RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 RIF1Q5UIP0 2472 aaKnown RBP17.03■□□□□ 0.32
SDC2-205ENST00000520233 UNC13CQ8NB66 2214 aa17.03■□□□□ 0.32
SDC2-205ENST00000520233 FFAR3O14843 346 aa17.03■□□□□ 0.32
SDC2-205ENST00000520233 AZIN1O14977 448 aa17.03■□□□□ 0.32
SDC2-205ENST00000520233 GPR42O15529 346 aa17.03■□□□□ 0.32
SDC2-205ENST00000520233 SRPX2O60687 465 aaPredicted RBP17.03■□□□□ 0.32
SDC2-205ENST00000520233 CRCPO75575 148 aa17.03■□□□□ 0.32
SDC2-205ENST00000520233 FOLR1P15328 257 aa17.03■□□□□ 0.32
SDC2-205ENST00000520233 SERPINB1P30740 379 aa17.03■□□□□ 0.32
SDC2-205ENST00000520233 FOXA1P55317 472 aa17.03■□□□□ 0.32
SDC2-205ENST00000520233 CYP4F3Q08477 520 aa17.03■□□□□ 0.32
SDC2-205ENST00000520233 KCNAB1Q14722 419 aa17.03■□□□□ 0.32
SDC2-205ENST00000520233 SH2D4BQ5SQS7 431 aa17.03■□□□□ 0.32
SDC2-205ENST00000520233 C10orf62Q5T681 223 aaPredicted RBP17.03■□□□□ 0.32
SDC2-205ENST00000520233 TTC19Q6DKK2 380 aaPredicted RBP17.03■□□□□ 0.32
SDC2-205ENST00000520233 MCATQ8IVS2 390 aaKnown RBP17.03■□□□□ 0.32
SDC2-205ENST00000520233 ZNF781Q8N8C0 355 aa17.03■□□□□ 0.32
SDC2-205ENST00000520233 ANKRD53Q8N9V6 530 aa17.03■□□□□ 0.32
SDC2-205ENST00000520233 WDR20Q8TBZ3 569 aa17.03■□□□□ 0.32
SDC2-205ENST00000520233 LIN37Q96GY3 246 aaPredicted RBP17.03■□□□□ 0.32
SDC2-205ENST00000520233 PRR11Q96HE9 360 aaPredicted RBP17.03■□□□□ 0.32
SDC2-205ENST00000520233 C7orf26Q96N11 449 aa17.03■□□□□ 0.32
SDC2-205ENST00000520233 FCRL4Q96PJ5 515 aa17.03■□□□□ 0.32
SDC2-205ENST00000520233 KCNA7Q96RP8 456 aa17.03■□□□□ 0.32
SDC2-205ENST00000520233 RHBGQ9H310 441 aa17.03■□□□□ 0.32
SDC2-205ENST00000520233 SIDT1Q9NXL6 827 aaKnown RBP17.03■□□□□ 0.32
SDC2-205ENST00000520233 AKAP7Q9P0M2 348 aaPredicted RBP17.03■□□□□ 0.32
SDC2-205ENST00000520233 ADGRE2Q9UHX3 823 aa17.03■□□□□ 0.32
SDC2-205ENST00000520233 ZFP69BQ9UJL9 534 aa17.03■□□□□ 0.32
SDC2-205ENST00000520233 TIMM22Q9Y584 194 aa17.03■□□□□ 0.32
SDC2-205ENST00000520233 ANKDD1BA6NHY2 528 aa17.02■□□□□ 0.32
SDC2-205ENST00000520233 POLR3GO15318 223 aaPredicted RBP17.02■□□□□ 0.32
SDC2-205ENST00000520233 HCRTR1O43613 425 aa17.02■□□□□ 0.32
SDC2-205ENST00000520233 KRT6AP02538 564 aa17.02■□□□□ 0.32
SDC2-205ENST00000520233 KRT6BP04259 564 aa17.02■□□□□ 0.32
SDC2-205ENST00000520233 PCNAP12004 261 aa17.02■□□□□ 0.32
SDC2-205ENST00000520233 KRT6CP48668 564 aa17.02■□□□□ 0.32
SDC2-205ENST00000520233 RPL14P50914 215 aaKnown RBP17.02■□□□□ 0.32
SDC2-205ENST00000520233 ACY1Q03154 408 aa17.02■□□□□ 0.32
SDC2-205ENST00000520233 ZNF33BQ06732 778 aa17.02■□□□□ 0.32
SDC2-205ENST00000520233 IFT88Q13099 833 aa17.02■□□□□ 0.32
SDC2-205ENST00000520233 DEFB110Q30KQ9 67 aa17.02■□□□□ 0.32
SDC2-205ENST00000520233 KANK2Q63ZY3 851 aa17.02■□□□□ 0.32
SDC2-205ENST00000520233 FRG2Q64ET8 278 aa17.02■□□□□ 0.32
SDC2-205ENST00000520233 CLEC6AQ6EIG7 209 aa17.02■□□□□ 0.32
SDC2-205ENST00000520233 FRMPD2BQ6IN97 320 aa17.02■□□□□ 0.32
SDC2-205ENST00000520233 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.02■□□□□ 0.32
SDC2-205ENST00000520233 TRPV3Q8NET8 790 aa17.02■□□□□ 0.32
SDC2-205ENST00000520233 N4BP2L2Q92802 583 aaPredicted RBP17.02■□□□□ 0.32
SDC2-205ENST00000520233 FRG2BQ96QU4 278 aa17.02■□□□□ 0.32
SDC2-205ENST00000520233 CMKLR1Q99788 373 aa17.02■□□□□ 0.32
SDC2-205ENST00000520233 SYNPO2LQ9H987 977 aa17.02■□□□□ 0.32
SDC2-205ENST00000520233 GVINP1Q7Z2Y8 2422 aa17.01■□□□□ 0.31
SDC2-205ENST00000520233 LOC105369274A0A096LPK9 316 aa17.01■□□□□ 0.31
SDC2-205ENST00000520233 LOC102723532A0A0G2JNH3 316 aa17.01■□□□□ 0.31
SDC2-205ENST00000520233 EFCAB7A8K855 629 aa17.01■□□□□ 0.31
SDC2-205ENST00000520233 TCP11X1B4DZS4 312 aa17.01■□□□□ 0.31
SDC2-205ENST00000520233 H0YGG7 62 aa17.01■□□□□ 0.31
SDC2-205ENST00000520233 MANBAO00462 879 aa17.01■□□□□ 0.31
SDC2-205ENST00000520233 PIK3CBP42338 1070 aa17.01■□□□□ 0.31
SDC2-205ENST00000520233 GYS2P54840 703 aa17.01■□□□□ 0.31
SDC2-205ENST00000520233 ARF3P61204 181 aaPredicted RBP17.01■□□□□ 0.31
SDC2-205ENST00000520233 PHEXP78562 749 aa17.01■□□□□ 0.31
SDC2-205ENST00000520233 PUM1Q14671 1186 aaKnown RBP eCLIP17.01■□□□□ 0.31
SDC2-205ENST00000520233 GPR19Q15760 415 aa17.01■□□□□ 0.31
SDC2-205ENST00000520233 UGT3A2Q3SY77 523 aa17.01■□□□□ 0.31
SDC2-205ENST00000520233 CYB5D1Q6P9G0 228 aa17.01■□□□□ 0.31
SDC2-205ENST00000520233 VN1R4Q7Z5H5 301 aa17.01■□□□□ 0.31
SDC2-205ENST00000520233 ASPGQ86U10 573 aa17.01■□□□□ 0.31
SDC2-205ENST00000520233 CRLF3Q8IUI8 442 aa17.01■□□□□ 0.31
SDC2-205ENST00000520233 OR4N4Q8N0Y3 316 aa17.01■□□□□ 0.31
SDC2-205ENST00000520233 GALNT15Q8N3T1 639 aa17.01■□□□□ 0.31
SDC2-205ENST00000520233 HUS1BQ8NHY5 278 aa17.01■□□□□ 0.31
SDC2-205ENST00000520233 AGR3Q8TD06 166 aa17.01■□□□□ 0.31
SDC2-205ENST00000520233 ZNF473Q8WTR7 871 aaKnown RBP17.01■□□□□ 0.31
SDC2-205ENST00000520233 RERGQ96A58 199 aaPredicted RBP17.01■□□□□ 0.31
SDC2-205ENST00000520233 TM4SF19Q96DZ7 209 aa17.01■□□□□ 0.31
SDC2-205ENST00000520233 ZNF285Q96NJ3 590 aa17.01■□□□□ 0.31
SDC2-205ENST00000520233 ELOVL6Q9H5J4 265 aa17.01■□□□□ 0.31
SDC2-205ENST00000520233 FANCEQ9HB96 536 aa17.01■□□□□ 0.31
SDC2-205ENST00000520233 SLCO1B3Q9NPD5 702 aa17.01■□□□□ 0.31
SDC2-205ENST00000520233 ENAMQ9NRM1 1142 aa17.01■□□□□ 0.31
SDC2-205ENST00000520233 FGF21Q9NSA1 209 aa17.01■□□□□ 0.31
SDC2-205ENST00000520233 OCIAD1Q9NX40 245 aa17.01■□□□□ 0.31
SDC2-205ENST00000520233 PSD3Q9NYI0 1048 aa17.01■□□□□ 0.31
SDC2-205ENST00000520233 SNRNP200O75643 2136 aaKnown RBP17■□□□□ 0.31
SDC2-205ENST00000520233 CCDC187A0A096LP49 1063 aa17■□□□□ 0.31
SDC2-205ENST00000520233 SERTM1A2A2V5 107 aa17■□□□□ 0.31
SDC2-205ENST00000520233 TMEM233B4DJY2 109 aa17■□□□□ 0.31
SDC2-205ENST00000520233 B4E171 279 aa17■□□□□ 0.31
SDC2-205ENST00000520233 FOXE1O00358 373 aaPredicted RBP17■□□□□ 0.31
SDC2-205ENST00000520233 ULK1O75385 1050 aa17■□□□□ 0.31
SDC2-205ENST00000520233 CLEC3AO75596 197 aa17■□□□□ 0.31
SDC2-205ENST00000520233 CHEK2O96017 543 aa17■□□□□ 0.31
SDC2-205ENST00000520233 SERPINB3P29508 390 aa17■□□□□ 0.31
SDC2-205ENST00000520233 TSPAN7P41732 249 aa17■□□□□ 0.31
SDC2-205ENST00000520233 NEK2P51955 445 aa17■□□□□ 0.31
SDC2-205ENST00000520233 VSX2P58304 361 aaPredicted RBP17■□□□□ 0.31
SDC2-205ENST00000520233 EIF3IQ13347 325 aaKnown RBP17■□□□□ 0.31
SDC2-205ENST00000520233 TUBB3Q13509 450 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms