RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 STAG3L1P0CL83 205 aa3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 ALPPL2P10696 532 aa3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 GOT1P17174 413 aa3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 CCNA2P20248 432 aa3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 CDH3P22223 829 aa3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 AHCYP23526 432 aa3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 ACP1P24666 158 aa3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 OR1D2P34982 312 aa3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 IL15P40933 162 aaPredicted RBP3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 RABIFP47224 123 aa3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 HOXA1P49639 335 aaPredicted RBP3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 NT5C2P49902 561 aa3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 CLCN4P51793 760 aa3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 AKAP17AQ02040 695 aaKnown RBP3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 ARL16Q0P5N6 197 aa3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 TRAP1Q12931 704 aaKnown RBP3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 PDK1Q15118 436 aa3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 RBBP7Q16576 425 aa3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 NADSYN1Q6IA69 706 aa3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 NEK5Q6P3R8 708 aa3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 PHLDB2Q86SQ0 1253 aa3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 NOA1Q8NC60 698 aaKnown RBP3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 KIAA0895Q8NCT3 520 aa3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 HPSE2Q8WWQ2 592 aa3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 SLC13A3Q8WWT9 602 aa3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 SLCO4A1Q96BD0 722 aa3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 ZBTB9Q96C00 473 aa3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 AP2M1Q96CW1 435 aa3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 DTD2Q96FN9 168 aa3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 LYZL4Q96KX0 146 aa3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 C4orf45Q96LM5 186 aa3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 DUX5Q96PT3 197 aa3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 PSD2Q9BQI7 771 aa3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 ALKBH7Q9BT30 221 aaPredicted RBP3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 MIS12Q9H081 205 aa3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 CARD9Q9H257 536 aa3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 TFB2MQ9H5Q4 396 aaKnown RBP3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 EGLN3Q9H6Z9 239 aa3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 AKIRIN1Q9H9L7 192 aaPredicted RBP3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 ZNF556Q9HAH1 456 aa3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 FAM207AQ9NSI2 230 aaPredicted RBP3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 ZKSCAN7Q9P0L1 754 aaPredicted RBP3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 MOSPD1Q9UJG1 213 aa3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 AGTPBP1Q9UPW5 1226 aa3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 RUVBL2Q9Y230 463 aaKnown RBP3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 ZNF510Q9Y2H8 683 aa3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 MTF2Q9Y483 593 aaPredicted RBP3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 ATP6V0A2Q9Y487 856 aa3.09□□□□□ -1.91
HMGN1P28-201ENST00000521340 SMCHD1A6NHR9 2005 aa3.09□□□□□ -1.92
HMGN1P28-201ENST00000521340 IGHV4-61A0A0C4DH41 118 aa3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 KPNA7A9QM74 516 aa3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 CACNB4O00305 520 aaPredicted RBP3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 SCO2O43819 266 aa3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 RAD51DO75771 328 aa3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 KRT33AO76009 404 aa3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 NGFP01138 241 aa3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 IGHV4-59P01825 116 aa3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 UMODP07911 640 aa3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 MMP10P09238 476 aa3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 MYL6BP14649 208 aa3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 DARSP14868 501 aaKnown RBP3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 CYP3A5P20815 502 aa3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 IL10P22301 178 aa3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 RPA1P27694 616 aa3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 CDC25AP30304 524 aa3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 SSTR1P30872 391 aa3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 CSTF2P33240 577 aaKnown RBP eCLIP3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 LUMP51884 338 aaPredicted RBP3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 SMSP52788 366 aa3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 ATXN3P54252 364 aaPredicted RBP3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 SRSF9Q13242 221 aaKnown RBP eCLIP3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 RBM39Q14498 530 aaKnown RBP3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 SQLEQ14534 574 aa3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 ASPRV1Q53RT3 343 aa3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 DNAJC21Q5F1R6 531 aaKnown RBP3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 PDSS1Q5T2R2 415 aa3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 LRRC38Q5VT99 294 aa3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 IRAK1BP1Q5VVH5 260 aa3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 OR4C11Q6IEV9 310 aa3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 C9orf139Q6ZV77 190 aa3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 COX8CQ7Z4L0 72 aa3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 SAMD14Q8IZD0 417 aaPredicted RBP3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 HDDC3Q8N4P3 179 aa3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 RFLNBQ8N5W9 214 aa3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 ZNF383Q8NA42 475 aa3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 SIDT2Q8NBJ9 832 aaKnown RBP3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 CNNM3Q8NE01 707 aa3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 OR1L3Q8NH93 324 aa3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 UBLCP1Q8WVY7 318 aaPredicted RBP3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 MED30Q96HR3 178 aa3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 IGSF21Q96ID5 467 aa3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 MARK4Q96L34 752 aa3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 C10orf90Q96M02 699 aa3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 TSGA13Q96PP4 275 aa3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 DPEP3Q9H4B8 488 aa3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 ATP13A3Q9H7F0 1226 aa3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 ZFP57Q9NU63 452 aa3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 INTS9Q9NV88 658 aaKnown RBP3.08□□□□□ -1.92
HMGN1P28-201ENST00000521340 PSORS1C1Q9UIG5 152 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms