RNA–Protein interactions for RNA: ENST00000521951.1

PVT1-212, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best) BASIC

Gene PVT1, Length 1,535 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-212ENST00000521951 MFSD9Q8NBP5 474 aa23.12■■□□□ 1.29
PVT1-212ENST00000521951 OR7G3Q8NG95 312 aa23.12■■□□□ 1.29
PVT1-212ENST00000521951 METTL6Q8TCB7 284 aa23.12■■□□□ 1.29
PVT1-212ENST00000521951 UBE2E3Q969T4 207 aa23.12■■□□□ 1.29
PVT1-212ENST00000521951 THAP11Q96EK4 314 aa23.12■■□□□ 1.29
PVT1-212ENST00000521951 OCIAD1Q9NX40 245 aa23.12■■□□□ 1.29
PVT1-212ENST00000521951 ZDHHC2Q9UIJ5 367 aa23.12■■□□□ 1.29
PVT1-212ENST00000521951 PLCL2Q9UPR0 1127 aa23.12■■□□□ 1.29
PVT1-212ENST00000521951 TIMM22Q9Y584 194 aa23.12■■□□□ 1.29
PVT1-212ENST00000521951 PCDHGA11Q9Y5H2 935 aa23.12■■□□□ 1.29
PVT1-212ENST00000521951 SPTBP11277 2137 aa23.11■■□□□ 1.29
PVT1-212ENST00000521951 LOC105369274A0A096LPK9 316 aa23.11■■□□□ 1.29
PVT1-212ENST00000521951 LOC102723532A0A0G2JNH3 316 aa23.11■■□□□ 1.29
PVT1-212ENST00000521951 SNUPNO95149 360 aaKnown RBP23.11■■□□□ 1.29
PVT1-212ENST00000521951 FGF4P08620 206 aa23.11■■□□□ 1.29
PVT1-212ENST00000521951 GYS2P54840 703 aa23.11■■□□□ 1.29
PVT1-212ENST00000521951 OCRLQ01968 901 aa23.11■■□□□ 1.29
PVT1-212ENST00000521951 GPR19Q15760 415 aa23.11■■□□□ 1.29
PVT1-212ENST00000521951 RGS9BPQ6ZS82 235 aa23.11■■□□□ 1.29
PVT1-212ENST00000521951 OR4N4Q8N0Y3 316 aa23.11■■□□□ 1.29
PVT1-212ENST00000521951 LIN37Q96GY3 246 aaPredicted RBP23.11■■□□□ 1.29
PVT1-212ENST00000521951 SLC29A3Q9BZD2 475 aa23.11■■□□□ 1.29
PVT1-212ENST00000521951 ILKAPQ9H0C8 392 aaPredicted RBP23.11■■□□□ 1.29
PVT1-212ENST00000521951 SIDT1Q9NXL6 827 aaKnown RBP23.11■■□□□ 1.29
PVT1-212ENST00000521951 EPB41L3Q9Y2J2 1087 aaPredicted RBP23.11■■□□□ 1.29
PVT1-212ENST00000521951 RAP2CQ9Y3L5 183 aa23.11■■□□□ 1.29
PVT1-212ENST00000521951 H0YGG7 62 aa23.1■■□□□ 1.29
PVT1-212ENST00000521951 AZIN1O14977 448 aa23.1■■□□□ 1.29
PVT1-212ENST00000521951 MSL3P1P0C860 447 aa23.1■■□□□ 1.29
PVT1-212ENST00000521951 HMOX2P30519 316 aa23.1■■□□□ 1.29
PVT1-212ENST00000521951 AHRP35869 848 aa23.1■■□□□ 1.29
PVT1-212ENST00000521951 ARF3P61204 181 aaPredicted RBP23.1■■□□□ 1.29
PVT1-212ENST00000521951 PUM1Q14671 1186 aaKnown RBP eCLIP23.1■■□□□ 1.29
PVT1-212ENST00000521951 SH2D4BQ5SQS7 431 aa23.1■■□□□ 1.29
PVT1-212ENST00000521951 TTC19Q6DKK2 380 aaPredicted RBP23.1■■□□□ 1.29
PVT1-212ENST00000521951 CLEC6AQ6EIG7 209 aa23.1■■□□□ 1.29
PVT1-212ENST00000521951 ADNP2Q6IQ32 1131 aa23.1■■□□□ 1.29
PVT1-212ENST00000521951 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP23.1■■□□□ 1.29
PVT1-212ENST00000521951 ZNF781Q8N8C0 355 aa23.1■■□□□ 1.29
PVT1-212ENST00000521951 AGR3Q8TD06 166 aa23.1■■□□□ 1.29
PVT1-212ENST00000521951 RHBGQ9H310 441 aa23.1■■□□□ 1.29
PVT1-212ENST00000521951 AKAP7Q9P0M2 348 aaPredicted RBP23.1■■□□□ 1.29
PVT1-212ENST00000521951 ZFP69BQ9UJL9 534 aa23.1■■□□□ 1.29
PVT1-212ENST00000521951 TRAF6Q9Y4K3 522 aa23.1■■□□□ 1.29
PVT1-212ENST00000521951 AP1M2Q9Y6Q5 423 aa23.1■■□□□ 1.29
PVT1-212ENST00000521951 EFCAB7A8K855 629 aa23.09■■□□□ 1.29
PVT1-212ENST00000521951 POLR3GO15318 223 aaPredicted RBP23.09■■□□□ 1.29
PVT1-212ENST00000521951 CRCPO75575 148 aa23.09■■□□□ 1.29
PVT1-212ENST00000521951 CTSBP07858 339 aa23.09■■□□□ 1.29
PVT1-212ENST00000521951 UROSP10746 265 aa23.09■■□□□ 1.29
PVT1-212ENST00000521951 PCNAP12004 261 aa23.09■■□□□ 1.29
PVT1-212ENST00000521951 SERPINB3P29508 390 aa23.09■■□□□ 1.29
PVT1-212ENST00000521951 VSX2P58304 361 aaPredicted RBP23.09■■□□□ 1.29
PVT1-212ENST00000521951 ACY1Q03154 408 aa23.09■■□□□ 1.29
PVT1-212ENST00000521951 TARDBPQ13148 414 aaKnown RBP eCLIP23.09■■□□□ 1.292e-6■■■■□ 22.2
PVT1-212ENST00000521951 TCHHL1Q5QJ38 904 aaPredicted RBP23.09■■□□□ 1.29
PVT1-212ENST00000521951 FRG2Q64ET8 278 aa23.09■■□□□ 1.29
PVT1-212ENST00000521951 VN1R5Q7Z5H4 357 aa23.09■■□□□ 1.29
PVT1-212ENST00000521951 VN1R4Q7Z5H5 301 aa23.09■■□□□ 1.29
PVT1-212ENST00000521951 CLYBLQ8N0X4 340 aa23.09■■□□□ 1.29
PVT1-212ENST00000521951 WDR20Q8TBZ3 569 aa23.09■■□□□ 1.29
PVT1-212ENST00000521951 N4BP2L2Q92802 583 aaPredicted RBP23.09■■□□□ 1.29
PVT1-212ENST00000521951 REPS1Q96D71 796 aa23.09■■□□□ 1.29
PVT1-212ENST00000521951 MTFMTQ96DP5 389 aaKnown RBP23.09■■□□□ 1.29
PVT1-212ENST00000521951 FRG2BQ96QU4 278 aa23.09■■□□□ 1.29
PVT1-212ENST00000521951 CMKLR1Q99788 373 aa23.09■■□□□ 1.29
PVT1-212ENST00000521951 SLCO1B3Q9NPD5 702 aa23.09■■□□□ 1.29
PVT1-212ENST00000521951 FGF21Q9NSA1 209 aa23.09■■□□□ 1.29
PVT1-212ENST00000521951 HAO1Q9UJM8 370 aa23.09■■□□□ 1.29
PVT1-212ENST00000521951 SNX6Q9UNH7 406 aa23.09■■□□□ 1.29
PVT1-212ENST00000521951 FIS1Q9Y3D6 152 aa23.09■■□□□ 1.29
PVT1-212ENST00000521951 TSC22D4Q9Y3Q8 395 aa23.09■■□□□ 1.29
PVT1-212ENST00000521951 FAM149AA5PLN7 773 aa23.08■■□□□ 1.29
PVT1-212ENST00000521951 ANKDD1BA6NHY2 528 aa23.08■■□□□ 1.29
PVT1-212ENST00000521951 TMEM233B4DJY2 109 aa23.08■■□□□ 1.29
PVT1-212ENST00000521951 MANBAO00462 879 aa23.08■■□□□ 1.29
PVT1-212ENST00000521951 SRPX2O60687 465 aaPredicted RBP23.08■■□□□ 1.29
PVT1-212ENST00000521951 CCL4P13236 92 aa23.08■■□□□ 1.29
PVT1-212ENST00000521951 NEK2P51955 445 aa23.08■■□□□ 1.29
PVT1-212ENST00000521951 RAB11FIP2Q7L804 512 aa23.08■■□□□ 1.29
PVT1-212ENST00000521951 GALNT15Q8N3T1 639 aa23.08■■□□□ 1.29
PVT1-212ENST00000521951 CHCHD4Q8N4Q1 142 aa23.08■■□□□ 1.29
PVT1-212ENST00000521951 BMPERQ8N8U9 685 aa23.08■■□□□ 1.29
PVT1-212ENST00000521951 TTLQ8NG68 377 aa23.08■■□□□ 1.29
PVT1-212ENST00000521951 RERGQ96A58 199 aaPredicted RBP23.08■■□□□ 1.29
PVT1-212ENST00000521951 ZNF501Q96CX3 271 aaPredicted RBP23.08■■□□□ 1.29
PVT1-212ENST00000521951 TM4SF19Q96DZ7 209 aa23.08■■□□□ 1.29
PVT1-212ENST00000521951 OR6C1Q96RD1 312 aa23.08■■□□□ 1.29
PVT1-212ENST00000521951 ELOVL6Q9H5J4 265 aa23.08■■□□□ 1.29
PVT1-212ENST00000521951 LOXL2Q9Y4K0 774 aa23.08■■□□□ 1.29
PVT1-212ENST00000521951 CCDC187A0A096LP49 1063 aa23.08■■□□□ 1.28
PVT1-212ENST00000521951 TMEM150CB9EJG8 249 aa23.08■■□□□ 1.28
PVT1-212ENST00000521951 KRT6AP02538 564 aa23.08■■□□□ 1.28
PVT1-212ENST00000521951 STATHP02808 62 aa23.08■■□□□ 1.28
PVT1-212ENST00000521951 KRT6BP04259 564 aa23.08■■□□□ 1.28
PVT1-212ENST00000521951 KRT6CP48668 564 aa23.08■■□□□ 1.28
PVT1-212ENST00000521951 CYP4F2P78329 520 aa23.08■■□□□ 1.28
PVT1-212ENST00000521951 FOXM1Q08050 763 aa23.08■■□□□ 1.28
PVT1-212ENST00000521951 IFT88Q13099 833 aa23.08■■□□□ 1.28
PVT1-212ENST00000521951 TUBB3Q13509 450 aa23.08■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms