RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 GOLGA4Q13439 2230 aaKnown RBP15.72■□□□□ 0.11
USP42-207ENST00000521713 CCRL2O00421 344 aa15.72■□□□□ 0.11
USP42-207ENST00000521713 SIX3O95343 332 aaPredicted RBP15.72■□□□□ 0.11
USP42-207ENST00000521713 AZGP1P25311 298 aaKnown RBP15.72■□□□□ 0.11
USP42-207ENST00000521713 RYKP34925 604 aa15.72■□□□□ 0.11
USP42-207ENST00000521713 SLC15A1P46059 708 aa15.72■□□□□ 0.11
USP42-207ENST00000521713 NCBP2P52298 156 aaKnown RBP eCLIP15.72■□□□□ 0.111e-6■□□□□ 9.8
USP42-207ENST00000521713 C10orf62Q5T681 223 aaPredicted RBP15.72■□□□□ 0.11
USP42-207ENST00000521713 TMIGD1Q6UXZ0 262 aa15.72■□□□□ 0.11
USP42-207ENST00000521713 ZNF358Q9NW07 568 aa15.72■□□□□ 0.11
USP42-207ENST00000521713 SLC17A6Q9P2U8 582 aa15.72■□□□□ 0.11
USP42-207ENST00000521713 ISPDA4D126 451 aa15.72■□□□□ 0.11
USP42-207ENST00000521713 FAM189A1O60320 539 aa15.72■□□□□ 0.11
USP42-207ENST00000521713 ADAMTS4O75173 837 aa15.72■□□□□ 0.11
USP42-207ENST00000521713 HNF1BP35680 557 aa15.72■□□□□ 0.11
USP42-207ENST00000521713 CASRP41180 1078 aa15.72■□□□□ 0.11
USP42-207ENST00000521713 VIPR2P41587 438 aa15.72■□□□□ 0.11
USP42-207ENST00000521713 BDKRB1P46663 353 aa15.72■□□□□ 0.11
USP42-207ENST00000521713 PTCHD3Q3KNS1 767 aa15.72■□□□□ 0.11
USP42-207ENST00000521713 PM20D1Q6GTS8 502 aa15.72■□□□□ 0.11
USP42-207ENST00000521713 POMZP3Q6PJE2 187 aa15.72■□□□□ 0.11
USP42-207ENST00000521713 TIFABQ6ZNK6 161 aa15.72■□□□□ 0.11
USP42-207ENST00000521713 C12orf43Q96C57 262 aaKnown RBP15.72■□□□□ 0.11
USP42-207ENST00000521713 ART5Q96L15 291 aa15.72■□□□□ 0.11
USP42-207ENST00000521713 DMRTB1Q96MA1 342 aa15.72■□□□□ 0.11
USP42-207ENST00000521713 ZNF347Q96SE7 839 aa15.72■□□□□ 0.11
USP42-207ENST00000521713 LRRC3Q9BY71 257 aa15.72■□□□□ 0.11
USP42-207ENST00000521713 SERTAD3Q9UJW9 196 aa15.72■□□□□ 0.11
USP42-207ENST00000521713 PCDHGA2Q9Y5H1 932 aa15.72■□□□□ 0.11
USP42-207ENST00000521713 CFAP20Q9Y6A4 193 aaKnown RBP15.72■□□□□ 0.11
USP42-207ENST00000521713 CDC7O00311 574 aa15.71■□□□□ 0.11
USP42-207ENST00000521713 NDUFS4O43181 175 aa15.71■□□□□ 0.11
USP42-207ENST00000521713 VEGFDO43915 354 aa15.71■□□□□ 0.11
USP42-207ENST00000521713 LINGO3P0C6S8 592 aa15.71■□□□□ 0.11
USP42-207ENST00000521713 GKP32189 559 aa15.71■□□□□ 0.11
USP42-207ENST00000521713 ARHGDIBP52566 201 aa15.71■□□□□ 0.11
USP42-207ENST00000521713 MARCH8Q5T0T0 291 aa15.71■□□□□ 0.11
USP42-207ENST00000521713 JAZF1Q86VZ6 243 aa15.71■□□□□ 0.11
USP42-207ENST00000521713 CCDC28AQ8IWP9 274 aa15.71■□□□□ 0.11
USP42-207ENST00000521713 GPR65Q8IYL9 337 aa15.71■□□□□ 0.11
USP42-207ENST00000521713 SLC5A11Q8WWX8 675 aa15.71■□□□□ 0.11
USP42-207ENST00000521713 MOCS1Q9NZB8 636 aa15.71■□□□□ 0.11
USP42-207ENST00000521713 CD207Q9UJ71 328 aa15.71■□□□□ 0.11
USP42-207ENST00000521713 ABCG2Q9UNQ0 655 aa15.71■□□□□ 0.11
USP42-207ENST00000521713 PLCH1Q4KWH8 1693 aa15.71■□□□□ 0.11
USP42-207ENST00000521713 MYH1P12882 1939 aa15.71■□□□□ 0.11
USP42-207ENST00000521713 ACADLP28330 430 aa15.71■□□□□ 0.11
USP42-207ENST00000521713 ZNF517Q6ZMY9 492 aaPredicted RBP15.71■□□□□ 0.11
USP42-207ENST00000521713 MAPK15Q8TD08 544 aa15.71■□□□□ 0.11
USP42-207ENST00000521713 TNFAIP8L1Q8WVP5 186 aa15.71■□□□□ 0.11
USP42-207ENST00000521713 GALPQ9UBC7 116 aa15.71■□□□□ 0.11
USP42-207ENST00000521713 CYTH4Q9UIA0 394 aa15.71■□□□□ 0.11
USP42-207ENST00000521713 EBLN1P0CF75 366 aa15.71■□□□□ 0.11
USP42-207ENST00000521713 NR4A1P22736 598 aa15.71■□□□□ 0.11
USP42-207ENST00000521713 MAZP56270 477 aaKnown RBP15.71■□□□□ 0.11
USP42-207ENST00000521713 IFI44LQ53G44 452 aa15.71■□□□□ 0.11
USP42-207ENST00000521713 OR10A6Q8NH74 314 aa15.71■□□□□ 0.11
USP42-207ENST00000521713 PIGXQ8TBF5 258 aa15.71■□□□□ 0.11
USP42-207ENST00000521713 FNDC8Q8TC99 324 aa15.71■□□□□ 0.11
USP42-207ENST00000521713 PGAP3Q96FM1 320 aaPredicted RBP15.71■□□□□ 0.11
USP42-207ENST00000521713 NELL2Q99435 816 aa15.71■□□□□ 0.11
USP42-207ENST00000521713 CDADC1Q9BWV3 514 aa15.71■□□□□ 0.11
USP42-207ENST00000521713 ITM2AO43736 263 aa15.71■□□□□ 0.1
USP42-207ENST00000521713 TMBIM6P55061 237 aa15.71■□□□□ 0.1
USP42-207ENST00000521713 GNG2P59768 71 aa15.71■□□□□ 0.1
USP42-207ENST00000521713 MAB21L1Q13394 359 aa15.71■□□□□ 0.1
USP42-207ENST00000521713 KLHL22Q53GT1 634 aa15.71■□□□□ 0.1
USP42-207ENST00000521713 CASD1Q96PB1 797 aa15.71■□□□□ 0.1
USP42-207ENST00000521713 IL1RAPQ9NPH3 570 aa15.71■□□□□ 0.1
USP42-207ENST00000521713 OAS3Q9Y6K5 1087 aaKnown RBP15.71■□□□□ 0.1
USP42-207ENST00000521713 C4AP0C0L4 1744 aa15.7■□□□□ 0.1
USP42-207ENST00000521713 CXCR6O00574 342 aa15.7■□□□□ 0.1
USP42-207ENST00000521713 ACOX3O15254 700 aa15.7■□□□□ 0.1
USP42-207ENST00000521713 GIMD1P0DJR0 217 aa15.7■□□□□ 0.1
USP42-207ENST00000521713 ANXA8P13928 327 aa15.7■□□□□ 0.1
USP42-207ENST00000521713 C5AR1P21730 350 aa15.7■□□□□ 0.1
USP42-207ENST00000521713 ERP29P30040 261 aaKnown RBP15.7■□□□□ 0.1
USP42-207ENST00000521713 MYBPC1Q00872 1141 aa15.7■□□□□ 0.1
USP42-207ENST00000521713 RPL6Q02878 288 aaKnown RBP15.7■□□□□ 0.1
USP42-207ENST00000521713 TIGD6Q17RP2 521 aa15.7■□□□□ 0.1
USP42-207ENST00000521713 C6orf183Q5T699 404 aa15.7■□□□□ 0.1
USP42-207ENST00000521713 RPTNQ6XPR3 784 aa15.7■□□□□ 0.1
USP42-207ENST00000521713 LRRTM3Q86VH5 581 aa15.7■□□□□ 0.1
USP42-207ENST00000521713 ZNF784Q8NCA9 323 aaPredicted RBP15.7■□□□□ 0.1
USP42-207ENST00000521713 NCSTNQ92542 709 aa15.7■□□□□ 0.1
USP42-207ENST00000521713 DCSTAMPQ9H295 470 aa15.7■□□□□ 0.1
USP42-207ENST00000521713 TMLHEQ9NVH6 421 aa15.7■□□□□ 0.1
USP42-207ENST00000521713 SLCO3A1Q9UIG8 710 aa15.7■□□□□ 0.1
USP42-207ENST00000521713 MYH13Q9UKX3 1938 aa15.7■□□□□ 0.1
USP42-207ENST00000521713 NAV1Q8NEY1 1877 aa15.7■□□□□ 0.1
USP42-207ENST00000521713 A0A1W2PQU0 124 aa15.7■□□□□ 0.1
USP42-207ENST00000521713 TEX46H3BTG2 121 aa15.7■□□□□ 0.1
USP42-207ENST00000521713 DLX3O60479 287 aa15.7■□□□□ 0.1
USP42-207ENST00000521713 RNGTTO60942 597 aaKnown RBP15.7■□□□□ 0.1
USP42-207ENST00000521713 GPX6P59796 221 aa15.7■□□□□ 0.1
USP42-207ENST00000521713 TMEM214Q6NUQ4 689 aaKnown RBP15.7■□□□□ 0.1
USP42-207ENST00000521713 ZNF773Q6PK81 442 aa15.7■□□□□ 0.1
USP42-207ENST00000521713 TMCO2Q7Z6W1 182 aaPredicted RBP15.7■□□□□ 0.1
USP42-207ENST00000521713 ZDHHC21Q8IVQ6 265 aa15.7■□□□□ 0.1
USP42-207ENST00000521713 SUN3Q8TAQ9 357 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms