000522900 IGHV1-45A0A0A0MS14 117 aa17.7■□□□□ 0.42
SPIDR-220ENST00000522900 NSG1A0A0A6YYJ2 146 aa17.7■□□□□ 0.42
SPIDR-220ENST00000522900 NPEPPSL1A6NEC2 478 aa17.7■□□□□ 0.42
SPIDR-220ENST00000522900 H0YIG0 161 aa17.7■□□□□ 0.42
SPIDR-220ENST00000522900 CELA2AP08217 269 aa17.7■□□□□ 0.42
SPIDR-220ENST00000522900 ETF1P62495 437 aaKnown RBP17.7■□□□□ 0.42
SPIDR-220ENST00000522900 MRPL49Q13405 166 aaKnown RBP17.7■□□□□ 0.42
SPIDR-220ENST00000522900 TRADDQ15628 312 aa17.7■□□□□ 0.42
SPIDR-220ENST00000522900 LINC00696Q6ZRV3 163 aa17.7■□□□□ 0.42
SPIDR-220ENST00000522900 NDUFAF7Q7L592 441 aa17.7■□□□□ 0.42
SPIDR-220ENST00000522900 MAATS1Q7Z4T9 603 aa17.7■□□□□ 0.42
SPIDR-220ENST00000522900 PDSS2Q86YH6 399 aa17.7■□□□□ 0.42
SPIDR-220ENST00000522900 IQCKQ8N0W5 287 aa17.7■□□□□ 0.42
SPIDR-220ENST00000522900 FAM26EQ8N5C1 309 aa17.7■□□□□ 0.42
SPIDR-220ENST00000522900 CAMKVQ8NCB2 501 aa17.7■□□□□ 0.42
SPIDR-220ENST00000522900 TM9SF4Q92544 642 aa17.7■□□□□ 0.42
SPIDR-220ENST00000522900 NEIL2Q969S2 332 aa17.7■□□□□ 0.42
SPIDR-220ENST00000522900 ILKAPQ9H0C8 392 aaPredicted RBP17.7■□□□□ 0.42
SPIDR-220ENST00000522900 CAB39LQ9H9S4 337 aa17.7■□□□□ 0.42
SPIDR-220ENST00000522900 HCN3Q9P1Z3 774 aa17.7■□□□□ 0.42
SPIDR-220ENST00000522900 NOVA2Q9UNW9 492 aaKnown RBP17.7■□□□□ 0.42
SPIDR-220ENST00000522900 HECTD1Q9ULT8 2610 aa17.69■□□□□ 0.42
SPIDR-220ENST00000522900 CTAGE15A4D2H0 777 aa17.69■□□□□ 0.42
SPIDR-220ENST00000522900 PABPN1LA6NDY0 278 aaKnown RBP17.69■□□□□ 0.42
SPIDR-220ENST00000522900 OR1F1O43749 312 aa17.69■□□□□ 0.42
SPIDR-220ENST00000522900 DNAJB6O75190 326 aa17.69■□□□□ 0.42
SPIDR-220ENST00000522900 NSA2O95478 260 aaKnown RBP17.69■□□□□ 0.42
SPIDR-220ENST00000522900 ENO2P09104 434 aaPredicted RBP17.69■□□□□ 0.42
SPIDR-220ENST00000522900 CXCR2P25025 360 aa17.69■□□□□ 0.42
SPIDR-220ENST00000522900 GLRBP48167 497 aa17.69■□□□□ 0.42
SPIDR-220ENST00000522900 CCR8P51685 355 aa17.69■□□□□ 0.42
SPIDR-220ENST00000522900 CALCOCO2Q13137 446 aa17.69■□□□□ 0.42
SPIDR-220ENST00000522900 C18orf21Q32NC0 220 aaPredicted RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms