RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 ARSIQ5FYB1 569 aa13.42□□□□□ -0.26
SYNPO-205ENST00000522122 DCAF4L2Q8NA75 395 aa13.42□□□□□ -0.26
SYNPO-205ENST00000522122 OR8J3Q8NGG0 315 aa13.42□□□□□ -0.26
SYNPO-205ENST00000522122 CMTM7Q96FZ5 175 aa13.42□□□□□ -0.26
SYNPO-205ENST00000522122 SCLYQ96I15 445 aa13.42□□□□□ -0.26
SYNPO-205ENST00000522122 HSH2DQ96JZ2 352 aa13.42□□□□□ -0.26
SYNPO-205ENST00000522122 ZNF354BQ96LW1 612 aa13.42□□□□□ -0.26
SYNPO-205ENST00000522122 PSKH2Q96QS6 385 aa13.42□□□□□ -0.26
SYNPO-205ENST00000522122 TM9SF3Q9HD45 589 aa13.42□□□□□ -0.26
SYNPO-205ENST00000522122 HAPLN1P10915 354 aaPredicted RBP13.42□□□□□ -0.26
SYNPO-205ENST00000522122 HOXA11P31270 313 aaPredicted RBP13.42□□□□□ -0.26
SYNPO-205ENST00000522122 CYP4V2Q6ZWL3 525 aaPredicted RBP13.42□□□□□ -0.26
SYNPO-205ENST00000522122 OR10H4Q8NGA5 316 aa13.42□□□□□ -0.26
SYNPO-205ENST00000522122 TRUB1Q8WWH5 349 aaKnown RBP13.42□□□□□ -0.26
SYNPO-205ENST00000522122 KLHL6Q8WZ60 621 aa13.42□□□□□ -0.26
SYNPO-205ENST00000522122 USP3Q9Y6I4 520 aa13.42□□□□□ -0.26
SYNPO-205ENST00000522122 TLR4O00206 839 aa13.41□□□□□ -0.26
SYNPO-205ENST00000522122 H1F0P07305 194 aaKnown RBP13.41□□□□□ -0.26
SYNPO-205ENST00000522122 ZNF182P17025 639 aaPredicted RBP13.41□□□□□ -0.26
SYNPO-205ENST00000522122 HSD17B2P37059 387 aa13.41□□□□□ -0.26
SYNPO-205ENST00000522122 PRAMEF14Q5SWL7 426 aa13.41□□□□□ -0.26
SYNPO-205ENST00000522122 TPRG1LQ5T0D9 272 aa13.41□□□□□ -0.26
SYNPO-205ENST00000522122 PRAMEF13Q5VWM6 474 aa13.41□□□□□ -0.26
SYNPO-205ENST00000522122 JAZF1Q86VZ6 243 aa13.41□□□□□ -0.26
SYNPO-205ENST00000522122 GSTO2Q9H4Y5 243 aa13.41□□□□□ -0.26
SYNPO-205ENST00000522122 ELL3Q9HB65 397 aaPredicted RBP13.41□□□□□ -0.26
SYNPO-205ENST00000522122 OR2B6P58173 313 aa13.41□□□□□ -0.26
SYNPO-205ENST00000522122 KCNAB2Q13303 367 aa13.41□□□□□ -0.26
SYNPO-205ENST00000522122 AGTRAPQ6RW13 159 aa13.41□□□□□ -0.26
SYNPO-205ENST00000522122 MFSD2AQ8NA29 543 aa13.41□□□□□ -0.26
SYNPO-205ENST00000522122 RBM18Q96H35 190 aaKnown RBP13.41□□□□□ -0.26
SYNPO-205ENST00000522122 RIMKLBQ9ULI2 386 aa13.41□□□□□ -0.26
SYNPO-205ENST00000522122 KLK1P06870 262 aa13.41□□□□□ -0.26
SYNPO-205ENST00000522122 KIAA1614Q5VZ46 1190 aa13.41□□□□□ -0.26
SYNPO-205ENST00000522122 Q6ZVU0 165 aa13.41□□□□□ -0.26
SYNPO-205ENST00000522122 GET4Q7L5D6 327 aaPredicted RBP13.41□□□□□ -0.26
SYNPO-205ENST00000522122 WFIKKN2Q8TEU8 576 aa13.41□□□□□ -0.26
SYNPO-205ENST00000522122 LMLNQ96KR4 655 aa13.41□□□□□ -0.26
SYNPO-205ENST00000522122 MAPKAP1Q9BPZ7 522 aa13.41□□□□□ -0.26
SYNPO-205ENST00000522122 CCM2Q9BSQ5 444 aa13.41□□□□□ -0.26
SYNPO-205ENST00000522122 AGPAT4Q9NRZ5 378 aa13.41□□□□□ -0.26
SYNPO-205ENST00000522122 LTBP3Q9NS15 1303 aa13.41□□□□□ -0.26
SYNPO-205ENST00000522122 DUXAA6NLW8 204 aa13.41□□□□□ -0.26
SYNPO-205ENST00000522122 H3BMQ9 156 aa13.41□□□□□ -0.26
SYNPO-205ENST00000522122 CLDN4O14493 209 aa13.41□□□□□ -0.26
SYNPO-205ENST00000522122 CNMDO75829 334 aa13.41□□□□□ -0.26
SYNPO-205ENST00000522122 MPIP34949 423 aa13.41□□□□□ -0.26
SYNPO-205ENST00000522122 CCR8P51685 355 aa13.41□□□□□ -0.26
SYNPO-205ENST00000522122 NCBP2P52298 156 aaKnown RBP eCLIP13.41□□□□□ -0.26
SYNPO-205ENST00000522122 ILF3Q12906 894 aaKnown RBP eCLIP13.41□□□□□ -0.26
SYNPO-205ENST00000522122 CRHR2Q13324 411 aa13.41□□□□□ -0.26
SYNPO-205ENST00000522122 UPP1Q16831 310 aa13.41□□□□□ -0.26
SYNPO-205ENST00000522122 LRRC66Q68CR7 880 aa13.41□□□□□ -0.26
SYNPO-205ENST00000522122 FRRS1Q6ZNA5 592 aa13.41□□□□□ -0.26
SYNPO-205ENST00000522122 LILRA2Q8N149 483 aa13.41□□□□□ -0.26
SYNPO-205ENST00000522122 ZCCHC10Q8TBK6 192 aa13.41□□□□□ -0.26
SYNPO-205ENST00000522122 KCTD7Q96MP8 289 aa13.41□□□□□ -0.26
SYNPO-205ENST00000522122 COG8Q96MW5 612 aa13.41□□□□□ -0.26
SYNPO-205ENST00000522122 MIR1-1HGQ9H1L0 117 aa13.41□□□□□ -0.26
SYNPO-205ENST00000522122 MALT1Q9UDY8 824 aa13.41□□□□□ -0.26
SYNPO-205ENST00000522122 DNAJC15Q9Y5T4 150 aa13.41□□□□□ -0.26
SYNPO-205ENST00000522122 PTGDR2Q9Y5Y4 395 aa13.41□□□□□ -0.26
SYNPO-205ENST00000522122 FAM172BPA6NC97 362 aa13.4□□□□□ -0.26
SYNPO-205ENST00000522122 XKRYO14609 159 aa13.4□□□□□ -0.26
SYNPO-205ENST00000522122 HMGN1P05114 100 aa13.4□□□□□ -0.26
SYNPO-205ENST00000522122 ALPPP05187 535 aa13.4□□□□□ -0.26
SYNPO-205ENST00000522122 TFPTP0C1Z6 253 aa13.4□□□□□ -0.26
SYNPO-205ENST00000522122 CSNK2A2P19784 350 aaPredicted RBP13.4□□□□□ -0.26
SYNPO-205ENST00000522122 CPN2P22792 545 aa13.4□□□□□ -0.26
SYNPO-205ENST00000522122 FAM129CQ86XR2 697 aa13.4□□□□□ -0.26
SYNPO-205ENST00000522122 NPAS3Q8IXF0 933 aa13.4□□□□□ -0.26
SYNPO-205ENST00000522122 NXPE1Q8N323 547 aa13.4□□□□□ -0.26
SYNPO-205ENST00000522122 TTLQ8NG68 377 aa13.4□□□□□ -0.26
SYNPO-205ENST00000522122 P2RX2Q9UBL9 471 aa13.4□□□□□ -0.26
SYNPO-205ENST00000522122 TMEM88BA6NKF7 163 aa13.4□□□□□ -0.26
SYNPO-205ENST00000522122 PORP16435 677 aaPredicted RBP13.4□□□□□ -0.26
SYNPO-205ENST00000522122 ZNF30P17039 623 aa13.4□□□□□ -0.26
SYNPO-205ENST00000522122 PTGR1Q14914 329 aa13.4□□□□□ -0.26
SYNPO-205ENST00000522122 TOMM20Q15388 145 aa13.4□□□□□ -0.26
SYNPO-205ENST00000522122 ZNF404Q494X3 552 aa13.4□□□□□ -0.26
SYNPO-205ENST00000522122 CMTM8Q8IZV2 173 aa13.4□□□□□ -0.26
SYNPO-205ENST00000522122 RNASE11Q8TAA1 199 aaKnown RBP13.4□□□□□ -0.26
SYNPO-205ENST00000522122 GAB3Q8WWW8 586 aa13.4□□□□□ -0.26
SYNPO-205ENST00000522122 TMEM175Q9BSA9 504 aa13.4□□□□□ -0.26
SYNPO-205ENST00000522122 TMLHEQ9NVH6 421 aa13.4□□□□□ -0.26
SYNPO-205ENST00000522122 UNCXA6NJT0 531 aa13.4□□□□□ -0.26
SYNPO-205ENST00000522122 RASGRP1O95267 797 aa13.4□□□□□ -0.26
SYNPO-205ENST00000522122 INHAP05111 366 aa13.4□□□□□ -0.26
SYNPO-205ENST00000522122 GPX3P22352 226 aa13.4□□□□□ -0.26
SYNPO-205ENST00000522122 SLC5A2P31639 672 aa13.4□□□□□ -0.26
SYNPO-205ENST00000522122 AP3S2P59780 193 aa13.4□□□□□ -0.26
SYNPO-205ENST00000522122 LAPTM4AQ15012 233 aa13.4□□□□□ -0.26
SYNPO-205ENST00000522122 NDUFA9Q16795 377 aa13.4□□□□□ -0.26
SYNPO-205ENST00000522122 OR8H1Q8NGG4 311 aa13.4□□□□□ -0.26
SYNPO-205ENST00000522122 DMRTB1Q96MA1 342 aa13.4□□□□□ -0.26
SYNPO-205ENST00000522122 C1QTNF1Q9BXJ1 281 aa13.4□□□□□ -0.26
SYNPO-205ENST00000522122 WDR6Q9NNW5 1121 aaKnown RBP13.4□□□□□ -0.26
SYNPO-205ENST00000522122 CCDC59Q9P031 241 aaKnown RBP13.4□□□□□ -0.26
SYNPO-205ENST00000522122 CKLFQ9UBR5 152 aa13.4□□□□□ -0.26
SYNPO-205ENST00000522122 MSRAQ9UJ68 235 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms