RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 OR2A25A4D2G3 310 aa20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 EME2A4GXA9 379 aaPredicted RBP20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 FOXE1O00358 373 aaPredicted RBP20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 LSM1O15116 133 aaKnown RBP20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 UBDO15205 165 aa20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 TGFB1P01137 390 aa20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 LMNAP02545 664 aaKnown RBP20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 SERPINA6P08185 405 aa20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 HSD3B1P14060 373 aa20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 HOXB3P14651 431 aaPredicted RBP20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 HSD3B2P26439 372 aa20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 GRK6P43250 576 aa20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 SCTRP47872 440 aa20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 GPLD1P80108 840 aa20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 CYP4F3Q08477 520 aa20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 PROX2Q3B8N5 592 aa20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 C6orf136Q5SQH8 315 aa20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 PERM1Q5SV97 790 aa20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 FOXR1Q6PIV2 292 aa20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 USP53Q70EK8 1073 aa20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 SPRED1Q7Z699 444 aa20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 FNDC5Q8NAU1 212 aa20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 NAT6Q93015 286 aa20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 EDEM2Q9BV94 578 aa20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 LRTM1Q9HBL6 345 aa20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 CACNA1EQ15878 2313 aa20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 EBAG9O00559 213 aa20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 GFRA3O60609 400 aa20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 PRAMEF10O60809 474 aa20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 SEC22BO75396 215 aa20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 RSL1D1O76021 490 aaKnown RBP20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 SERPIND1P05546 499 aa20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 PRR35P0CG20 571 aa20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 CKMT1AP12532 417 aa20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 CD1CP29017 333 aa20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 SERPINB1P30740 379 aa20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 DUSP3P51452 185 aaPredicted RBP20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 GFERP55789 205 aa20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 TRPM8Q7Z2W7 1104 aa20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 VN1R5Q7Z5H4 357 aa20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 TTLQ8NG68 377 aa20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 BAHD1Q8TBE0 780 aaPredicted RBP20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 MAP3K3Q99759 626 aa20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 RAB33BQ9H082 229 aa20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 C1orf109Q9NX04 203 aa20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 VPS29Q9UBQ0 182 aa20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 EPHA6Q9UF33 1036 aa20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 ZFP69BQ9UJL9 534 aa20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 KLK4Q9Y5K2 254 aa20.48■□□□□ 0.87
R3HCC1-208ENST00000522012 ADAMTS9Q9P2N4 1935 aa20.47■□□□□ 0.87
R3HCC1-208ENST00000522012 SLC9B1P1A6NJY1 282 aa20.47■□□□□ 0.87
R3HCC1-208ENST00000522012 CDX4O14627 284 aaPredicted RBP20.47■□□□□ 0.87
R3HCC1-208ENST00000522012 KIF1CO43896 1103 aaKnown RBP20.47■□□□□ 0.87
R3HCC1-208ENST00000522012 EZRP15311 586 aaKnown RBP20.47■□□□□ 0.87
R3HCC1-208ENST00000522012 ST6GAL1P15907 406 aa20.47■□□□□ 0.87
R3HCC1-208ENST00000522012 NBL1P41271 181 aa20.47■□□□□ 0.87
R3HCC1-208ENST00000522012 RPS15AP62244 130 aaKnown RBP20.47■□□□□ 0.87
R3HCC1-208ENST00000522012 FBXO42Q6P3S6 717 aa20.47■□□□□ 0.87
R3HCC1-208ENST00000522012 DBX2Q6ZNG2 339 aa20.47■□□□□ 0.87
R3HCC1-208ENST00000522012 SPATA19Q7Z5L4 167 aa20.47■□□□□ 0.87
R3HCC1-208ENST00000522012 PLXDC1Q8IUK5 500 aa20.47■□□□□ 0.87
R3HCC1-208ENST00000522012 FITM2Q8N6M3 262 aa20.47■□□□□ 0.87
R3HCC1-208ENST00000522012 MFSD9Q8NBP5 474 aa20.47■□□□□ 0.87
R3HCC1-208ENST00000522012 RHBDD1Q8TEB9 315 aa20.47■□□□□ 0.87
R3HCC1-208ENST00000522012 ERP27Q96DN0 273 aa20.47■□□□□ 0.87
R3HCC1-208ENST00000522012 CMTM7Q96FZ5 175 aa20.47■□□□□ 0.87
R3HCC1-208ENST00000522012 TRAPPC9Q96Q05 1148 aa20.47■□□□□ 0.87
R3HCC1-208ENST00000522012 CCDC3Q9BQI4 270 aa20.47■□□□□ 0.87
R3HCC1-208ENST00000522012 OR51B5Q9H339 312 aa20.47■□□□□ 0.87
R3HCC1-208ENST00000522012 SAR1AQ9NR31 198 aa20.47■□□□□ 0.87
R3HCC1-208ENST00000522012 C1GALT1Q9NS00 363 aa20.47■□□□□ 0.87
R3HCC1-208ENST00000522012 RXFP3Q9NSD7 469 aa20.47■□□□□ 0.87
R3HCC1-208ENST00000522012 NMRK1Q9NWW6 199 aa20.47■□□□□ 0.87
R3HCC1-208ENST00000522012 ARMCX1Q9P291 453 aa20.47■□□□□ 0.87
R3HCC1-208ENST00000522012 KLHL3Q9UH77 587 aa20.47■□□□□ 0.87
R3HCC1-208ENST00000522012 CCT8L1PA6NM43 557 aa20.46■□□□□ 0.87
R3HCC1-208ENST00000522012 FLRT2O43155 660 aa20.46■□□□□ 0.87
R3HCC1-208ENST00000522012 CTSVO60911 334 aa20.46■□□□□ 0.87
R3HCC1-208ENST00000522012 ETHE1O95571 254 aa20.46■□□□□ 0.87
R3HCC1-208ENST00000522012 PTX3P26022 381 aaPredicted RBP20.46■□□□□ 0.87
R3HCC1-208ENST00000522012 ERVK-8P63133 956 aa20.46■□□□□ 0.87
R3HCC1-208ENST00000522012 RPL38P63173 70 aaKnown RBP20.46■□□□□ 0.87
R3HCC1-208ENST00000522012 UBAP2LQ14157 1087 aaKnown RBP20.46■□□□□ 0.87
R3HCC1-208ENST00000522012 ZIC1Q15915 447 aa20.46■□□□□ 0.87
R3HCC1-208ENST00000522012 CSRP2Q16527 193 aa20.46■□□□□ 0.87
R3HCC1-208ENST00000522012 RFTN2Q52LD8 501 aaPredicted RBP20.46■□□□□ 0.87
R3HCC1-208ENST00000522012 OGFOD2Q6N063 350 aa20.46■□□□□ 0.87
R3HCC1-208ENST00000522012 CHSY3Q70JA7 882 aa20.46■□□□□ 0.87
R3HCC1-208ENST00000522012 IFI44Q8TCB0 444 aa20.46■□□□□ 0.87
R3HCC1-208ENST00000522012 CNDP2Q96KP4 475 aaKnown RBP20.46■□□□□ 0.87
R3HCC1-208ENST00000522012 FCRL4Q96PJ5 515 aa20.46■□□□□ 0.87
R3HCC1-208ENST00000522012 SERPINI1Q99574 410 aa20.46■□□□□ 0.87
R3HCC1-208ENST00000522012 C1orf50Q9BV19 199 aa20.46■□□□□ 0.87
R3HCC1-208ENST00000522012 SARGQ9BW04 601 aa20.46■□□□□ 0.87
R3HCC1-208ENST00000522012 MYLK2Q9H1R3 596 aa20.46■□□□□ 0.87
R3HCC1-208ENST00000522012 TMEM9BQ9NQ34 198 aa20.46■□□□□ 0.87
R3HCC1-208ENST00000522012 PCDHGA4Q9Y5G9 962 aa20.46■□□□□ 0.87
R3HCC1-208ENST00000522012 A0A0J9YVX5 310 aa20.45■□□□□ 0.86
R3HCC1-208ENST00000522012 RASSF9O75901 435 aa20.45■□□□□ 0.86
R3HCC1-208ENST00000522012 LDOC1O95751 146 aaPredicted RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms